RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 SLAIN1Q8ND83 568 aa23.58■■□□□ 1.37
PNKP-211ENST00000598020 PIGSQ96S52 555 aa23.58■■□□□ 1.37
PNKP-211ENST00000598020 APBA2Q99767 749 aa23.58■■□□□ 1.37
PNKP-211ENST00000598020 AMNQ9BXJ7 453 aa23.58■■□□□ 1.37
PNKP-211ENST00000598020 ABCB11O95342 1321 aa23.58■■□□□ 1.36
PNKP-211ENST00000598020 ADCY3O60266 1144 aa23.57■■□□□ 1.36
PNKP-211ENST00000598020 CYP2B6P20813 491 aa23.57■■□□□ 1.36
PNKP-211ENST00000598020 CDC27P30260 824 aa23.57■■□□□ 1.36
PNKP-211ENST00000598020 CLEC4DQ8WXI8 215 aa23.57■■□□□ 1.36
PNKP-211ENST00000598020 RRP36Q96EU6 259 aaKnown RBP23.57■■□□□ 1.36
PNKP-211ENST00000598020 HOMER2Q9NSB8 354 aa23.57■■□□□ 1.36
PNKP-211ENST00000598020 SLC5A4Q9NY91 659 aa23.57■■□□□ 1.36
PNKP-211ENST00000598020 NAP1L2Q9ULW6 460 aaPredicted RBP23.57■■□□□ 1.36
PNKP-211ENST00000598020 DIS3Q9Y2L1 958 aaKnown RBP23.57■■□□□ 1.36
PNKP-211ENST00000598020 DNAJC25-GNG10A0A024R161 153 aa23.56■■□□□ 1.36
PNKP-211ENST00000598020 PPP1R11O60927 126 aaPredicted RBP23.56■■□□□ 1.36
PNKP-211ENST00000598020 COBLO75128 1261 aa23.56■■□□□ 1.36
PNKP-211ENST00000598020 GRK4P32298 578 aa23.56■■□□□ 1.36
PNKP-211ENST00000598020 AK2P54819 239 aa23.56■■□□□ 1.36
PNKP-211ENST00000598020 MUM1L1Q5H9M0 696 aa23.56■■□□□ 1.36
PNKP-211ENST00000598020 DPP9Q86TI2 863 aa23.56■■□□□ 1.36
PNKP-211ENST00000598020 RGS22Q8NE09 1264 aa23.56■■□□□ 1.36
PNKP-211ENST00000598020 PFASO15067 1338 aa23.56■■□□□ 1.36
PNKP-211ENST00000598020 IGHA2P01877 340 aa23.55■■□□□ 1.36
PNKP-211ENST00000598020 ADD1P35611 737 aaKnown RBP23.55■■□□□ 1.36
PNKP-211ENST00000598020 HOMER1Q86YM7 354 aa23.55■■□□□ 1.36
PNKP-211ENST00000598020 CMTR1Q8N1G2 835 aaKnown RBP23.55■■□□□ 1.36
PNKP-211ENST00000598020 ANKRD35Q8N283 1001 aa23.55■■□□□ 1.36
PNKP-211ENST00000598020 ARMC5Q96C12 935 aa23.55■■□□□ 1.36
PNKP-211ENST00000598020 A1CFQ9NQ94 594 aaKnown RBP23.55■■□□□ 1.36
PNKP-211ENST00000598020 CNTNAP5Q8WYK1 1306 aa23.55■■□□□ 1.36
PNKP-211ENST00000598020 TAL1P17542 331 aaPredicted RBP23.54■■□□□ 1.36
PNKP-211ENST00000598020 RABEP1Q15276 862 aa23.54■■□□□ 1.36
PNKP-211ENST00000598020 ZNF792Q3KQV3 632 aa23.54■■□□□ 1.36
PNKP-211ENST00000598020 USH1GQ495M9 461 aa23.54■■□□□ 1.36
PNKP-211ENST00000598020 SLC9C1Q4G0N8 1177 aa23.54■■□□□ 1.36
PNKP-211ENST00000598020 TNS4Q8IZW8 715 aa23.54■■□□□ 1.36
PNKP-211ENST00000598020 NPLOC4Q8TAT6 608 aa23.54■■□□□ 1.36
PNKP-211ENST00000598020 DDX11Q96FC9 970 aa23.54■■□□□ 1.36
PNKP-211ENST00000598020 SEC63Q9UGP8 760 aaKnown RBP23.54■■□□□ 1.36
PNKP-211ENST00000598020 TPCN1Q9ULQ1 816 aa23.54■■□□□ 1.36
PNKP-211ENST00000598020 MRPL11Q9Y3B7 192 aaKnown RBP23.54■■□□□ 1.36
PNKP-211ENST00000598020 PCDHA1Q9Y5I3 950 aa23.54■■□□□ 1.36
PNKP-211ENST00000598020 NFIBO00712 420 aa23.53■■□□□ 1.36
PNKP-211ENST00000598020 NTRK3Q16288 839 aa23.53■■□□□ 1.36
PNKP-211ENST00000598020 LARP6Q9BRS8 491 aaKnown RBP23.53■■□□□ 1.36
PNKP-211ENST00000598020 CYP39A1Q9NYL5 469 aa23.53■■□□□ 1.36
PNKP-211ENST00000598020 PLXNA1Q9UIW2 1896 aa23.53■■□□□ 1.36
PNKP-211ENST00000598020 PFKFB2O60825 505 aa23.52■■□□□ 1.36
PNKP-211ENST00000598020 PGK2P07205 417 aa23.52■■□□□ 1.36
PNKP-211ENST00000598020 ELNP15502 786 aa23.52■■□□□ 1.36
PNKP-211ENST00000598020 GHRHRQ02643 423 aa23.52■■□□□ 1.36
PNKP-211ENST00000598020 OLFML2BQ68BL8 750 aa23.52■■□□□ 1.36
PNKP-211ENST00000598020 MCF2L2Q86YR7 1114 aa23.52■■□□□ 1.36
PNKP-211ENST00000598020 CCDC82Q8N4S0 544 aa23.52■■□□□ 1.36
PNKP-211ENST00000598020 SAMD3Q8N6K7 520 aa23.52■■□□□ 1.36
PNKP-211ENST00000598020 FAM133AQ8N9E0 248 aa23.52■■□□□ 1.36
PNKP-211ENST00000598020 TRIB2Q92519 343 aa23.52■■□□□ 1.36
PNKP-211ENST00000598020 HMGCRP04035 888 aa23.51■■□□□ 1.35
PNKP-211ENST00000598020 IFNAR1P17181 557 aa23.51■■□□□ 1.35
PNKP-211ENST00000598020 CCT2P78371 535 aaKnown RBP23.51■■□□□ 1.35
PNKP-211ENST00000598020 ZNF467Q7Z7K2 595 aaPredicted RBP23.51■■□□□ 1.35
PNKP-211ENST00000598020 MSL3Q8N5Y2 521 aaKnown RBP23.51■■□□□ 1.35
PNKP-211ENST00000598020 MAML3Q96JK9 1138 aa23.51■■□□□ 1.35
PNKP-211ENST00000598020 RBM27Q9P2N5 1060 aaKnown RBP23.51■■□□□ 1.35
PNKP-211ENST00000598020 CCL14Q16627 93 aa23.5■■□□□ 1.35
PNKP-211ENST00000598020 NSMFQ6X4W1 530 aa23.5■■□□□ 1.35
PNKP-211ENST00000598020 RNF207Q6ZRF8 634 aa23.5■■□□□ 1.35
PNKP-211ENST00000598020 SH3TC2Q8TF17 1288 aa23.5■■□□□ 1.35
PNKP-211ENST00000598020 PIBF1Q8WXW3 757 aa23.5■■□□□ 1.35
PNKP-211ENST00000598020 ABHD8Q96I13 439 aa23.5■■□□□ 1.35
PNKP-211ENST00000598020 ZNF333Q96JL9 665 aa23.5■■□□□ 1.35
PNKP-211ENST00000598020 SLKQ9H2G2 1235 aaPredicted RBP23.5■■□□□ 1.35
PNKP-211ENST00000598020 NCOA5Q9HCD5 579 aaKnown RBP23.5■■□□□ 1.35
PNKP-211ENST00000598020 MAP3K20Q9NYL2 800 aaKnown RBP23.5■■□□□ 1.35
PNKP-211ENST00000598020 FLRT1Q9NZU1 646 aa23.5■■□□□ 1.35
PNKP-211ENST00000598020 V9GY48 417 aaPredicted RBP23.5■■□□□ 1.35
PNKP-211ENST00000598020 POTEB2H3BUK9 544 aa23.49■■□□□ 1.35
PNKP-211ENST00000598020 OPLAHO14841 1288 aa23.49■■□□□ 1.35
PNKP-211ENST00000598020 PRPF3O43395 683 aaKnown RBP23.49■■□□□ 1.35
PNKP-211ENST00000598020 BAATQ14032 418 aaPredicted RBP23.49■■□□□ 1.35
PNKP-211ENST00000598020 HTTP42858 3142 aa23.49■■□□□ 1.35
PNKP-211ENST00000598020 hCG_1984214I3L0E3 225 aa23.48■■□□□ 1.35
PNKP-211ENST00000598020 INHAP05111 366 aa23.48■■□□□ 1.35
PNKP-211ENST00000598020 RPS6P62753 249 aaKnown RBP23.48■■□□□ 1.35
PNKP-211ENST00000598020 UBXN2AP68543 259 aa23.48■■□□□ 1.35
PNKP-211ENST00000598020 SCRN1Q12765 414 aa23.48■■□□□ 1.35
PNKP-211ENST00000598020 ME3Q16798 604 aa23.48■■□□□ 1.35
PNKP-211ENST00000598020 MAP3K21Q5TCX8 1036 aa23.48■■□□□ 1.35
PNKP-211ENST00000598020 MAMDC4Q6UXC1 1216 aa23.48■■□□□ 1.35
PNKP-211ENST00000598020 ZNF713Q8N859 430 aaPredicted RBP23.48■■□□□ 1.35
PNKP-211ENST00000598020 FGD4Q96M96 766 aa23.48■■□□□ 1.35
PNKP-211ENST00000598020 RNF26Q9BY78 433 aaPredicted RBP23.48■■□□□ 1.35
PNKP-211ENST00000598020 LIMCH1Q9UPQ0 1083 aa23.48■■□□□ 1.35
PNKP-211ENST00000598020 RBBP6Q7Z6E9 1792 aaKnown RBP23.47■■□□□ 1.35
PNKP-211ENST00000598020 LCTP09848 1927 aa23.47■■□□□ 1.35
PNKP-211ENST00000598020 LOC102724159A0A0B4J2E5 919 aa23.47■■□□□ 1.35
PNKP-211ENST00000598020 hCG_1642624A0A1W2PR95 340 aa23.47■■□□□ 1.35
PNKP-211ENST00000598020 PTPDC1A2A3K4 754 aa23.47■■□□□ 1.35
PNKP-211ENST00000598020 HSD17B4P51659 736 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms