RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 GOLGA8AA7E2F4 631 aa14.02□□□□□ -0.17
SHKBP1-213ENST00000597325 EEF2P13639 858 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-213ENST00000597325 METAP2P50579 478 aaKnown RBP eCLIP14.02□□□□□ -0.17
SHKBP1-213ENST00000597325 RCAN1P53805 252 aa14.02□□□□□ -0.17
SHKBP1-213ENST00000597325 TFF2Q03403 129 aa14.02□□□□□ -0.17
SHKBP1-213ENST00000597325 STK3Q13188 491 aa14.02□□□□□ -0.17
SHKBP1-213ENST00000597325 C1orf53Q5VUE5 145 aa14.02□□□□□ -0.17
SHKBP1-213ENST00000597325 RCSD1Q6JBY9 416 aa14.02□□□□□ -0.17
SHKBP1-213ENST00000597325 LRRC47Q8N1G4 583 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-213ENST00000597325 PNMA1Q8ND90 353 aa14.02□□□□□ -0.17
SHKBP1-213ENST00000597325 NUP133Q8WUM0 1156 aa14.02□□□□□ -0.17
SHKBP1-213ENST00000597325 TMX3Q96JJ7 454 aa14.02□□□□□ -0.17
SHKBP1-213ENST00000597325 FEZ1Q99689 392 aa14.02□□□□□ -0.17
SHKBP1-213ENST00000597325 APBA2Q99767 749 aa14.02□□□□□ -0.17
SHKBP1-213ENST00000597325 TMEM47Q9BQJ4 181 aa14.02□□□□□ -0.17
SHKBP1-213ENST00000597325 AS3MTQ9HBK9 375 aa14.02□□□□□ -0.17
SHKBP1-213ENST00000597325 SENP2Q9HC62 589 aa14.02□□□□□ -0.17
SHKBP1-213ENST00000597325 BRPF3Q9ULD4 1205 aa14.02□□□□□ -0.17
SHKBP1-213ENST00000597325 PLXNA1Q9UIW2 1896 aa14.01□□□□□ -0.17
SHKBP1-213ENST00000597325 USP17L5A8MUK1 530 aa14.01□□□□□ -0.17
SHKBP1-213ENST00000597325 MSCO60682 206 aa14.01□□□□□ -0.17
SHKBP1-213ENST00000597325 GUCY1A2P33402 732 aa14.01□□□□□ -0.17
SHKBP1-213ENST00000597325 RGS2P41220 211 aa14.01□□□□□ -0.17
SHKBP1-213ENST00000597325 NOVP48745 357 aa14.01□□□□□ -0.17
SHKBP1-213ENST00000597325 KCNQ1P51787 676 aa14.01□□□□□ -0.17
SHKBP1-213ENST00000597325 EVCP57679 992 aa14.01□□□□□ -0.17
SHKBP1-213ENST00000597325 JAG1P78504 1218 aa14.01□□□□□ -0.17
SHKBP1-213ENST00000597325 PABPC4Q13310 644 aaKnown RBP eCLIP14.01□□□□□ -0.17
SHKBP1-213ENST00000597325 ME3Q16798 604 aa14.01□□□□□ -0.17
SHKBP1-213ENST00000597325 MYL10Q9BUA6 226 aa14.01□□□□□ -0.17
SHKBP1-213ENST00000597325 PBX4Q9BYU1 374 aa14.01□□□□□ -0.17
SHKBP1-213ENST00000597325 FLRT1Q9NZU1 646 aa14.01□□□□□ -0.17
SHKBP1-213ENST00000597325 SYNPO2Q9UMS6 1093 aa14.01□□□□□ -0.17
SHKBP1-213ENST00000597325 MYH4Q9Y623 1939 aa14.01□□□□□ -0.17
SHKBP1-213ENST00000597325 CCDC196A0A1B0GTZ2 297 aa14□□□□□ -0.17
SHKBP1-213ENST00000597325 FAM86C2PA6NEL3 165 aa14□□□□□ -0.17
SHKBP1-213ENST00000597325 RAD21O60216 631 aa14□□□□□ -0.17
SHKBP1-213ENST00000597325 DHX16O60231 1041 aaKnown RBP14□□□□□ -0.17
SHKBP1-213ENST00000597325 PFKFB2O60825 505 aa14□□□□□ -0.17
SHKBP1-213ENST00000597325 LARGE1O95461 756 aa14□□□□□ -0.17
SHKBP1-213ENST00000597325 PDIA3P30101 505 aaKnown RBP14□□□□□ -0.17
SHKBP1-213ENST00000597325 MAPK4P31152 587 aa14□□□□□ -0.17
SHKBP1-213ENST00000597325 KIF5BP33176 963 aa14□□□□□ -0.17
SHKBP1-213ENST00000597325 PBX2P40425 430 aa14□□□□□ -0.17
SHKBP1-213ENST00000597325 RTN1Q16799 776 aa14□□□□□ -0.17
SHKBP1-213ENST00000597325 GJC2Q5T442 439 aaPredicted RBP14□□□□□ -0.17
SHKBP1-213ENST00000597325 GPR142Q7Z601 462 aa14□□□□□ -0.17
SHKBP1-213ENST00000597325 RAB11FIP4Q86YS3 637 aa14□□□□□ -0.17
SHKBP1-213ENST00000597325 CTCFLQ8NI51 663 aaPredicted RBP14□□□□□ -0.17
SHKBP1-213ENST00000597325 PORCNQ9H237 461 aa14□□□□□ -0.17
SHKBP1-213ENST00000597325 GOPCQ9HD26 462 aa14□□□□□ -0.17
SHKBP1-213ENST00000597325 MTMR7Q9Y216 660 aa14□□□□□ -0.17
SHKBP1-213ENST00000597325 NID2Q14112 1375 aa13.99□□□□□ -0.17
SHKBP1-213ENST00000597325 CPLX1O14810 134 aa13.99□□□□□ -0.17
SHKBP1-213ENST00000597325 IGHA2P01877 340 aa13.99□□□□□ -0.17
SHKBP1-213ENST00000597325 RXRAP19793 462 aa13.99□□□□□ -0.17
SHKBP1-213ENST00000597325 HMGCS2P54868 508 aa13.99□□□□□ -0.17
SHKBP1-213ENST00000597325 SPP2Q13103 211 aa13.99□□□□□ -0.17
SHKBP1-213ENST00000597325 Q3C1V9 767 aa13.99□□□□□ -0.17
SHKBP1-213ENST00000597325 SH3D19Q5HYK7 790 aa13.99□□□□□ -0.17
SHKBP1-213ENST00000597325 CPLX2Q6PUV4 134 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-213ENST00000597325 CCDC83Q8IWF9 413 aa13.99□□□□□ -0.17
SHKBP1-213ENST00000597325 CCDC144CPQ8IYA2 1237 aa13.99□□□□□ -0.17
SHKBP1-213ENST00000597325 NECAB1Q8N987 351 aa13.99□□□□□ -0.17
SHKBP1-213ENST00000597325 GPRC5AQ8NFJ5 357 aa13.99□□□□□ -0.17
SHKBP1-213ENST00000597325 GTF3C6Q969F1 213 aa13.99□□□□□ -0.17
SHKBP1-213ENST00000597325 IPO9Q96P70 1041 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-213ENST00000597325 RBM28Q9NW13 759 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-213ENST00000597325 ISY1Q9ULR0 285 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-213ENST00000597325 DCHS1Q96JQ0 3298 aa13.99□□□□□ -0.17
SHKBP1-213ENST00000597325 MYO15AQ9UKN7 3530 aa13.98□□□□□ -0.17
SHKBP1-213ENST00000597325 CDKL5O76039 1030 aa13.98□□□□□ -0.17
SHKBP1-213ENST00000597325 CCT2P78371 535 aaKnown RBP13.98□□□□□ -0.17
SHKBP1-213ENST00000597325 NHLH1Q02575 133 aa13.98□□□□□ -0.17
SHKBP1-213ENST00000597325 PPP2R5BQ15173 497 aa13.98□□□□□ -0.17
SHKBP1-213ENST00000597325 CCDC96Q2M329 555 aa13.98□□□□□ -0.17
SHKBP1-213ENST00000597325 FANCBQ8NB91 859 aa13.98□□□□□ -0.17
SHKBP1-213ENST00000597325 ZNF280CQ8ND82 737 aa13.98□□□□□ -0.17
SHKBP1-213ENST00000597325 GMCL1P1Q8NEA9 526 aa13.98□□□□□ -0.17
SHKBP1-213ENST00000597325 TRPV1Q8NER1 839 aa13.98□□□□□ -0.17
SHKBP1-213ENST00000597325 MKL1Q969V6 931 aa13.98□□□□□ -0.17
SHKBP1-213ENST00000597325 MAP3K14Q99558 947 aa13.98□□□□□ -0.17
SHKBP1-213ENST00000597325 RBPJLQ9UBG7 517 aa13.98□□□□□ -0.17
SHKBP1-213ENST00000597325 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-213ENST00000597325 KIAA0355O15063 1070 aa13.97□□□□□ -0.17
SHKBP1-213ENST00000597325 PARP1P09874 1014 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-213ENST00000597325 IGFBP4P22692 258 aa13.97□□□□□ -0.17
SHKBP1-213ENST00000597325 HOXA7P31268 230 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-213ENST00000597325 GNAQP50148 359 aa13.97□□□□□ -0.17
SHKBP1-213ENST00000597325 USP14P54578 494 aa13.97□□□□□ -0.17
SHKBP1-213ENST00000597325 TLE2Q04725 743 aa13.97□□□□□ -0.17
SHKBP1-213ENST00000597325 FPGSQ05932 587 aa13.97□□□□□ -0.17
SHKBP1-213ENST00000597325 SCRN1Q12765 414 aa13.97□□□□□ -0.17
SHKBP1-213ENST00000597325 TROAPQ12815 778 aa13.97□□□□□ -0.17
SHKBP1-213ENST00000597325 GRM4Q14833 912 aa13.97□□□□□ -0.17
SHKBP1-213ENST00000597325 ZYXQ15942 572 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-213ENST00000597325 AAK1Q2M2I8 961 aa13.97□□□□□ -0.17
SHKBP1-213ENST00000597325 ASPRV1Q53RT3 343 aa13.97□□□□□ -0.17
SHKBP1-213ENST00000597325 RASIP1Q5U651 963 aa13.97□□□□□ -0.17
SHKBP1-213ENST00000597325 SLFN13Q68D06 897 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms