RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 RANBP17Q9H2T7 1088 aaKnown RBP13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 ZSCAN16Q9H4T2 348 aaPredicted RBP13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 CPA4Q9UI42 421 aa13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 PTCH2Q9Y6C5 1203 aa13.19□□□□□ -0.3
SH2D3A-206ENST00000597254 BTBD18B2RXH4 712 aa13.18□□□□□ -0.3
SH2D3A-206ENST00000597254 FLOT1O75955 427 aa13.18□□□□□ -0.3
SH2D3A-206ENST00000597254 GNRH1P01148 92 aa13.18□□□□□ -0.3
SH2D3A-206ENST00000597254 NAPAP54920 295 aa13.18□□□□□ -0.3
SH2D3A-206ENST00000597254 COG2Q14746 738 aa13.18□□□□□ -0.3
SH2D3A-206ENST00000597254 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
SH2D3A-206ENST00000597254 C17orf99Q6UX52 265 aa13.18□□□□□ -0.3
SH2D3A-206ENST00000597254 GADL1Q6ZQY3 521 aa13.18□□□□□ -0.3
SH2D3A-206ENST00000597254 FBXO11Q86XK2 927 aa13.18□□□□□ -0.3
SH2D3A-206ENST00000597254 CCDC12Q8WUD4 166 aaPredicted RBP13.18□□□□□ -0.3
SH2D3A-206ENST00000597254 TMEM106CQ9BVX2 250 aa13.18□□□□□ -0.3
SH2D3A-206ENST00000597254 AMNQ9BXJ7 453 aa13.18□□□□□ -0.3
SH2D3A-206ENST00000597254 PPP1R9AQ9ULJ8 1098 aa13.18□□□□□ -0.3
SH2D3A-206ENST00000597254 PTPRFP10586 1907 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 SMCO2A6NFE2 343 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 KIF28PB7ZC32 967 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 ZBED4O75132 1171 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 ECM2O94769 699 aaPredicted RBP13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 FDX1P10109 184 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 CALML3P27482 149 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 HOXA7P31268 230 aaPredicted RBP13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 DSG3P32926 999 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 KRT2P35908 639 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 PRMT2P55345 433 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 MOGSQ13724 837 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 NPY5RQ15761 445 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 TREML2Q5T2D2 321 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 GALNT17Q6IS24 598 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 CLEC17AQ6ZS10 378 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 DIS3L2Q8IYB7 885 aaKnown RBP13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 CCDC148Q8NFR7 591 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 OXER1Q8TDS5 423 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 ARHGAP39Q9C0H5 1083 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 ZMYND12Q9H0C1 365 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 FOXP1Q9H334 677 aaPredicted RBP13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 HOXC10Q9NYD6 342 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 PCDHA4Q9UN74 947 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 ADAMTS5Q9UNA0 930 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 ATP6V1DQ9Y5K8 247 aa13.17□□□□□ -0.3
SH2D3A-206ENST00000597254 ESYT2A0FGR8 921 aa13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 POTEFA5A3E0 1075 aa13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 ADAMTS3O15072 1205 aa13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 BAG4O95429 457 aaKnown RBP13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 U2AF2P26368 475 aaKnown RBP eCLIP13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 HOXD10P28358 340 aa13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 PSMC4P43686 418 aa13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 TRAF1Q13077 416 aa13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 GNL2Q13823 731 aaKnown RBP13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 FOXD4L6Q3SYB3 417 aaPredicted RBP13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 GPAT2Q6NUI2 795 aa13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 FAM173BQ6P4H8 233 aa13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 CCDC174Q6PII3 467 aa13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 FOXD4L3Q6VB84 417 aaPredicted RBP13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 BLIDQ8IZY5 108 aa13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 ATG4CQ96DT6 458 aa13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 ZNF333Q96JL9 665 aa13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 SLC38A10Q9HBR0 1119 aa13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 BRMS1Q9HCU9 246 aa13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 C6orf50Q9HD87 102 aa13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 AGTPBP1Q9UPW5 1226 aa13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 PCDHA1Q9Y5I3 950 aa13.16□□□□□ -0.3
SH2D3A-206ENST00000597254 ZNF536O15090 1300 aa13.15□□□□□ -0.3
SH2D3A-206ENST00000597254 MYPNQ86TC9 1320 aa13.15□□□□□ -0.3
SH2D3A-206ENST00000597254 TNRC18O15417 2968 aaPredicted RBP13.15□□□□□ -0.3
SH2D3A-206ENST00000597254 CYP2C8P10632 490 aa13.15□□□□□ -0.3
SH2D3A-206ENST00000597254 GNA11P29992 359 aa13.15□□□□□ -0.3
SH2D3A-206ENST00000597254 NR5A1Q13285 461 aa13.15□□□□□ -0.3
SH2D3A-206ENST00000597254 PRPF38BQ5VTL8 546 aaKnown RBP13.15□□□□□ -0.3
SH2D3A-206ENST00000597254 PPP1R18Q6NYC8 613 aa13.15□□□□□ -0.3
SH2D3A-206ENST00000597254 BRAPQ7Z569 592 aa13.15□□□□□ -0.3
SH2D3A-206ENST00000597254 DAGLBQ8NCG7 672 aa13.15□□□□□ -0.3
SH2D3A-206ENST00000597254 CHAMP1Q96JM3 812 aa13.15□□□□□ -0.3
SH2D3A-206ENST00000597254 SLC45A1Q9Y2W3 748 aa13.15□□□□□ -0.3
SH2D3A-206ENST00000597254 CTDP1Q9Y5B0 961 aaPredicted RBP13.15□□□□□ -0.3
SH2D3A-206ENST00000597254 RLFQ13129 1914 aa13.15□□□□□ -0.3
SH2D3A-206ENST00000597254 ADGRA2Q96PE1 1338 aa13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 M0R2N6 131 aa13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 VWA5AO00534 786 aa13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 ICAM1P05362 532 aa13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 OSBPP22059 807 aa13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 DNM1Q05193 864 aaKnown RBP13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 PABPC4Q13310 644 aaKnown RBP eCLIP13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 USH1GQ495M9 461 aa13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 CPXCR1Q8N123 301 aa13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 REPS2Q8NFH8 660 aa13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 RAET1EQ8TD07 263 aa13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 SMCR8Q8TEV9 937 aaPredicted RBP13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 TNFRSF25Q93038 417 aa13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 TRIM47Q96LD4 638 aa13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 AGBL1Q96MI9 1066 aa13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 GBP4Q96PP9 640 aa13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 P2RX7Q99572 595 aaKnown RBP13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 RAVER2Q9HCJ3 691 aaKnown RBP13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 RIC8AQ9NPQ8 531 aa13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 SRRDQ9UH36 339 aa13.14□□□□□ -0.31
SH2D3A-206ENST00000597254 PCDHA6Q9UN73 950 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms