RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 CAPN15O75808 1086 aa10.08□□□□□ -0.8
SNRPA-202ENST00000596860 ZSCAN22P10073 491 aaPredicted RBP10.08□□□□□ -0.8
SNRPA-202ENST00000596860 TRAPPC10P48553 1259 aa10.08□□□□□ -0.8
SNRPA-202ENST00000596860 VEGFBP49765 207 aa10.08□□□□□ -0.8
SNRPA-202ENST00000596860 NAPAP54920 295 aa10.08□□□□□ -0.8
SNRPA-202ENST00000596860 AP3B2Q13367 1082 aa10.08□□□□□ -0.8
SNRPA-202ENST00000596860 CLEC17AQ6ZS10 378 aa10.08□□□□□ -0.8
SNRPA-202ENST00000596860 HEATR3Q7Z4Q2 680 aa10.08□□□□□ -0.8
SNRPA-202ENST00000596860 HOMER1Q86YM7 354 aa10.08□□□□□ -0.8
SNRPA-202ENST00000596860 MCF2L2Q86YR7 1114 aa10.08□□□□□ -0.8
SNRPA-202ENST00000596860 RIOX2Q8IUF8 465 aa10.08□□□□□ -0.8
SNRPA-202ENST00000596860 CHST13Q8NET6 341 aa10.08□□□□□ -0.8
SNRPA-202ENST00000596860 CUL5Q93034 780 aa10.08□□□□□ -0.8
SNRPA-202ENST00000596860 ATG4CQ96DT6 458 aa10.08□□□□□ -0.8
SNRPA-202ENST00000596860 P2RX7Q99572 595 aaKnown RBP10.08□□□□□ -0.8
SNRPA-202ENST00000596860 CPVLQ9H3G5 476 aa10.08□□□□□ -0.8
SNRPA-202ENST00000596860 VAT1LQ9HCJ6 419 aa10.08□□□□□ -0.8
SNRPA-202ENST00000596860 MORF4L1Q9UBU8 362 aa10.08□□□□□ -0.8
SNRPA-202ENST00000596860 LOC102724159A0A0B4J2E5 919 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 SMCO2A6NFE2 343 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 M0R2N6 131 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 PDHXO00330 501 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 PPP1R11O60927 126 aaPredicted RBP10.07□□□□□ -0.8
SNRPA-202ENST00000596860 F13A1P00488 732 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 FOSP01100 380 aaPredicted RBP10.07□□□□□ -0.8
SNRPA-202ENST00000596860 KRT2P35908 639 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 STAT3P40763 770 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 ADCY7P51828 1080 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 NLRP5P59047 1200 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 CCNA1P78396 465 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 ORC2Q13416 577 aaPredicted RBP10.07□□□□□ -0.8
SNRPA-202ENST00000596860 DGKZQ13574 1117 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 TMEM132BQ14DG7 1078 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 PWP2Q15269 919 aaKnown RBP10.07□□□□□ -0.8
SNRPA-202ENST00000596860 NPY5RQ15761 445 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 FAM110CQ1W6H9 321 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 IFNL1Q8IU54 200 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 BLIDQ8IZY5 108 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 FOXD4L1Q9NU39 408 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 VPS54Q9P1Q0 977 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 CCPG1Q9ULG6 757 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 MORC2Q9Y6X9 1032 aaPredicted RBP10.07□□□□□ -0.8
SNRPA-202ENST00000596860 ADGRA2Q96PE1 1338 aa10.07□□□□□ -0.8
SNRPA-202ENST00000596860 ZNF236Q9UL36 1845 aa10.06□□□□□ -0.8
SNRPA-202ENST00000596860 CLK2P49760 499 aaKnown RBP10.06□□□□□ -0.8
SNRPA-202ENST00000596860 KIF23Q02241 960 aaPredicted RBP10.06□□□□□ -0.8
SNRPA-202ENST00000596860 NOM1Q5C9Z4 860 aaKnown RBP10.06□□□□□ -0.8
SNRPA-202ENST00000596860 TYW1BQ6NUM6 668 aa10.06□□□□□ -0.8
SNRPA-202ENST00000596860 KRT25Q7Z3Z0 450 aa10.06□□□□□ -0.8
SNRPA-202ENST00000596860 DIS3L2Q8IYB7 885 aaKnown RBP10.06□□□□□ -0.8
SNRPA-202ENST00000596860 REXO1Q8N1G1 1221 aaKnown RBP10.06□□□□□ -0.8
SNRPA-202ENST00000596860 FAM43AQ8N2R8 423 aa10.06□□□□□ -0.8
SNRPA-202ENST00000596860 SPRYD3Q8NCJ5 442 aa10.06□□□□□ -0.8
SNRPA-202ENST00000596860 GPKOWQ92917 476 aaPredicted RBP eCLIP10.06□□□□□ -0.8
SNRPA-202ENST00000596860 TNFRSF25Q93038 417 aa10.06□□□□□ -0.8
SNRPA-202ENST00000596860 CAPNS2Q96L46 248 aa10.06□□□□□ -0.8
SNRPA-202ENST00000596860 AIFM3Q96NN9 605 aa10.06□□□□□ -0.8
SNRPA-202ENST00000596860 NAP1L4Q99733 375 aaKnown RBP10.06□□□□□ -0.8
SNRPA-202ENST00000596860 PTPN18Q99952 460 aa10.06□□□□□ -0.8
SNRPA-202ENST00000596860 SPATC1LQ9H0A9 340 aa10.06□□□□□ -0.8
SNRPA-202ENST00000596860 MROH8Q9H579 483 aa10.06□□□□□ -0.8
SNRPA-202ENST00000596860 PSTPIP2Q9H939 334 aa10.06□□□□□ -0.8
SNRPA-202ENST00000596860 ZFYVE28Q9HCC9 887 aa10.06□□□□□ -0.8
SNRPA-202ENST00000596860 RNF216Q9NWF9 866 aaPredicted RBP10.06□□□□□ -0.8
SNRPA-202ENST00000596860 TCHHQ07283 1943 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 ZNFX1Q9P2E3 1918 aaKnown RBP10.05□□□□□ -0.8
SNRPA-202ENST00000596860 hCG_1642624A0A1W2PR95 340 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 VPS37CA5D8V6 355 aaPredicted RBP10.05□□□□□ -0.8
SNRPA-202ENST00000596860 IGF2BP3O00425 579 aaKnown RBP eCLIP10.05□□□□□ -0.8
SNRPA-202ENST00000596860 CA12O43570 354 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 HOXD11P31277 338 aaPredicted RBP10.05□□□□□ -0.8
SNRPA-202ENST00000596860 HSD17B4P51659 736 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 ERVK-9P63128 1117 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 ERVK-24P63145 666 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 RESTQ13127 1097 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 RILPL1Q5EBL4 403 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 SNRNP48Q6IEG0 339 aaKnown RBP10.05□□□□□ -0.8
SNRPA-202ENST00000596860 NOSTRINQ8IVI9 506 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 ABRAQ8N0Z2 381 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 GPRC5AQ8NFJ5 357 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 SMCR8Q8TEV9 937 aaPredicted RBP10.05□□□□□ -0.8
SNRPA-202ENST00000596860 CLEC4DQ8WXI8 215 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 COA7Q96BR5 231 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 SHISA4Q96DD7 197 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 ACAD9Q9H845 621 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 EHMT1Q9H9B1 1298 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 RBPJLQ9UBG7 517 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 ZDHHC9Q9Y397 364 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 PFASO15067 1338 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 FRMPD4Q14CM0 1322 aa10.05□□□□□ -0.8
SNRPA-202ENST00000596860 MYH7BA7E2Y1 1941 aa10.04□□□□□ -0.8
SNRPA-202ENST00000596860 GCOM1H8Y6P7 765 aaPredicted RBP10.04□□□□□ -0.8
SNRPA-202ENST00000596860 MEIS2O14770 477 aa10.04□□□□□ -0.8
SNRPA-202ENST00000596860 OPLAHO14841 1288 aa10.04□□□□□ -0.8
SNRPA-202ENST00000596860 STRNO43815 780 aa10.04□□□□□ -0.8
SNRPA-202ENST00000596860 TLR2O60603 784 aa10.04□□□□□ -0.8
SNRPA-202ENST00000596860 CNMDO75829 334 aa10.04□□□□□ -0.8
SNRPA-202ENST00000596860 BMP15O95972 392 aa10.04□□□□□ -0.8
SNRPA-202ENST00000596860 POLR2MP0CAP2 368 aa10.04□□□□□ -0.8
SNRPA-202ENST00000596860 BCRP11274 1271 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms