RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 HOMER1Q86YM7 354 aa17.42■□□□□ 0.38
IRF3-211ENST00000596644 CCDC144CPQ8IYA2 1237 aa17.42■□□□□ 0.38
IRF3-211ENST00000596644 NAP1L2Q9ULW6 460 aaPredicted RBP17.42■□□□□ 0.38
IRF3-211ENST00000596644 ABCB11O95342 1321 aa17.42■□□□□ 0.38
IRF3-211ENST00000596644 DNAJC25-GNG10A0A024R161 153 aa17.41■□□□□ 0.38
IRF3-211ENST00000596644 POTEB2H3BUK9 544 aa17.41■□□□□ 0.38
IRF3-211ENST00000596644 NFIBO00712 420 aa17.41■□□□□ 0.38
IRF3-211ENST00000596644 ZBTB5O15062 677 aa17.41■□□□□ 0.38
IRF3-211ENST00000596644 GNAQP50148 359 aa17.41■□□□□ 0.38
IRF3-211ENST00000596644 APOA5Q6Q788 366 aa17.41■□□□□ 0.38
IRF3-211ENST00000596644 DEFB118Q96PH6 123 aa17.41■□□□□ 0.38
IRF3-211ENST00000596644 LZTS2Q9BRK4 669 aa17.41■□□□□ 0.38
IRF3-211ENST00000596644 RIOX1Q9H6W3 641 aa17.41■□□□□ 0.38
IRF3-211ENST00000596644 PAK6Q9NQU5 681 aaPredicted RBP17.41■□□□□ 0.38
IRF3-211ENST00000596644 KLF18A0A0U1RQI7 1052 aa17.4■□□□□ 0.38
IRF3-211ENST00000596644 PTPDC1A2A3K4 754 aa17.4■□□□□ 0.38
IRF3-211ENST00000596644 ZBTB43O43298 467 aa17.4■□□□□ 0.38
IRF3-211ENST00000596644 EN2P19622 333 aaPredicted RBP17.4■□□□□ 0.38
IRF3-211ENST00000596644 CNGA1P29973 690 aa17.4■□□□□ 0.38
IRF3-211ENST00000596644 CCND3P30281 292 aaPredicted RBP17.4■□□□□ 0.38
IRF3-211ENST00000596644 RUFY3Q7L099 469 aa17.4■□□□□ 0.38
IRF3-211ENST00000596644 FANCBQ8NB91 859 aa17.4■□□□□ 0.38
IRF3-211ENST00000596644 U2AF1L4Q8WU68 220 aaKnown RBP17.4■□□□□ 0.38
IRF3-211ENST00000596644 PIGSQ96S52 555 aa17.4■□□□□ 0.38
IRF3-211ENST00000596644 TINF2Q9BSI4 451 aa17.4■□□□□ 0.38
IRF3-211ENST00000596644 AMNQ9BXJ7 453 aa17.4■□□□□ 0.38
IRF3-211ENST00000596644 CYP39A1Q9NYL5 469 aa17.4■□□□□ 0.38
IRF3-211ENST00000596644 GTF3C3Q9Y5Q9 886 aa17.4■□□□□ 0.38
IRF3-211ENST00000596644 CYP46A1Q9Y6A2 500 aa17.4■□□□□ 0.38
IRF3-211ENST00000596644 BAZ2BQ9UIF8 2168 aaKnown RBP17.39■□□□□ 0.37
IRF3-211ENST00000596644 CENPFP49454 3210 aa17.39■□□□□ 0.37
IRF3-211ENST00000596644 PLEKHA8P1O95397 391 aa17.39■□□□□ 0.37
IRF3-211ENST00000596644 GJA8P48165 433 aa17.39■□□□□ 0.37
IRF3-211ENST00000596644 CNTN2Q02246 1040 aa17.39■□□□□ 0.37
IRF3-211ENST00000596644 TRAF1Q13077 416 aa17.39■□□□□ 0.37
IRF3-211ENST00000596644 RNF207Q6ZRF8 634 aa17.39■□□□□ 0.37
IRF3-211ENST00000596644 ZNF467Q7Z7K2 595 aaPredicted RBP17.39■□□□□ 0.37
IRF3-211ENST00000596644 MSL3Q8N5Y2 521 aaKnown RBP17.39■□□□□ 0.37
IRF3-211ENST00000596644 CLEC4DQ8WXI8 215 aa17.39■□□□□ 0.37
IRF3-211ENST00000596644 PIBF1Q8WXW3 757 aa17.39■□□□□ 0.37
IRF3-211ENST00000596644 BRF1Q92994 677 aa17.39■□□□□ 0.37
IRF3-211ENST00000596644 MTMR8Q96EF0 704 aa17.39■□□□□ 0.37
IRF3-211ENST00000596644 SPZ1Q9BXG8 430 aa17.39■□□□□ 0.37
IRF3-211ENST00000596644 TM6SF1Q9BZW5 370 aa17.39■□□□□ 0.37
IRF3-211ENST00000596644 ZSWIM6Q9HCJ5 1215 aa17.39■□□□□ 0.37
IRF3-211ENST00000596644 BRPF3Q9ULD4 1205 aa17.39■□□□□ 0.37
IRF3-211ENST00000596644 MRPL11Q9Y3B7 192 aaKnown RBP17.39■□□□□ 0.37
IRF3-211ENST00000596644 GOLGA8AA7E2F4 631 aa17.38■□□□□ 0.37
IRF3-211ENST00000596644 GOLGA8BA8MQT2 603 aa17.38■□□□□ 0.37
IRF3-211ENST00000596644 CYTH3O43739 400 aa17.38■□□□□ 0.37
IRF3-211ENST00000596644 SGPL1O95470 568 aa17.38■□□□□ 0.37
IRF3-211ENST00000596644 IGHA2P01877 340 aa17.38■□□□□ 0.37
IRF3-211ENST00000596644 TFRCP02786 760 aaKnown RBP17.38■□□□□ 0.37
IRF3-211ENST00000596644 CYBAP13498 195 aa17.38■□□□□ 0.37
IRF3-211ENST00000596644 CALML3P27482 149 aa17.38■□□□□ 0.37
IRF3-211ENST00000596644 SMARCA1P28370 1054 aa17.38■□□□□ 0.37
IRF3-211ENST00000596644 APOBRQ0VD83 1088 aa17.38■□□□□ 0.37
IRF3-211ENST00000596644 BAATQ14032 418 aaPredicted RBP17.38■□□□□ 0.37
IRF3-211ENST00000596644 RTN1Q16799 776 aa17.38■□□□□ 0.37
IRF3-211ENST00000596644 SLC35G1Q2M3R5 365 aa17.38■□□□□ 0.37
IRF3-211ENST00000596644 FAM133AQ8N9E0 248 aa17.38■□□□□ 0.37
IRF3-211ENST00000596644 RRP36Q96EU6 259 aaKnown RBP17.38■□□□□ 0.37
IRF3-211ENST00000596644 RBM28Q9NW13 759 aaKnown RBP17.38■□□□□ 0.37
IRF3-211ENST00000596644 SEC63Q9UGP8 760 aaKnown RBP17.38■□□□□ 0.37
IRF3-211ENST00000596644 CNPY2Q9Y2B0 182 aa17.38■□□□□ 0.37
IRF3-211ENST00000596644 PCDHA1Q9Y5I3 950 aa17.38■□□□□ 0.37
IRF3-211ENST00000596644 SYNGAP1Q96PV0 1343 aa17.38■□□□□ 0.37
IRF3-211ENST00000596644 LCTP09848 1927 aa17.37■□□□□ 0.37
IRF3-211ENST00000596644 PNMA6FA0A0J9YX94 578 aa17.37■□□□□ 0.37
IRF3-211ENST00000596644 SEC24BO95487 1268 aa17.37■□□□□ 0.37
IRF3-211ENST00000596644 RGS19P49795 217 aa17.37■□□□□ 0.37
IRF3-211ENST00000596644 ANAPC15P60006 121 aa17.37■□□□□ 0.37
IRF3-211ENST00000596644 C8orf34Q49A92 452 aa17.37■□□□□ 0.37
IRF3-211ENST00000596644 PRAMEF19Q5SWL8 479 aa17.37■□□□□ 0.37
IRF3-211ENST00000596644 MAMDC4Q6UXC1 1216 aa17.37■□□□□ 0.37
IRF3-211ENST00000596644 SLC30A10Q6XR72 485 aa17.37■□□□□ 0.37
IRF3-211ENST00000596644 TMTC3Q6ZXV5 915 aa17.37■□□□□ 0.37
IRF3-211ENST00000596644 MCF2L2Q86YR7 1114 aa17.37■□□□□ 0.37
IRF3-211ENST00000596644 CMTR1Q8N1G2 835 aaKnown RBP17.37■□□□□ 0.37
IRF3-211ENST00000596644 SRBD1Q8N5C6 995 aaKnown RBP17.37■□□□□ 0.37
IRF3-211ENST00000596644 TRPV1Q8NER1 839 aa17.37■□□□□ 0.37
IRF3-211ENST00000596644 SHISA4Q96DD7 197 aa17.37■□□□□ 0.37
IRF3-211ENST00000596644 FGD4Q96M96 766 aa17.37■□□□□ 0.37
IRF3-211ENST00000596644 UPF3BQ9BZI7 483 aaKnown RBP17.37■□□□□ 0.37
IRF3-211ENST00000596644 NRBP1Q9UHY1 535 aa17.37■□□□□ 0.37
IRF3-211ENST00000596644 MCM3APO60318 1980 aa17.37■□□□□ 0.37
IRF3-211ENST00000596644 SOWAHBA6NEL2 793 aa17.36■□□□□ 0.37
IRF3-211ENST00000596644 ASB14A6NK59 587 aa17.36■□□□□ 0.37
IRF3-211ENST00000596644 MSCO60682 206 aa17.36■□□□□ 0.37
IRF3-211ENST00000596644 PPP1R11O60927 126 aaPredicted RBP17.36■□□□□ 0.37
IRF3-211ENST00000596644 CAPN2P17655 700 aa17.36■□□□□ 0.37
IRF3-211ENST00000596644 METAP2P50579 478 aaKnown RBP eCLIP17.36■□□□□ 0.37
IRF3-211ENST00000596644 RCAN1P53805 252 aa17.36■□□□□ 0.37
IRF3-211ENST00000596644 RPS6P62753 249 aaKnown RBP17.36■□□□□ 0.37
IRF3-211ENST00000596644 ARMCX2Q7L311 632 aa17.36■□□□□ 0.37
IRF3-211ENST00000596644 FBXL16Q8N461 479 aa17.36■□□□□ 0.37
IRF3-211ENST00000596644 CCDC82Q8N4S0 544 aa17.36■□□□□ 0.37
IRF3-211ENST00000596644 RGS22Q8NE09 1264 aa17.36■□□□□ 0.37
IRF3-211ENST00000596644 ADD3Q9UEY8 706 aaKnown RBP17.36■□□□□ 0.37
IRF3-211ENST00000596644 DDX20Q9UHI6 824 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms