RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 SLC35G1Q2M3R5 365 aa21.22■□□□□ 0.99
ZNF558-204ENST00000596172 QRICH1Q2TAL8 776 aa21.22■□□□□ 0.99
ZNF558-204ENST00000596172 MAMDC4Q6UXC1 1216 aa21.22■□□□□ 0.99
ZNF558-204ENST00000596172 SYNE3Q6ZMZ3 975 aa21.22■□□□□ 0.99
ZNF558-204ENST00000596172 FAM133AQ8N9E0 248 aa21.22■□□□□ 0.99
ZNF558-204ENST00000596172 FANCBQ8NB91 859 aa21.22■□□□□ 0.99
ZNF558-204ENST00000596172 TINF2Q9BSI4 451 aa21.22■□□□□ 0.99
ZNF558-204ENST00000596172 ZSWIM6Q9HCJ5 1215 aa21.22■□□□□ 0.99
ZNF558-204ENST00000596172 CYP39A1Q9NYL5 469 aa21.22■□□□□ 0.99
ZNF558-204ENST00000596172 POTEB2H3BUK9 544 aa21.21■□□□□ 0.99
ZNF558-204ENST00000596172 ZBTB5O15062 677 aa21.21■□□□□ 0.99
ZNF558-204ENST00000596172 CYTH3O43739 400 aa21.21■□□□□ 0.99
ZNF558-204ENST00000596172 EN2P19622 333 aaPredicted RBP21.21■□□□□ 0.99
ZNF558-204ENST00000596172 RCAN1P53805 252 aa21.21■□□□□ 0.99
ZNF558-204ENST00000596172 TRAF1Q13077 416 aa21.21■□□□□ 0.99
ZNF558-204ENST00000596172 APOA5Q6Q788 366 aa21.21■□□□□ 0.99
ZNF558-204ENST00000596172 FBXO11Q86XK2 927 aa21.21■□□□□ 0.99
ZNF558-204ENST00000596172 U2AF1L4Q8WU68 220 aaKnown RBP21.21■□□□□ 0.99
ZNF558-204ENST00000596172 TCEANC2Q96MN5 208 aa21.21■□□□□ 0.99
ZNF558-204ENST00000596172 MYL10Q9BUA6 226 aa21.21■□□□□ 0.99
ZNF558-204ENST00000596172 SPZ1Q9BXG8 430 aa21.21■□□□□ 0.99
ZNF558-204ENST00000596172 AGXT2Q9BYV1 514 aa21.21■□□□□ 0.99
ZNF558-204ENST00000596172 CRISPLD2Q9H0B8 497 aa21.21■□□□□ 0.99
ZNF558-204ENST00000596172 ABCB11O95342 1321 aa21.21■□□□□ 0.99
ZNF558-204ENST00000596172 KIAA0100Q14667 2235 aaKnown RBP21.21■□□□□ 0.99
ZNF558-204ENST00000596172 BRCA2P51587 3418 aa21.2■□□□□ 0.98
ZNF558-204ENST00000596172 CYBAP13498 195 aa21.2■□□□□ 0.98
ZNF558-204ENST00000596172 CPA1P15085 419 aa21.2■□□□□ 0.98
ZNF558-204ENST00000596172 CASTP20810 708 aaKnown RBP21.2■□□□□ 0.98
ZNF558-204ENST00000596172 ANAPC15P60006 121 aa21.2■□□□□ 0.98
ZNF558-204ENST00000596172 RUFY3Q7L099 469 aa21.2■□□□□ 0.98
ZNF558-204ENST00000596172 FGD4Q96M96 766 aa21.2■□□□□ 0.98
ZNF558-204ENST00000596172 DEFB118Q96PH6 123 aa21.2■□□□□ 0.98
ZNF558-204ENST00000596172 AMNQ9BXJ7 453 aa21.2■□□□□ 0.98
ZNF558-204ENST00000596172 BRPF3Q9ULD4 1205 aa21.2■□□□□ 0.98
ZNF558-204ENST00000596172 SYNGAP1Q96PV0 1343 aa21.2■□□□□ 0.98
ZNF558-204ENST00000596172 NFIBO00712 420 aa21.19■□□□□ 0.98
ZNF558-204ENST00000596172 TAL1P17542 331 aaPredicted RBP21.19■□□□□ 0.98
ZNF558-204ENST00000596172 FGD1P98174 961 aa21.19■□□□□ 0.98
ZNF558-204ENST00000596172 NSMFQ6X4W1 530 aa21.19■□□□□ 0.98
ZNF558-204ENST00000596172 Q6ZUG5 572 aa21.19■□□□□ 0.98
ZNF558-204ENST00000596172 IL17RAQ96F46 866 aa21.19■□□□□ 0.98
ZNF558-204ENST00000596172 MRPL11Q9Y3B7 192 aaKnown RBP21.19■□□□□ 0.98
ZNF558-204ENST00000596172 RBBP6Q7Z6E9 1792 aaKnown RBP21.18■□□□□ 0.98
ZNF558-204ENST00000596172 PNMA6FA0A0J9YX94 578 aa21.18■□□□□ 0.98
ZNF558-204ENST00000596172 ZBTB43O43298 467 aa21.18■□□□□ 0.98
ZNF558-204ENST00000596172 MSCO60682 206 aa21.18■□□□□ 0.98
ZNF558-204ENST00000596172 CCND3P30281 292 aaPredicted RBP21.18■□□□□ 0.98
ZNF558-204ENST00000596172 CNTN2Q02246 1040 aa21.18■□□□□ 0.98
ZNF558-204ENST00000596172 BAATQ14032 418 aaPredicted RBP21.18■□□□□ 0.98
ZNF558-204ENST00000596172 PPP2R5BQ15173 497 aa21.18■□□□□ 0.98
ZNF558-204ENST00000596172 USH1GQ495M9 461 aa21.18■□□□□ 0.98
ZNF558-204ENST00000596172 TRPV1Q8NER1 839 aa21.18■□□□□ 0.98
ZNF558-204ENST00000596172 SHISA4Q96DD7 197 aa21.18■□□□□ 0.98
ZNF558-204ENST00000596172 PIGSQ96S52 555 aa21.18■□□□□ 0.98
ZNF558-204ENST00000596172 RBM28Q9NW13 759 aaKnown RBP21.18■□□□□ 0.98
ZNF558-204ENST00000596172 CYP46A1Q9Y6A2 500 aa21.18■□□□□ 0.98
ZNF558-204ENST00000596172 ZNFX1Q9P2E3 1918 aaKnown RBP21.17■□□□□ 0.98
ZNF558-204ENST00000596172 LOC102724159A0A0B4J2E5 919 aa21.17■□□□□ 0.98
ZNF558-204ENST00000596172 SOWAHBA6NEL2 793 aa21.17■□□□□ 0.98
ZNF558-204ENST00000596172 PPP1R11O60927 126 aaPredicted RBP21.17■□□□□ 0.98
ZNF558-204ENST00000596172 EVCP57679 992 aa21.17■□□□□ 0.98
ZNF558-204ENST00000596172 PWP2Q15269 919 aaKnown RBP21.17■□□□□ 0.98
ZNF558-204ENST00000596172 LHX8Q68G74 356 aa21.17■□□□□ 0.98
ZNF558-204ENST00000596172 RNF207Q6ZRF8 634 aa21.17■□□□□ 0.98
ZNF558-204ENST00000596172 MICU3Q86XE3 530 aa21.17■□□□□ 0.98
ZNF558-204ENST00000596172 MCF2L2Q86YR7 1114 aa21.17■□□□□ 0.98
ZNF558-204ENST00000596172 SRBD1Q8N5C6 995 aaKnown RBP21.17■□□□□ 0.98
ZNF558-204ENST00000596172 PCDHA1Q9Y5I3 950 aa21.17■□□□□ 0.98
ZNF558-204ENST00000596172 KLF18A0A0U1RQI7 1052 aa21.16■□□□□ 0.98
ZNF558-204ENST00000596172 ASB14A6NK59 587 aa21.16■□□□□ 0.98
ZNF558-204ENST00000596172 SEPT4O43236 478 aa21.16■□□□□ 0.98
ZNF558-204ENST00000596172 SEC24BO95487 1268 aa21.16■□□□□ 0.98
ZNF558-204ENST00000596172 SNAI1O95863 264 aaPredicted RBP21.16■□□□□ 0.98
ZNF558-204ENST00000596172 TFRCP02786 760 aaKnown RBP21.16■□□□□ 0.98
ZNF558-204ENST00000596172 RXRAP19793 462 aa21.16■□□□□ 0.98
ZNF558-204ENST00000596172 C8orf34Q49A92 452 aa21.16■□□□□ 0.98
ZNF558-204ENST00000596172 TMTC3Q6ZXV5 915 aa21.16■□□□□ 0.98
ZNF558-204ENST00000596172 SAMD3Q8N6K7 520 aa21.16■□□□□ 0.98
ZNF558-204ENST00000596172 BRF1Q92994 677 aa21.16■□□□□ 0.98
ZNF558-204ENST00000596172 RRP36Q96EU6 259 aaKnown RBP21.16■□□□□ 0.98
ZNF558-204ENST00000596172 ADD3Q9UEY8 706 aaKnown RBP21.16■□□□□ 0.98
ZNF558-204ENST00000596172 OGDHLQ9ULD0 1010 aa21.16■□□□□ 0.98
ZNF558-204ENST00000596172 CNPY2Q9Y2B0 182 aa21.16■□□□□ 0.98
ZNF558-204ENST00000596172 PTPDC1A2A3K4 754 aa21.15■□□□□ 0.98
ZNF558-204ENST00000596172 PLEKHA8P1O95397 391 aa21.15■□□□□ 0.98
ZNF558-204ENST00000596172 ZNF865P0CJ78 1059 aaPredicted RBP21.15■□□□□ 0.98
ZNF558-204ENST00000596172 RPS6P62753 249 aaKnown RBP21.15■□□□□ 0.98
ZNF558-204ENST00000596172 GHRHRQ02643 423 aa21.15■□□□□ 0.98
ZNF558-204ENST00000596172 PRAMEF19Q5SWL8 479 aa21.15■□□□□ 0.98
ZNF558-204ENST00000596172 HOMER1Q86YM7 354 aa21.15■□□□□ 0.98
ZNF558-204ENST00000596172 CCDC144CPQ8IYA2 1237 aa21.15■□□□□ 0.98
ZNF558-204ENST00000596172 ANKLE1Q8NAG6 615 aa21.15■□□□□ 0.98
ZNF558-204ENST00000596172 MORC4Q8TE76 937 aa21.15■□□□□ 0.98
ZNF558-204ENST00000596172 MAP3K20Q9NYL2 800 aaKnown RBP21.15■□□□□ 0.98
ZNF558-204ENST00000596172 DDX20Q9UHI6 824 aaKnown RBP21.15■□□□□ 0.98
ZNF558-204ENST00000596172 CNGA1P29973 690 aa21.14■□□□□ 0.97
ZNF558-204ENST00000596172 MLLT1Q03111 559 aaPredicted RBP21.14■□□□□ 0.97
ZNF558-204ENST00000596172 APOBRQ0VD83 1088 aa21.14■□□□□ 0.97
ZNF558-204ENST00000596172 RTN1Q16799 776 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms