RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 SEC23AQ15436 765 aa20.24■□□□□ 0.83
IRF3-208ENST00000594387 TMEM67Q5HYA8 995 aa20.24■□□□□ 0.83
IRF3-208ENST00000594387 RNF207Q6ZRF8 634 aa20.24■□□□□ 0.83
IRF3-208ENST00000594387 CCDC144CPQ8IYA2 1237 aa20.24■□□□□ 0.83
IRF3-208ENST00000594387 ADGRF4Q8IZF3 695 aa20.24■□□□□ 0.83
IRF3-208ENST00000594387 TRAF1Q13077 416 aa20.23■□□□□ 0.83
IRF3-208ENST00000594387 BAATQ14032 418 aaPredicted RBP20.23■□□□□ 0.83
IRF3-208ENST00000594387 CDC37Q16543 378 aaPredicted RBP20.23■□□□□ 0.83
IRF3-208ENST00000594387 USH1GQ495M9 461 aa20.23■□□□□ 0.83
IRF3-208ENST00000594387 CATIPQ7Z7H3 387 aa20.23■□□□□ 0.83
IRF3-208ENST00000594387 SKAP1Q86WV1 359 aa20.23■□□□□ 0.83
IRF3-208ENST00000594387 LSG1Q9H089 658 aaKnown RBP20.23■□□□□ 0.83
IRF3-208ENST00000594387 ABCB11O95342 1321 aa20.23■□□□□ 0.83
IRF3-208ENST00000594387 KLRF2D3W0D1 207 aa20.22■□□□□ 0.83
IRF3-208ENST00000594387 CALML3P27482 149 aa20.22■□□□□ 0.83
IRF3-208ENST00000594387 MCM5P33992 734 aa20.22■□□□□ 0.83
IRF3-208ENST00000594387 LRRC41Q15345 812 aa20.22■□□□□ 0.83
IRF3-208ENST00000594387 NOL8Q76FK4 1167 aaKnown RBP20.22■□□□□ 0.83
IRF3-208ENST00000594387 CHST3Q7LGC8 479 aa20.22■□□□□ 0.83
IRF3-208ENST00000594387 TMTC2Q8N394 836 aa20.22■□□□□ 0.83
IRF3-208ENST00000594387 MTA3Q9BTC8 594 aa20.22■□□□□ 0.83
IRF3-208ENST00000594387 LCTP09848 1927 aa20.21■□□□□ 0.83
IRF3-208ENST00000594387 LOC102724159A0A0B4J2E5 919 aa20.21■□□□□ 0.83
IRF3-208ENST00000594387 SOWAHBA6NEL2 793 aa20.21■□□□□ 0.83
IRF3-208ENST00000594387 DUSP11O75319 330 aaKnown RBP20.21■□□□□ 0.83
IRF3-208ENST00000594387 PWP2Q15269 919 aaKnown RBP20.21■□□□□ 0.83
IRF3-208ENST00000594387 CCDC144BQ3MJ40 725 aa20.21■□□□□ 0.83
IRF3-208ENST00000594387 NFXL1Q6ZNB6 911 aa20.21■□□□□ 0.83
IRF3-208ENST00000594387 FBXO11Q86XK2 927 aa20.21■□□□□ 0.83
IRF3-208ENST00000594387 MCF2L2Q86YR7 1114 aa20.21■□□□□ 0.83
IRF3-208ENST00000594387 MAF1Q9H063 256 aa20.21■□□□□ 0.83
IRF3-208ENST00000594387 CPVLQ9H3G5 476 aa20.21■□□□□ 0.83
IRF3-208ENST00000594387 PRKAG2Q9UGJ0 569 aa20.21■□□□□ 0.83
IRF3-208ENST00000594387 BAZ2BQ9UIF8 2168 aaKnown RBP20.2■□□□□ 0.82
IRF3-208ENST00000594387 NFIBO00712 420 aa20.2■□□□□ 0.82
IRF3-208ENST00000594387 SLC27A2O14975 620 aa20.2■□□□□ 0.82
IRF3-208ENST00000594387 PGK1P00558 417 aa20.2■□□□□ 0.82
IRF3-208ENST00000594387 ATN1P54259 1190 aaPredicted RBP20.2■□□□□ 0.82
IRF3-208ENST00000594387 ERICH6BQ5W0A0 696 aa20.2■□□□□ 0.82
IRF3-208ENST00000594387 CREB3L3Q68CJ9 461 aa20.2■□□□□ 0.82
IRF3-208ENST00000594387 STOX1Q6ZVD7 989 aa20.2■□□□□ 0.82
IRF3-208ENST00000594387 TMEM87BQ96K49 555 aa20.2■□□□□ 0.82
IRF3-208ENST00000594387 MRPL11Q9Y3B7 192 aaKnown RBP20.2■□□□□ 0.82
IRF3-208ENST00000594387 CCDC69A6NI79 296 aa20.19■□□□□ 0.82
IRF3-208ENST00000594387 PRC1O43663 620 aa20.19■□□□□ 0.82
IRF3-208ENST00000594387 ADCYAP1R1P41586 468 aa20.19■□□□□ 0.82
IRF3-208ENST00000594387 TNFAIP2Q03169 654 aa20.19■□□□□ 0.82
IRF3-208ENST00000594387 GRM4Q14833 912 aa20.19■□□□□ 0.82
IRF3-208ENST00000594387 NECTIN1Q15223 517 aa20.19■□□□□ 0.82
IRF3-208ENST00000594387 LRRC26Q2I0M4 334 aa20.19■□□□□ 0.82
IRF3-208ENST00000594387 QRICH1Q2TAL8 776 aa20.19■□□□□ 0.82
IRF3-208ENST00000594387 CHRDL2Q6WN34 429 aa20.19■□□□□ 0.82
IRF3-208ENST00000594387 MB21D2Q8IYB1 491 aaPredicted RBP20.19■□□□□ 0.82
IRF3-208ENST00000594387 PCSK9Q8NBP7 692 aaKnown RBP20.19■□□□□ 0.82
IRF3-208ENST00000594387 RGS22Q8NE09 1264 aa20.19■□□□□ 0.82
IRF3-208ENST00000594387 CTCFLQ8NI51 663 aaPredicted RBP20.19■□□□□ 0.82
IRF3-208ENST00000594387 NUP133Q8WUM0 1156 aa20.19■□□□□ 0.82
IRF3-208ENST00000594387 FGD4Q96M96 766 aa20.19■□□□□ 0.82
IRF3-208ENST00000594387 TSEN34Q9BSV6 310 aaKnown RBP20.19■□□□□ 0.82
IRF3-208ENST00000594387 AMNQ9BXJ7 453 aa20.19■□□□□ 0.82
IRF3-208ENST00000594387 JMJD4Q9H9V9 463 aa20.19■□□□□ 0.82
IRF3-208ENST00000594387 COLQQ9Y215 455 aaPredicted RBP20.19■□□□□ 0.82
IRF3-208ENST00000594387 C6orf222P0C671 652 aaPredicted RBP20.18■□□□□ 0.82
IRF3-208ENST00000594387 KIF5BP33176 963 aa20.18■□□□□ 0.82
IRF3-208ENST00000594387 ALDH5A1P51649 535 aaPredicted RBP20.18■□□□□ 0.82
IRF3-208ENST00000594387 SLC39A5Q6ZMH5 540 aa20.18■□□□□ 0.82
IRF3-208ENST00000594387 STAG2Q8N3U4 1231 aa20.18■□□□□ 0.82
IRF3-208ENST00000594387 DNERQ8NFT8 737 aa20.18■□□□□ 0.82
IRF3-208ENST00000594387 CLEC4DQ8WXI8 215 aa20.18■□□□□ 0.82
IRF3-208ENST00000594387 FERMT2Q96AC1 680 aa20.18■□□□□ 0.82
IRF3-208ENST00000594387 VTA1Q9NP79 307 aa20.18■□□□□ 0.82
IRF3-208ENST00000594387 PPP4R2Q9NY27 417 aa20.18■□□□□ 0.82
IRF3-208ENST00000594387 MAD2L2Q9UI95 211 aa20.18■□□□□ 0.82
IRF3-208ENST00000594387 ZMYND8Q9ULU4 1186 aaPredicted RBP20.18■□□□□ 0.82
IRF3-208ENST00000594387 PALM3A6NDB9 673 aaPredicted RBP20.17■□□□□ 0.82
IRF3-208ENST00000594387 RPS6P62753 249 aaKnown RBP20.17■□□□□ 0.82
IRF3-208ENST00000594387 PDE4DQ08499 809 aa20.17■□□□□ 0.82
IRF3-208ENST00000594387 HABP4Q5JVS0 413 aaKnown RBP20.17■□□□□ 0.82
IRF3-208ENST00000594387 IQSEC1Q6DN90 963 aa20.17■□□□□ 0.82
IRF3-208ENST00000594387 EEPD1Q7L9B9 569 aa20.17■□□□□ 0.82
IRF3-208ENST00000594387 IGDCC4Q8TDY8 1250 aa20.17■□□□□ 0.82
IRF3-208ENST00000594387 VTI1AQ96AJ9 217 aa20.17■□□□□ 0.82
IRF3-208ENST00000594387 AP5M1Q9H0R1 490 aa20.17■□□□□ 0.82
IRF3-208ENST00000594387 PHF24Q9UPV7 400 aa20.17■□□□□ 0.82
IRF3-208ENST00000594387 ATP11BQ9Y2G3 1177 aa20.17■□□□□ 0.82
IRF3-208ENST00000594387 TAF6LQ9Y6J9 622 aa20.17■□□□□ 0.82
IRF3-208ENST00000594387 SYNRGQ9UMZ2 1314 aa20.17■□□□□ 0.82
IRF3-208ENST00000594387 CEP290O15078 2479 aa20.16■□□□□ 0.82
IRF3-208ENST00000594387 MOXD2PA6NHM9 499 aa20.16■□□□□ 0.82
IRF3-208ENST00000594387 ZBTB5O15062 677 aa20.16■□□□□ 0.82
IRF3-208ENST00000594387 CALM1P0DP23 149 aa20.16■□□□□ 0.82
IRF3-208ENST00000594387 CALM2P0DP24 149 aa20.16■□□□□ 0.82
IRF3-208ENST00000594387 CALM3P0DP25 149 aa20.16■□□□□ 0.82
IRF3-208ENST00000594387 SYN1P17600 705 aa20.16■□□□□ 0.82
IRF3-208ENST00000594387 KRT32Q14532 448 aa20.16■□□□□ 0.82
IRF3-208ENST00000594387 GNASQ5JWF2 1037 aa20.16■□□□□ 0.82
IRF3-208ENST00000594387 SLC30A10Q6XR72 485 aa20.16■□□□□ 0.82
IRF3-208ENST00000594387 SYNE3Q6ZMZ3 975 aa20.16■□□□□ 0.82
IRF3-208ENST00000594387 BRCA2P51587 3418 aa20.16■□□□□ 0.82
IRF3-208ENST00000594387 KIAA1217Q5T5P2 1943 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms