RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 B4GALNT3Q6L9W6 998 aa24.16■■□□□ 1.46
TRIM47-207ENST00000593089 NSMFQ6X4W1 530 aa24.16■■□□□ 1.46
TRIM47-207ENST00000593089 RNPC3Q96LT9 517 aaKnown RBP24.16■■□□□ 1.46
TRIM47-207ENST00000593089 YTHDC1Q96MU7 727 aaKnown RBP24.16■■□□□ 1.46
TRIM47-207ENST00000593089 TMEM47Q9BQJ4 181 aa24.16■■□□□ 1.46
TRIM47-207ENST00000593089 CYP39A1Q9NYL5 469 aa24.16■■□□□ 1.46
TRIM47-207ENST00000593089 ASTN1O14525 1302 aa24.15■■□□□ 1.46
TRIM47-207ENST00000593089 MROH7Q68CQ1 1323 aa24.15■■□□□ 1.46
TRIM47-207ENST00000593089 FRMPD2Q68DX3 1309 aaPredicted RBP24.15■■□□□ 1.46
TRIM47-207ENST00000593089 TOP1P11387 765 aaKnown RBP24.15■■□□□ 1.46
TRIM47-207ENST00000593089 BEX3Q00994 111 aa24.15■■□□□ 1.46
TRIM47-207ENST00000593089 LCTP09848 1927 aa24.15■■□□□ 1.46
TRIM47-207ENST00000593089 CCDC171Q6TFL3 1326 aa24.14■■□□□ 1.46
TRIM47-207ENST00000593089 LAMA2P24043 3122 aaKnown RBP24.14■■□□□ 1.46
TRIM47-207ENST00000593089 A0A0U1RQG5 324 aaPredicted RBP24.14■■□□□ 1.45
TRIM47-207ENST00000593089 CTAGE5O15320 804 aa24.14■■□□□ 1.45
TRIM47-207ENST00000593089 ICAM1P05362 532 aa24.14■■□□□ 1.45
TRIM47-207ENST00000593089 CDK7P50613 346 aa24.14■■□□□ 1.45
TRIM47-207ENST00000593089 SMAD3P84022 425 aaKnown RBP24.14■■□□□ 1.45
TRIM47-207ENST00000593089 EEPD1Q7L9B9 569 aa24.14■■□□□ 1.45
TRIM47-207ENST00000593089 RANBP17Q9H2T7 1088 aaKnown RBP24.14■■□□□ 1.45
TRIM47-207ENST00000593089 GPCPD1Q9NPB8 672 aa24.14■■□□□ 1.45
TRIM47-207ENST00000593089 ZMYM6O95789 1325 aa24.13■■□□□ 1.45
TRIM47-207ENST00000593089 ARVCFO00192 962 aa24.13■■□□□ 1.45
TRIM47-207ENST00000593089 TIMP1P01033 207 aa24.13■■□□□ 1.45
TRIM47-207ENST00000593089 SYDE2Q5VT97 1194 aa24.13■■□□□ 1.45
TRIM47-207ENST00000593089 TICAM2Q86XR7 235 aa24.13■■□□□ 1.45
TRIM47-207ENST00000593089 PURBQ96QR8 312 aaKnown RBP24.13■■□□□ 1.45
TRIM47-207ENST00000593089 TCP11L1Q9NUJ3 509 aa24.13■■□□□ 1.45
TRIM47-207ENST00000593089 TBX21Q9UL17 535 aa24.13■■□□□ 1.45
TRIM47-207ENST00000593089 PTGS1P23219 599 aa24.12■■□□□ 1.45
TRIM47-207ENST00000593089 BTNL9Q6UXG8 535 aa24.12■■□□□ 1.45
TRIM47-207ENST00000593089 TLK2Q86UE8 772 aa24.12■■□□□ 1.45
TRIM47-207ENST00000593089 FBXO16Q8IX29 292 aaPredicted RBP24.12■■□□□ 1.45
TRIM47-207ENST00000593089 SMC5Q8IY18 1101 aa24.12■■□□□ 1.45
TRIM47-207ENST00000593089 SEMA6BQ9H3T3 888 aa24.12■■□□□ 1.45
TRIM47-207ENST00000593089 RWDD1Q9H446 243 aaPredicted RBP24.12■■□□□ 1.45
TRIM47-207ENST00000593089 PDGFCQ9NRA1 345 aa24.12■■□□□ 1.45
TRIM47-207ENST00000593089 GNEQ9Y223 722 aaKnown RBP24.12■■□□□ 1.45
TRIM47-207ENST00000593089 SMPD1P17405 629 aa24.11■■□□□ 1.45
TRIM47-207ENST00000593089 NKX3-2P78367 333 aa24.11■■□□□ 1.45
TRIM47-207ENST00000593089 AKNAD1Q5T1N1 836 aa24.11■■□□□ 1.45
TRIM47-207ENST00000593089 MFSD6Q6ZSS7 791 aa24.11■■□□□ 1.45
TRIM47-207ENST00000593089 TBC1D10CQ8IV04 446 aa24.11■■□□□ 1.45
TRIM47-207ENST00000593089 CDX2Q99626 313 aaPredicted RBP24.11■■□□□ 1.45
TRIM47-207ENST00000593089 AP5M1Q9H0R1 490 aa24.11■■□□□ 1.45
TRIM47-207ENST00000593089 DYNC1LI2O43237 492 aaPredicted RBP24.1■■□□□ 1.45
TRIM47-207ENST00000593089 SDSP20132 328 aa24.1■■□□□ 1.45
TRIM47-207ENST00000593089 AAMPQ13685 434 aa24.1■■□□□ 1.45
TRIM47-207ENST00000593089 TAPT1Q6NXT6 567 aa24.1■■□□□ 1.45
TRIM47-207ENST00000593089 CXCL17Q6UXB2 119 aa24.1■■□□□ 1.45
TRIM47-207ENST00000593089 FAM126BQ8IXS8 530 aa24.1■■□□□ 1.45
TRIM47-207ENST00000593089 TTYH1Q9H313 450 aaPredicted RBP24.1■■□□□ 1.45
TRIM47-207ENST00000593089 NFIBO00712 420 aa24.09■■□□□ 1.45
TRIM47-207ENST00000593089 TLR3O15455 904 aaKnown RBP24.09■■□□□ 1.45
TRIM47-207ENST00000593089 PDHBP11177 359 aa24.09■■□□□ 1.45
TRIM47-207ENST00000593089 BAATQ14032 418 aaPredicted RBP24.09■■□□□ 1.45
TRIM47-207ENST00000593089 FSCN1Q16658 493 aaKnown RBP24.09■■□□□ 1.45
TRIM47-207ENST00000593089 TMEM63BQ5T3F8 832 aa24.09■■□□□ 1.45
TRIM47-207ENST00000593089 MFSD5Q6N075 450 aa24.09■■□□□ 1.45
TRIM47-207ENST00000593089 CHD1LQ86WJ1 897 aa24.09■■□□□ 1.45
TRIM47-207ENST00000593089 PPP1R12CQ9BZL4 782 aa24.09■■□□□ 1.45
TRIM47-207ENST00000593089 PTPDC1A2A3K4 754 aa24.08■■□□□ 1.45
TRIM47-207ENST00000593089 IGHDP01880 384 aa24.08■■□□□ 1.45
TRIM47-207ENST00000593089 MFAP1P55081 439 aaKnown RBP24.08■■□□□ 1.45
TRIM47-207ENST00000593089 IQSEC1Q6DN90 963 aa24.08■■□□□ 1.45
TRIM47-207ENST00000593089 PLEKHM2Q8IWE5 1019 aa24.08■■□□□ 1.45
TRIM47-207ENST00000593089 TTC14Q96N46 770 aa24.08■■□□□ 1.45
TRIM47-207ENST00000593089 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.08■■□□□ 1.451e-6■□□□□ 8.5
TRIM47-207ENST00000593089 ADD3Q9UEY8 706 aaKnown RBP24.08■■□□□ 1.45
TRIM47-207ENST00000593089 NEDD4P46934 1319 aa24.08■■□□□ 1.44
TRIM47-207ENST00000593089 PCP11498 1178 aaKnown RBP24.07■■□□□ 1.44
TRIM47-207ENST00000593089 ALDH5A1P51649 535 aaPredicted RBP24.07■■□□□ 1.44
TRIM47-207ENST00000593089 KIAA1211Q6ZU35 1233 aa24.07■■□□□ 1.44
TRIM47-207ENST00000593089 MORC4Q8TE76 937 aa24.07■■□□□ 1.44
TRIM47-207ENST00000593089 MYLIPQ8WY64 445 aa24.07■■□□□ 1.44
TRIM47-207ENST00000593089 ZKSCAN3Q9BRR0 538 aa24.07■■□□□ 1.44
TRIM47-207ENST00000593089 RNF41Q9H4P4 317 aaPredicted RBP24.07■■□□□ 1.44
TRIM47-207ENST00000593089 VTA1Q9NP79 307 aa24.07■■□□□ 1.44
TRIM47-207ENST00000593089 LAMA4Q16363 1823 aa24.06■■□□□ 1.44
TRIM47-207ENST00000593089 ZEB2O60315 1214 aa24.06■■□□□ 1.44
TRIM47-207ENST00000593089 CABYRO75952 493 aa24.06■■□□□ 1.44
TRIM47-207ENST00000593089 CSF2RAP15509 400 aa24.06■■□□□ 1.44
TRIM47-207ENST00000593089 CALML3P27482 149 aa24.06■■□□□ 1.44
TRIM47-207ENST00000593089 NUCB1Q02818 461 aa24.06■■□□□ 1.44
TRIM47-207ENST00000593089 ZNF543Q08ER8 600 aa24.06■■□□□ 1.44
TRIM47-207ENST00000593089 PPIGQ13427 754 aaKnown RBP eCLIP24.06■■□□□ 1.441e-6■□□□□ 11
TRIM47-207ENST00000593089 CWC27Q6UX04 472 aaKnown RBP24.06■■□□□ 1.44
TRIM47-207ENST00000593089 SLC30A10Q6XR72 485 aa24.06■■□□□ 1.44
TRIM47-207ENST00000593089 TMEM199Q8N511 208 aa24.06■■□□□ 1.44
TRIM47-207ENST00000593089 ESR2Q92731 530 aa24.06■■□□□ 1.44
TRIM47-207ENST00000593089 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.05■■□□□ 1.44
TRIM47-207ENST00000593089 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.05■■□□□ 1.44
TRIM47-207ENST00000593089 ZNF213O14771 459 aa24.05■■□□□ 1.44
TRIM47-207ENST00000593089 CD4P01730 458 aa24.05■■□□□ 1.44
TRIM47-207ENST00000593089 ITGA7Q13683 1181 aa24.05■■□□□ 1.44
TRIM47-207ENST00000593089 C16orf59Q7L2K0 433 aa24.05■■□□□ 1.44
TRIM47-207ENST00000593089 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.05■■□□□ 1.44
TRIM47-207ENST00000593089 EXOC6Q8TAG9 804 aa24.05■■□□□ 1.44
TRIM47-207ENST00000593089 CLEC4DQ8WXI8 215 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms