RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 NPLOC4Q8TAT6 608 aa8.7□□□□□ -1.02
VMP1-215ENST00000592619 MAGEB10Q96LZ2 347 aaPredicted RBP8.7□□□□□ -1.02
VMP1-215ENST00000592619 ZFYVE21Q9BQ24 234 aa8.7□□□□□ -1.02
VMP1-215ENST00000592619 TRIT1Q9H3H1 467 aaKnown RBP8.7□□□□□ -1.02
VMP1-215ENST00000592619 MKNK2Q9HBH9 465 aa8.7□□□□□ -1.02
VMP1-215ENST00000592619 HOMER2Q9NSB8 354 aa8.7□□□□□ -1.02
VMP1-215ENST00000592619 GPATCH2Q9NW75 528 aa8.7□□□□□ -1.02
VMP1-215ENST00000592619 KLHL42Q9P2K6 505 aa8.7□□□□□ -1.02
VMP1-215ENST00000592619 TNPO3Q9Y5L0 923 aaKnown RBP8.7□□□□□ -1.02
VMP1-215ENST00000592619 NPFFR2Q9Y5X5 522 aa8.7□□□□□ -1.02
VMP1-215ENST00000592619 BACE2Q9Y5Z0 518 aa8.7□□□□□ -1.02
VMP1-215ENST00000592619 C2orf71A6NGG8 1288 aa8.69□□□□□ -1.02
VMP1-215ENST00000592619 MEIS1O00470 390 aa8.69□□□□□ -1.02
VMP1-215ENST00000592619 MARCH6O60337 910 aa8.69□□□□□ -1.02
VMP1-215ENST00000592619 NAT1P18440 290 aa8.69□□□□□ -1.02
VMP1-215ENST00000592619 IGFALSP35858 605 aa8.69□□□□□ -1.02
VMP1-215ENST00000592619 CRTC3Q6UUV7 619 aa8.69□□□□□ -1.02
VMP1-215ENST00000592619 USP53Q70EK8 1073 aa8.69□□□□□ -1.02
VMP1-215ENST00000592619 ZNF765Q7L2R6 523 aa8.69□□□□□ -1.02
VMP1-215ENST00000592619 FERMT3Q86UX7 667 aa8.69□□□□□ -1.02
VMP1-215ENST00000592619 TCTN2Q96GX1 697 aa8.69□□□□□ -1.02
VMP1-215ENST00000592619 FCRL3Q96P31 734 aaPredicted RBP8.69□□□□□ -1.02
VMP1-215ENST00000592619 TCRBV16S1A1N1A0A5B0 115 aa8.68□□□□□ -1.02
VMP1-215ENST00000592619 FAM170BA6NMN3 283 aa8.68□□□□□ -1.02
VMP1-215ENST00000592619 C1QTNF9BB2RNN3 333 aa8.68□□□□□ -1.02
VMP1-215ENST00000592619 B4E1Z4 1266 aa8.68□□□□□ -1.02
VMP1-215ENST00000592619 ALG1L2C9J202 215 aa8.68□□□□□ -1.02
VMP1-215ENST00000592619 MSTNO14793 375 aa8.68□□□□□ -1.02
VMP1-215ENST00000592619 OPA1O60313 960 aa8.68□□□□□ -1.02
VMP1-215ENST00000592619 THBDP07204 575 aa8.68□□□□□ -1.02
VMP1-215ENST00000592619 CD3EP07766 207 aa8.68□□□□□ -1.02
VMP1-215ENST00000592619 CPEP16870 476 aa8.68□□□□□ -1.02
VMP1-215ENST00000592619 FLT3P36888 993 aa8.68□□□□□ -1.02
VMP1-215ENST00000592619 DUSP27Q5VZP5 1158 aa8.68□□□□□ -1.02
VMP1-215ENST00000592619 E4F1Q66K89 784 aaPredicted RBP8.68□□□□□ -1.02
VMP1-215ENST00000592619 RNF43Q68DV7 783 aa8.68□□□□□ -1.02
VMP1-215ENST00000592619 RCSD1Q6JBY9 416 aa8.68□□□□□ -1.02
VMP1-215ENST00000592619 FRS2Q8WU20 508 aa8.68□□□□□ -1.02
VMP1-215ENST00000592619 SLC12A9Q9BXP2 914 aa8.68□□□□□ -1.02
VMP1-215ENST00000592619 ASXL2Q76L83 1435 aa8.68□□□□□ -1.02
VMP1-215ENST00000592619 FAM155AB1AL88 458 aaPredicted RBP8.67□□□□□ -1.02
VMP1-215ENST00000592619 STXBP3O00186 592 aa8.67□□□□□ -1.02
VMP1-215ENST00000592619 EYA4O95677 639 aa8.67□□□□□ -1.02
VMP1-215ENST00000592619 VAV1P15498 845 aa8.67□□□□□ -1.02
VMP1-215ENST00000592619 OXCT1P55809 520 aa8.67□□□□□ -1.02
VMP1-215ENST00000592619 EXOSC10Q01780 885 aaKnown RBP8.67□□□□□ -1.02
VMP1-215ENST00000592619 DHCR24Q15392 516 aa8.67□□□□□ -1.02
VMP1-215ENST00000592619 PRR23CQ6ZRP0 262 aa8.67□□□□□ -1.02
VMP1-215ENST00000592619 TSPYL5Q86VY4 417 aaPredicted RBP8.67□□□□□ -1.02
VMP1-215ENST00000592619 ANKLE2Q86XL3 938 aa8.67□□□□□ -1.02
VMP1-215ENST00000592619 SHISA5Q8N114 240 aa8.67□□□□□ -1.02
VMP1-215ENST00000592619 LINC00116Q8NCU8 138 aa8.67□□□□□ -1.02
VMP1-215ENST00000592619 MTFR1LQ9H019 292 aa8.67□□□□□ -1.02
VMP1-215ENST00000592619 GPR27Q9NS67 375 aa8.67□□□□□ -1.02
VMP1-215ENST00000592619 TRAF6Q9Y4K3 522 aa8.67□□□□□ -1.02
VMP1-215ENST00000592619 ZNF205O95201 554 aa8.66□□□□□ -1.02
VMP1-215ENST00000592619 CRTAMO95727 393 aa8.66□□□□□ -1.02
VMP1-215ENST00000592619 S100BP04271 92 aaPredicted RBP8.66□□□□□ -1.02
VMP1-215ENST00000592619 APPP05067 770 aa8.66□□□□□ -1.02
VMP1-215ENST00000592619 ZNF460Q14592 562 aa8.66□□□□□ -1.02
VMP1-215ENST00000592619 NKPD1Q17RQ9 610 aa8.66□□□□□ -1.02
VMP1-215ENST00000592619 EEF1DP3Q658K8 133 aa8.66□□□□□ -1.02
VMP1-215ENST00000592619 WWC2Q6AWC2 1192 aa8.66□□□□□ -1.02
VMP1-215ENST00000592619 IQCEQ6IPM2 695 aa8.66□□□□□ -1.02
VMP1-215ENST00000592619 PPIL6Q8IXY8 311 aa8.66□□□□□ -1.02
VMP1-215ENST00000592619 LEO1Q8WVC0 666 aaPredicted RBP8.66□□□□□ -1.02
VMP1-215ENST00000592619 TP53INP1Q96A56 240 aa8.66□□□□□ -1.02
VMP1-215ENST00000592619 DCAF5Q96JK2 942 aa8.66□□□□□ -1.02
VMP1-215ENST00000592619 MFSD14AQ96MC6 490 aa8.66□□□□□ -1.02
VMP1-215ENST00000592619 ORAI3Q9BRQ5 295 aa8.66□□□□□ -1.02
VMP1-215ENST00000592619 GPRC5CQ9NQ84 441 aa8.66□□□□□ -1.02
VMP1-215ENST00000592619 ARNTLO00327 626 aa8.65□□□□□ -1.02
VMP1-215ENST00000592619 MEFVO15553 781 aaPredicted RBP8.65□□□□□ -1.02
VMP1-215ENST00000592619 RASGRP1O95267 797 aa8.65□□□□□ -1.02
VMP1-215ENST00000592619 F13BP05160 661 aa8.65□□□□□ -1.02
VMP1-215ENST00000592619 IFNGR1P15260 489 aa8.65□□□□□ -1.02
VMP1-215ENST00000592619 GATA4P43694 442 aa8.65□□□□□ -1.02
VMP1-215ENST00000592619 SEPHS1P49903 392 aa8.65□□□□□ -1.02
VMP1-215ENST00000592619 NEK4P51957 841 aa8.65□□□□□ -1.02
VMP1-215ENST00000592619 GPR85P60893 370 aa8.65□□□□□ -1.02
VMP1-215ENST00000592619 PCBP1Q15365 356 aaKnown RBP eCLIP8.65□□□□□ -1.02
VMP1-215ENST00000592619 CPSF6Q16630 551 aaKnown RBP eCLIP8.65□□□□□ -1.02
VMP1-215ENST00000592619 PLA2G4EQ3MJ16 856 aa8.65□□□□□ -1.02
VMP1-215ENST00000592619 KCNT2Q6UVM3 1135 aa8.65□□□□□ -1.02
VMP1-215ENST00000592619 UBE2R2Q712K3 238 aaPredicted RBP8.65□□□□□ -1.02
VMP1-215ENST00000592619 THAP5Q7Z6K1 395 aa8.65□□□□□ -1.02
VMP1-215ENST00000592619 STRA8Q7Z7C7 330 aa8.65□□□□□ -1.02
VMP1-215ENST00000592619 IFNL3Q8IZI9 196 aa8.65□□□□□ -1.02
VMP1-215ENST00000592619 FBXL6Q8N531 539 aa8.65□□□□□ -1.02
VMP1-215ENST00000592619 USHBP1Q8N6Y0 703 aa8.65□□□□□ -1.02
VMP1-215ENST00000592619 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.65□□□□□ -1.02
VMP1-215ENST00000592619 SPOCK3Q9BQ16 436 aa8.65□□□□□ -1.02
VMP1-215ENST00000592619 METTL22Q9BUU2 404 aaPredicted RBP8.65□□□□□ -1.02
VMP1-215ENST00000592619 ITGB2P05107 769 aa8.64□□□□□ -1.03
VMP1-215ENST00000592619 JMJD7P0C870 316 aa8.64□□□□□ -1.03
VMP1-215ENST00000592619 LTBRP36941 435 aa8.64□□□□□ -1.03
VMP1-215ENST00000592619 PCBP3P57721 371 aaKnown RBP8.64□□□□□ -1.03
VMP1-215ENST00000592619 EVA1CP58658 441 aa8.64□□□□□ -1.03
VMP1-215ENST00000592619 KCNAB2Q13303 367 aa8.64□□□□□ -1.03
VMP1-215ENST00000592619 GAB4Q2WGN9 574 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms