RNA–Protein interactions for RNA: ENST00000592078.1

CXXC1-217, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-217ENST00000592078 TNFRSF10AO00220 468 aa18.13■□□□□ 0.49
CXXC1-217ENST00000592078 CABYRO75952 493 aa18.13■□□□□ 0.49
CXXC1-217ENST00000592078 SLC3A2P08195 630 aaKnown RBP18.13■□□□□ 0.49
CXXC1-217ENST00000592078 CDK7P50613 346 aa18.13■□□□□ 0.49
CXXC1-217ENST00000592078 EVX2Q03828 476 aa18.13■□□□□ 0.49
CXXC1-217ENST00000592078 CTDSPL2Q05D32 466 aa18.13■□□□□ 0.49
CXXC1-217ENST00000592078 RAB30Q15771 203 aa18.13■□□□□ 0.49
CXXC1-217ENST00000592078 CCSAPQ6IQ19 270 aaPredicted RBP18.13■□□□□ 0.49
CXXC1-217ENST00000592078 CHST13Q8NET6 341 aa18.13■□□□□ 0.49
CXXC1-217ENST00000592078 TBX21Q9UL17 535 aa18.13■□□□□ 0.49
CXXC1-217ENST00000592078 SMCHD1A6NHR9 2005 aa18.12■□□□□ 0.49
CXXC1-217ENST00000592078 PSMA5P28066 241 aa18.12■□□□□ 0.49
CXXC1-217ENST00000592078 EPHB4P54760 987 aa18.12■□□□□ 0.49
CXXC1-217ENST00000592078 GJA9P57773 515 aa18.12■□□□□ 0.49
CXXC1-217ENST00000592078 NKX3-2P78367 333 aa18.12■□□□□ 0.49
CXXC1-217ENST00000592078 ACVR2BQ13705 512 aa18.12■□□□□ 0.49
CXXC1-217ENST00000592078 GRIN2CQ14957 1233 aa18.12■□□□□ 0.49
CXXC1-217ENST00000592078 FAM83BQ5T0W9 1011 aa18.12■□□□□ 0.49
CXXC1-217ENST00000592078 SNRNP48Q6IEG0 339 aaKnown RBP18.12■□□□□ 0.49
CXXC1-217ENST00000592078 MFSD6Q6ZSS7 791 aa18.12■□□□□ 0.49
CXXC1-217ENST00000592078 NEK1Q96PY6 1258 aa18.12■□□□□ 0.49
CXXC1-217ENST00000592078 CNNM2Q9H8M5 875 aa18.12■□□□□ 0.49
CXXC1-217ENST00000592078 MKNK2Q9HBH9 465 aa18.12■□□□□ 0.49
CXXC1-217ENST00000592078 FBXO28Q9NVF7 368 aa18.12■□□□□ 0.49
CXXC1-217ENST00000592078 PARP14Q460N5 1801 aa18.12■□□□□ 0.49
CXXC1-217ENST00000592078 ARVCFO00192 962 aa18.11■□□□□ 0.49
CXXC1-217ENST00000592078 RAD21O60216 631 aa18.11■□□□□ 0.49
CXXC1-217ENST00000592078 SNAI1O95863 264 aaPredicted RBP18.11■□□□□ 0.49
CXXC1-217ENST00000592078 HMGB1P09429 215 aaKnown RBP18.11■□□□□ 0.49
CXXC1-217ENST00000592078 C6orf222P0C671 652 aaPredicted RBP18.11■□□□□ 0.49
CXXC1-217ENST00000592078 TAL1P17542 331 aaPredicted RBP18.11■□□□□ 0.49
CXXC1-217ENST00000592078 EXOSC10Q01780 885 aaKnown RBP18.11■□□□□ 0.49
CXXC1-217ENST00000592078 PDE4BQ07343 736 aa18.11■□□□□ 0.49
CXXC1-217ENST00000592078 RASIP1Q5U651 963 aa18.11■□□□□ 0.49
CXXC1-217ENST00000592078 FBXL16Q8N461 479 aa18.11■□□□□ 0.49
CXXC1-217ENST00000592078 VTI1AQ96AJ9 217 aa18.11■□□□□ 0.49
CXXC1-217ENST00000592078 UPF3AQ9H1J1 476 aaKnown RBP18.11■□□□□ 0.49
CXXC1-217ENST00000592078 ALDH8A1Q9H2A2 487 aaPredicted RBP18.11■□□□□ 0.49
CXXC1-217ENST00000592078 TSPYL2Q9H2G4 693 aaPredicted RBP18.11■□□□□ 0.49
CXXC1-217ENST00000592078 INCENPQ9NQS7 918 aa18.11■□□□□ 0.49
CXXC1-217ENST00000592078 TSHZ2Q9NRE2 1034 aa18.11■□□□□ 0.49
CXXC1-217ENST00000592078 MSRAQ9UJ68 235 aa18.11■□□□□ 0.49
CXXC1-217ENST00000592078 FEM1BQ9UK73 627 aa18.11■□□□□ 0.49
CXXC1-217ENST00000592078 PLXNA1Q9UIW2 1896 aa18.1■□□□□ 0.49
CXXC1-217ENST00000592078 F5H6K3 240 aa18.1■□□□□ 0.49
CXXC1-217ENST00000592078 ASGR1P07306 291 aa18.1■□□□□ 0.49
CXXC1-217ENST00000592078 KLRC3Q07444 240 aa18.1■□□□□ 0.49
CXXC1-217ENST00000592078 RABEP1Q15276 862 aa18.1■□□□□ 0.49
CXXC1-217ENST00000592078 PPP4R3BQ5MIZ7 849 aa18.1■□□□□ 0.49
CXXC1-217ENST00000592078 TMEM240Q5SV17 173 aa18.1■□□□□ 0.49
CXXC1-217ENST00000592078 MB21D2Q8IYB1 491 aaPredicted RBP18.1■□□□□ 0.49
CXXC1-217ENST00000592078 ANKRD35Q8N283 1001 aa18.1■□□□□ 0.49
CXXC1-217ENST00000592078 NCOA7Q8NI08 942 aa18.1■□□□□ 0.49
CXXC1-217ENST00000592078 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.1■□□□□ 0.497e-8■■■□□ 14.7
CXXC1-217ENST00000592078 MTA3Q9BTC8 594 aa18.1■□□□□ 0.49
CXXC1-217ENST00000592078 KRT23Q9C075 422 aa18.1■□□□□ 0.49
CXXC1-217ENST00000592078 ZHX1Q9UKY1 873 aaPredicted RBP18.1■□□□□ 0.49
CXXC1-217ENST00000592078 WDR19Q8NEZ3 1342 aa18.09■□□□□ 0.49
CXXC1-217ENST00000592078 COL9A3Q14050 684 aaPredicted RBP18.09■□□□□ 0.49
CXXC1-217ENST00000592078 GNASQ5JWF2 1037 aa18.09■□□□□ 0.49
CXXC1-217ENST00000592078 DHX32Q7L7V1 743 aaKnown RBP18.09■□□□□ 0.49
CXXC1-217ENST00000592078 CLEC10AQ8IUN9 316 aa18.09■□□□□ 0.49
CXXC1-217ENST00000592078 MKL1Q969V6 931 aa18.09■□□□□ 0.49
CXXC1-217ENST00000592078 JAKMIP1Q96N16 626 aaKnown RBP18.09■□□□□ 0.49
CXXC1-217ENST00000592078 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.09■□□□□ 0.49
CXXC1-217ENST00000592078 NEDD4P46934 1319 aa18.08■□□□□ 0.49
CXXC1-217ENST00000592078 COL11A1P12107 1806 aaPredicted RBP18.08■□□□□ 0.48
CXXC1-217ENST00000592078 ZEB2O60315 1214 aa18.08■□□□□ 0.48
CXXC1-217ENST00000592078 RASA1P20936 1047 aa18.08■□□□□ 0.48
CXXC1-217ENST00000592078 TRDNQ13061 729 aa18.08■□□□□ 0.48
CXXC1-217ENST00000592078 RUFY3Q7L099 469 aa18.08■□□□□ 0.48
CXXC1-217ENST00000592078 TTC14Q96N46 770 aa18.08■□□□□ 0.48
CXXC1-217ENST00000592078 SLC38A10Q9HBR0 1119 aa18.08■□□□□ 0.48
CXXC1-217ENST00000592078 TCP11L1Q9NUJ3 509 aa18.08■□□□□ 0.48
CXXC1-217ENST00000592078 ZSWIM5Q9P217 1185 aa18.08■□□□□ 0.48
CXXC1-217ENST00000592078 THEGQ9P2T0 379 aa18.08■□□□□ 0.48
CXXC1-217ENST00000592078 BAZ2AQ9UIF9 1905 aaKnown RBP18.08■□□□□ 0.48
CXXC1-217ENST00000592078 ASB14A6NK59 587 aa18.07■□□□□ 0.48
CXXC1-217ENST00000592078 RPS6KB1P23443 525 aa18.07■□□□□ 0.48
CXXC1-217ENST00000592078 MRPS5P82675 430 aaKnown RBP18.07■□□□□ 0.48
CXXC1-217ENST00000592078 TKFCQ3LXA3 575 aa18.07■□□□□ 0.48
CXXC1-217ENST00000592078 CCDC144BQ3MJ40 725 aa18.07■□□□□ 0.48
CXXC1-217ENST00000592078 FAM126BQ8IXS8 530 aa18.07■□□□□ 0.48
CXXC1-217ENST00000592078 RPUSD2Q8IZ73 545 aaKnown RBP18.07■□□□□ 0.48
CXXC1-217ENST00000592078 ZNF444Q8N0Y2 327 aaPredicted RBP18.07■□□□□ 0.48
CXXC1-217ENST00000592078 HERVK_113Q902F9 699 aa18.07■□□□□ 0.48
CXXC1-217ENST00000592078 ESR2Q92731 530 aa18.07■□□□□ 0.48
CXXC1-217ENST00000592078 PBX4Q9BYU1 374 aa18.07■□□□□ 0.48
CXXC1-217ENST00000592078 AGXT2Q9BYV1 514 aa18.07■□□□□ 0.48
CXXC1-217ENST00000592078 IL23AQ9NPF7 189 aa18.07■□□□□ 0.48
CXXC1-217ENST00000592078 Q9Y3F1 56 aa18.07■□□□□ 0.48
CXXC1-217ENST00000592078 NDUFB10O96000 172 aa18.06■□□□□ 0.48
CXXC1-217ENST00000592078 FGBP02675 491 aa18.06■□□□□ 0.48
CXXC1-217ENST00000592078 CASTP20810 708 aaKnown RBP18.06■□□□□ 0.48
CXXC1-217ENST00000592078 MCM5P33992 734 aa18.06■□□□□ 0.48
CXXC1-217ENST00000592078 NOVP48745 357 aa18.06■□□□□ 0.48
CXXC1-217ENST00000592078 ANTXR2P58335 489 aa18.06■□□□□ 0.48
CXXC1-217ENST00000592078 BLOC1S2Q6QNY1 142 aa18.06■□□□□ 0.48
CXXC1-217ENST00000592078 GMCL1P1Q8NEA9 526 aa18.06■□□□□ 0.48
CXXC1-217ENST00000592078 CHURC1Q8WUH1 139 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms