RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 TMEM87BQ96K49 555 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 FGD4Q96M96 766 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 JMJD4Q9H9V9 463 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 VAT1LQ9HCJ6 419 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 GPHNQ9NQX3 736 aaPredicted RBP10.72□□□□□ -0.69
DNMT1-223ENST00000591239 CYP39A1Q9NYL5 469 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 NRBP1Q9UHY1 535 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 CNPY2Q9Y2B0 182 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 WDR19Q8NEZ3 1342 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 SYNGAP1Q96PV0 1343 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 SOWAHBA6NEL2 793 aa10.71□□□□□ -0.69
DNMT1-223ENST00000591239 DHX16O60231 1041 aaKnown RBP10.71□□□□□ -0.69
DNMT1-223ENST00000591239 REC8O95072 547 aa10.71□□□□□ -0.69
DNMT1-223ENST00000591239 SNAI1O95863 264 aaPredicted RBP10.71□□□□□ -0.69
DNMT1-223ENST00000591239 MNX1P50219 401 aaPredicted RBP10.71□□□□□ -0.69
DNMT1-223ENST00000591239 GRM4Q14833 912 aa10.71□□□□□ -0.69
DNMT1-223ENST00000591239 CDC37Q16543 378 aaPredicted RBP10.71□□□□□ -0.69
DNMT1-223ENST00000591239 QRICH1Q2TAL8 776 aa10.71□□□□□ -0.69
DNMT1-223ENST00000591239 USH1GQ495M9 461 aa10.71□□□□□ -0.69
DNMT1-223ENST00000591239 ANO1Q5XXA6 986 aa10.71□□□□□ -0.69
DNMT1-223ENST00000591239 NECAB2Q7Z6G3 386 aa10.71□□□□□ -0.69
DNMT1-223ENST00000591239 TMTC2Q8N394 836 aa10.71□□□□□ -0.69
DNMT1-223ENST00000591239 DIS3LQ8TF46 1054 aaKnown RBP10.71□□□□□ -0.69
DNMT1-223ENST00000591239 CLEC4DQ8WXI8 215 aa10.71□□□□□ -0.69
DNMT1-223ENST00000591239 NEK1Q96PY6 1258 aa10.71□□□□□ -0.69
DNMT1-223ENST00000591239 PTPDC1A2A3K4 754 aa10.7□□□□□ -0.7
DNMT1-223ENST00000591239 CCDC69A6NI79 296 aa10.7□□□□□ -0.7
DNMT1-223ENST00000591239 SH2B2O14492 632 aaPredicted RBP10.7□□□□□ -0.7
DNMT1-223ENST00000591239 ZNF865P0CJ78 1059 aaPredicted RBP10.7□□□□□ -0.7
DNMT1-223ENST00000591239 LIFRP42702 1097 aa10.7□□□□□ -0.7
DNMT1-223ENST00000591239 BAATQ14032 418 aaPredicted RBP10.7□□□□□ -0.7
DNMT1-223ENST00000591239 KRT32Q14532 448 aa10.7□□□□□ -0.7
DNMT1-223ENST00000591239 ADCK5Q3MIX3 580 aa10.7□□□□□ -0.7
DNMT1-223ENST00000591239 NFXL1Q6ZNB6 911 aa10.7□□□□□ -0.7
DNMT1-223ENST00000591239 ARMCX2Q7L311 632 aa10.7□□□□□ -0.7
DNMT1-223ENST00000591239 FBXO11Q86XK2 927 aa10.7□□□□□ -0.7
DNMT1-223ENST00000591239 CCDC144CPQ8IYA2 1237 aa10.7□□□□□ -0.7
DNMT1-223ENST00000591239 ZNF654Q8IZM8 581 aa10.7□□□□□ -0.7
DNMT1-223ENST00000591239 NUP133Q8WUM0 1156 aa10.7□□□□□ -0.7
DNMT1-223ENST00000591239 MTMR8Q96EF0 704 aa10.7□□□□□ -0.7
DNMT1-223ENST00000591239 MAP3K14Q99558 947 aa10.7□□□□□ -0.7
DNMT1-223ENST00000591239 MYL10Q9BUA6 226 aa10.7□□□□□ -0.7
DNMT1-223ENST00000591239 HTATIP2Q9BUP3 242 aa10.7□□□□□ -0.7
DNMT1-223ENST00000591239 LRRC2Q9BYS8 371 aa10.7□□□□□ -0.7
DNMT1-223ENST00000591239 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.7□□□□□ -0.7
DNMT1-223ENST00000591239 ASTN1O14525 1302 aa10.69□□□□□ -0.7
DNMT1-223ENST00000591239 ABCB11O95342 1321 aa10.69□□□□□ -0.7
DNMT1-223ENST00000591239 ASB14A6NK59 587 aa10.69□□□□□ -0.7
DNMT1-223ENST00000591239 DDAH1O94760 285 aa10.69□□□□□ -0.7
DNMT1-223ENST00000591239 RARBP10826 455 aa10.69□□□□□ -0.7
DNMT1-223ENST00000591239 HSPA4P34932 840 aa10.69□□□□□ -0.7
DNMT1-223ENST00000591239 EXOSC10Q01780 885 aaKnown RBP10.69□□□□□ -0.7
DNMT1-223ENST00000591239 ACVR2BQ13705 512 aa10.69□□□□□ -0.7
DNMT1-223ENST00000591239 SLC35G1Q2M3R5 365 aa10.69□□□□□ -0.7
DNMT1-223ENST00000591239 RNF207Q6ZRF8 634 aa10.69□□□□□ -0.7
DNMT1-223ENST00000591239 DHX32Q7L7V1 743 aaKnown RBP10.69□□□□□ -0.7
DNMT1-223ENST00000591239 ARRDC4Q8NCT1 418 aa10.69□□□□□ -0.7
DNMT1-223ENST00000591239 RGS22Q8NE09 1264 aa10.69□□□□□ -0.7
DNMT1-223ENST00000591239 DPF3Q92784 378 aa10.69□□□□□ -0.7
DNMT1-223ENST00000591239 KCNB2Q92953 911 aa10.69□□□□□ -0.7
DNMT1-223ENST00000591239 PURBQ96QR8 312 aaKnown RBP10.69□□□□□ -0.7
DNMT1-223ENST00000591239 ABHD16BQ9H3Z7 469 aa10.69□□□□□ -0.7
DNMT1-223ENST00000591239 C11orf49Q9H6J7 331 aa10.69□□□□□ -0.7
DNMT1-223ENST00000591239 RIOX1Q9H6W3 641 aa10.69□□□□□ -0.7
DNMT1-223ENST00000591239 ZHX1Q9UKY1 873 aaPredicted RBP10.69□□□□□ -0.7
DNMT1-223ENST00000591239 FAM184BQ9ULE4 1060 aa10.69□□□□□ -0.7
DNMT1-223ENST00000591239 DNM1LO00429 736 aa10.68□□□□□ -0.7
DNMT1-223ENST00000591239 ZBTB5O15062 677 aa10.68□□□□□ -0.7
DNMT1-223ENST00000591239 CYTH3O43739 400 aa10.68□□□□□ -0.7
DNMT1-223ENST00000591239 HMGB1P09429 215 aaKnown RBP10.68□□□□□ -0.7
DNMT1-223ENST00000591239 COL6A1P12109 1028 aa10.68□□□□□ -0.7
DNMT1-223ENST00000591239 AKR1A1P14550 325 aa10.68□□□□□ -0.7
DNMT1-223ENST00000591239 CALML3P27482 149 aa10.68□□□□□ -0.7
DNMT1-223ENST00000591239 KIF5BP33176 963 aa10.68□□□□□ -0.7
DNMT1-223ENST00000591239 RPS6P62753 249 aaKnown RBP10.68□□□□□ -0.7
DNMT1-223ENST00000591239 PRPF38BQ5VTL8 546 aaKnown RBP10.68□□□□□ -0.7
DNMT1-223ENST00000591239 SLC30A10Q6XR72 485 aa10.68□□□□□ -0.7
DNMT1-223ENST00000591239 SGMS1Q86VZ5 419 aa10.68□□□□□ -0.7
DNMT1-223ENST00000591239 POTEDQ86YR6 584 aa10.68□□□□□ -0.7
DNMT1-223ENST00000591239 CTCFLQ8NI51 663 aaPredicted RBP10.68□□□□□ -0.7
DNMT1-223ENST00000591239 TCEANC2Q96MN5 208 aa10.68□□□□□ -0.7
DNMT1-223ENST00000591239 AMNQ9BXJ7 453 aa10.68□□□□□ -0.7
DNMT1-223ENST00000591239 MAF1Q9H063 256 aa10.68□□□□□ -0.7
DNMT1-223ENST00000591239 XPNPEP3Q9NQH7 507 aa10.68□□□□□ -0.7
DNMT1-223ENST00000591239 ADD3Q9UEY8 706 aaKnown RBP10.68□□□□□ -0.7
DNMT1-223ENST00000591239 MRPL11Q9Y3B7 192 aaKnown RBP10.68□□□□□ -0.7
DNMT1-223ENST00000591239 SNX14Q9Y5W7 946 aa10.68□□□□□ -0.7
DNMT1-223ENST00000591239 SLC12A7Q9Y666 1083 aa10.68□□□□□ -0.7
DNMT1-223ENST00000591239 DDX49Q9Y6V7 483 aaKnown RBP10.68□□□□□ -0.7
DNMT1-223ENST00000591239 RANBP2P49792 3224 aaKnown RBP10.68□□□□□ -0.7
DNMT1-223ENST00000591239 FRMPD3Q5JV73 1810 aa10.68□□□□□ -0.7
DNMT1-223ENST00000591239 MCM3APO60318 1980 aa10.67□□□□□ -0.7
DNMT1-223ENST00000591239 PNMA6FA0A0J9YX94 578 aa10.67□□□□□ -0.7
DNMT1-223ENST00000591239 EPB41L2O43491 1005 aaKnown RBP10.67□□□□□ -0.7
DNMT1-223ENST00000591239 PPP1R11O60927 126 aaPredicted RBP10.67□□□□□ -0.7
DNMT1-223ENST00000591239 CALM1P0DP23 149 aa10.67□□□□□ -0.7
DNMT1-223ENST00000591239 CALM2P0DP24 149 aa10.67□□□□□ -0.7
DNMT1-223ENST00000591239 CALM3P0DP25 149 aa10.67□□□□□ -0.7
DNMT1-223ENST00000591239 RXRAP19793 462 aa10.67□□□□□ -0.7
DNMT1-223ENST00000591239 GNAQP50148 359 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms