RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 APOBRQ0VD83 1088 aa25.03■■□□□ 1.6
R3HDM4-206ENST00000590454 IKQ13123 557 aaPredicted RBP25.03■■□□□ 1.6
R3HDM4-206ENST00000590454 TOB2Q14106 344 aaPredicted RBP25.03■■□□□ 1.6
R3HDM4-206ENST00000590454 GRM4Q14833 912 aa25.03■■□□□ 1.6
R3HDM4-206ENST00000590454 CATIPQ7Z7H3 387 aa25.03■■□□□ 1.6
R3HDM4-206ENST00000590454 PRPF38AQ8NAV1 312 aaKnown RBP25.03■■□□□ 1.6
R3HDM4-206ENST00000590454 REPS2Q8NFH8 660 aa25.03■■□□□ 1.6
R3HDM4-206ENST00000590454 NUP133Q8WUM0 1156 aa25.03■■□□□ 1.6
R3HDM4-206ENST00000590454 BRF1Q92994 677 aa25.03■■□□□ 1.6
R3HDM4-206ENST00000590454 LARP6Q9BRS8 491 aaKnown RBP25.03■■□□□ 1.6
R3HDM4-206ENST00000590454 UBA5Q9GZZ9 404 aa25.03■■□□□ 1.6
R3HDM4-206ENST00000590454 SEMA6BQ9H3T3 888 aa25.03■■□□□ 1.6
R3HDM4-206ENST00000590454 ATP11BQ9Y2G3 1177 aa25.03■■□□□ 1.6
R3HDM4-206ENST00000590454 VWA5AO00534 786 aa25.02■■□□□ 1.6
R3HDM4-206ENST00000590454 PARP1P09874 1014 aaKnown RBP25.02■■□□□ 1.6
R3HDM4-206ENST00000590454 FGD1P98174 961 aa25.02■■□□□ 1.6
R3HDM4-206ENST00000590454 SHHQ15465 462 aa25.02■■□□□ 1.6
R3HDM4-206ENST00000590454 SLC35G1Q2M3R5 365 aa25.02■■□□□ 1.6
R3HDM4-206ENST00000590454 CCDC144CPQ8IYA2 1237 aa25.02■■□□□ 1.6
R3HDM4-206ENST00000590454 TMTC2Q8N394 836 aa25.02■■□□□ 1.6
R3HDM4-206ENST00000590454 AGXT2Q9BYV1 514 aa25.02■■□□□ 1.6
R3HDM4-206ENST00000590454 PRR12Q9ULL5 1215 aa25.02■■□□□ 1.6
R3HDM4-206ENST00000590454 UNC80Q8N2C7 3258 aa25.01■■□□□ 1.59
R3HDM4-206ENST00000590454 PLA2G6O60733 806 aa25.01■■□□□ 1.59
R3HDM4-206ENST00000590454 TMEM132BQ14DG7 1078 aa25.01■■□□□ 1.59
R3HDM4-206ENST00000590454 GJC2Q5T442 439 aaPredicted RBP25.01■■□□□ 1.59
R3HDM4-206ENST00000590454 APOA5Q6Q788 366 aa25.01■■□□□ 1.59
R3HDM4-206ENST00000590454 BTNL9Q6UXG8 535 aa25.01■■□□□ 1.59
R3HDM4-206ENST00000590454 SLC39A5Q6ZMH5 540 aa25.01■■□□□ 1.59
R3HDM4-206ENST00000590454 TRPV1Q8NER1 839 aa25.01■■□□□ 1.59
R3HDM4-206ENST00000590454 MAFAQ8NHW3 353 aaPredicted RBP25.01■■□□□ 1.59
R3HDM4-206ENST00000590454 CHURC1Q8WUH1 139 aa25.01■■□□□ 1.59
R3HDM4-206ENST00000590454 PDRG1Q9NUG6 133 aa25.01■■□□□ 1.59
R3HDM4-206ENST00000590454 SLC12A7Q9Y666 1083 aa25.01■■□□□ 1.59
R3HDM4-206ENST00000590454 KLF18A0A0U1RQI7 1052 aa25■■□□□ 1.59
R3HDM4-206ENST00000590454 PALM3A6NDB9 673 aaPredicted RBP25■■□□□ 1.59
R3HDM4-206ENST00000590454 DDAH1O94760 285 aa25■■□□□ 1.59
R3HDM4-206ENST00000590454 CYBAP13498 195 aa25■■□□□ 1.59
R3HDM4-206ENST00000590454 ASPRV1Q53RT3 343 aa25■■□□□ 1.59
R3HDM4-206ENST00000590454 SYDE2Q5VT97 1194 aa25■■□□□ 1.59
R3HDM4-206ENST00000590454 DPP9Q86TI2 863 aa25■■□□□ 1.59
R3HDM4-206ENST00000590454 FAM160B2Q86V87 743 aa25■■□□□ 1.59
R3HDM4-206ENST00000590454 FBXL16Q8N461 479 aa25■■□□□ 1.59
R3HDM4-206ENST00000590454 TBC1D32Q96NH3 1257 aa25■■□□□ 1.59
R3HDM4-206ENST00000590454 KBTBD13C9JR72 458 aa24.99■■□□□ 1.59
R3HDM4-206ENST00000590454 IGHA2P01877 340 aa24.99■■□□□ 1.59
R3HDM4-206ENST00000590454 FRMPD3Q5JV73 1810 aa24.99■■□□□ 1.59
R3HDM4-206ENST00000590454 GPATCH4Q5T3I0 446 aaKnown RBP24.99■■□□□ 1.59
R3HDM4-206ENST00000590454 MICU3Q86XE3 530 aa24.99■■□□□ 1.59
R3HDM4-206ENST00000590454 UPF2Q9HAU5 1272 aaKnown RBP24.99■■□□□ 1.59
R3HDM4-206ENST00000590454 PRDM5Q9NQX1 630 aaPredicted RBP24.99■■□□□ 1.59
R3HDM4-206ENST00000590454 KLRF2D3W0D1 207 aa24.98■■□□□ 1.59
R3HDM4-206ENST00000590454 STRNO43815 780 aa24.98■■□□□ 1.59
R3HDM4-206ENST00000590454 TAL1P17542 331 aaPredicted RBP24.98■■□□□ 1.59
R3HDM4-206ENST00000590454 SMAD3P84022 425 aaKnown RBP24.98■■□□□ 1.59
R3HDM4-206ENST00000590454 C9orf50Q5SZB4 431 aa24.98■■□□□ 1.59
R3HDM4-206ENST00000590454 OLFML2BQ68BL8 750 aa24.98■■□□□ 1.59
R3HDM4-206ENST00000590454 SLC38A10Q9HBR0 1119 aa24.98■■□□□ 1.59
R3HDM4-206ENST00000590454 RAVER2Q9HCJ3 691 aaKnown RBP24.98■■□□□ 1.59
R3HDM4-206ENST00000590454 ZNF214Q9UL59 606 aaPredicted RBP24.98■■□□□ 1.59
R3HDM4-206ENST00000590454 NEK4P51957 841 aa24.97■■□□□ 1.59
R3HDM4-206ENST00000590454 PLS1Q14651 629 aa24.97■■□□□ 1.59
R3HDM4-206ENST00000590454 BADQ92934 168 aa24.97■■□□□ 1.59
R3HDM4-206ENST00000590454 MOV10L1Q9BXT6 1211 aaKnown RBP24.97■■□□□ 1.59
R3HDM4-206ENST00000590454 SPATC1LQ9H0A9 340 aa24.97■■□□□ 1.59
R3HDM4-206ENST00000590454 NAP1L2Q9ULW6 460 aaPredicted RBP24.97■■□□□ 1.59
R3HDM4-206ENST00000590454 ZNF536O15090 1300 aa24.96■■□□□ 1.59
R3HDM4-206ENST00000590454 ZBTB43O43298 467 aa24.96■■□□□ 1.59
R3HDM4-206ENST00000590454 ZBED4O75132 1171 aa24.96■■□□□ 1.59
R3HDM4-206ENST00000590454 PLEKHA8P1O95397 391 aa24.96■■□□□ 1.59
R3HDM4-206ENST00000590454 AK2P54819 239 aa24.96■■□□□ 1.59
R3HDM4-206ENST00000590454 CCDC174Q6PII3 467 aa24.96■■□□□ 1.59
R3HDM4-206ENST00000590454 ADGRF4Q8IZF3 695 aa24.96■■□□□ 1.59
R3HDM4-206ENST00000590454 CPXCR1Q8N123 301 aa24.96■■□□□ 1.59
R3HDM4-206ENST00000590454 CMTR1Q8N1G2 835 aaKnown RBP24.96■■□□□ 1.59
R3HDM4-206ENST00000590454 MB21D1Q8N884 522 aa24.96■■□□□ 1.59
R3HDM4-206ENST00000590454 FANCBQ8NB91 859 aa24.96■■□□□ 1.59
R3HDM4-206ENST00000590454 MAP3K14Q99558 947 aa24.96■■□□□ 1.59
R3HDM4-206ENST00000590454 VAT1LQ9HCJ6 419 aa24.96■■□□□ 1.59
R3HDM4-206ENST00000590454 BAZ2BQ9UIF8 2168 aaKnown RBP24.95■■□□□ 1.59
R3HDM4-206ENST00000590454 GOLGA8BA8MQT2 603 aa24.95■■□□□ 1.58
R3HDM4-206ENST00000590454 SEPT4O43236 478 aa24.95■■□□□ 1.58
R3HDM4-206ENST00000590454 ADORA2AP29274 412 aa24.95■■□□□ 1.58
R3HDM4-206ENST00000590454 SNX17Q15036 470 aa24.95■■□□□ 1.58
R3HDM4-206ENST00000590454 TRIM60Q495X7 471 aa24.95■■□□□ 1.58
R3HDM4-206ENST00000590454 MYLIPQ8WY64 445 aa24.95■■□□□ 1.58
R3HDM4-206ENST00000590454 RANBP17Q9H2T7 1088 aaKnown RBP24.95■■□□□ 1.58
R3HDM4-206ENST00000590454 JMJD4Q9H9V9 463 aa24.95■■□□□ 1.58
R3HDM4-206ENST00000590454 FAM217BQ9NTX9 383 aaPredicted RBP24.95■■□□□ 1.58
R3HDM4-206ENST00000590454 RIPK3Q9Y572 518 aa24.95■■□□□ 1.58
R3HDM4-206ENST00000590454 SMCHD1A6NHR9 2005 aa24.95■■□□□ 1.58
R3HDM4-206ENST00000590454 CYTH3O43739 400 aa24.94■■□□□ 1.58
R3HDM4-206ENST00000590454 MYCNP04198 464 aaPredicted RBP24.94■■□□□ 1.58
R3HDM4-206ENST00000590454 EVCP57679 992 aa24.94■■□□□ 1.58
R3HDM4-206ENST00000590454 ANO1Q5XXA6 986 aa24.94■■□□□ 1.58
R3HDM4-206ENST00000590454 SYNE3Q6ZMZ3 975 aa24.94■■□□□ 1.58
R3HDM4-206ENST00000590454 SRBD1Q8N5C6 995 aaKnown RBP24.94■■□□□ 1.58
R3HDM4-206ENST00000590454 CTCFLQ8NI51 663 aaPredicted RBP24.94■■□□□ 1.58
R3HDM4-206ENST00000590454 AGBL1Q96MI9 1066 aa24.94■■□□□ 1.58
R3HDM4-206ENST00000590454 ALDH8A1Q9H2A2 487 aaPredicted RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms