RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 UBAC1Q9BSL1 405 aa16.84■□□□□ 0.29
CIRBP-228ENST00000590347 NHEJ1Q9H9Q4 299 aaPredicted RBP16.84■□□□□ 0.29
CIRBP-228ENST00000590347 RGPD5Q99666 1765 aa16.84■□□□□ 0.29
CIRBP-228ENST00000590347 B4DLN1 442 aa16.83■□□□□ 0.29
CIRBP-228ENST00000590347 RPS6KA3P51812 740 aa16.83■□□□□ 0.29
CIRBP-228ENST00000590347 ITGB3BPQ13352 177 aaPredicted RBP16.83■□□□□ 0.29
CIRBP-228ENST00000590347 LINS1Q8NG48 757 aa16.83■□□□□ 0.29
CIRBP-228ENST00000590347 KRT12Q99456 494 aa16.83■□□□□ 0.29
CIRBP-228ENST00000590347 DDX21Q9NR30 783 aaKnown RBP eCLIP16.83■□□□□ 0.29
CIRBP-228ENST00000590347 SNX12Q9UMY4 172 aa16.83■□□□□ 0.29
CIRBP-228ENST00000590347 UBN2Q6ZU65 1347 aa16.83■□□□□ 0.28
CIRBP-228ENST00000590347 ZNF263O14978 683 aa16.83■□□□□ 0.28
CIRBP-228ENST00000590347 FOXP2O15409 715 aa16.83■□□□□ 0.28
CIRBP-228ENST00000590347 RANBP1P43487 201 aa16.83■□□□□ 0.28
CIRBP-228ENST00000590347 ENOX2Q16206 610 aaKnown RBP16.83■□□□□ 0.28
CIRBP-228ENST00000590347 NBPF9Q3BBW0 867 aa16.83■□□□□ 0.28
CIRBP-228ENST00000590347 ZMYM1Q5SVZ6 1142 aa16.83■□□□□ 0.28
CIRBP-228ENST00000590347 ALS2CLQ60I27 953 aa16.83■□□□□ 0.28
CIRBP-228ENST00000590347 TYW1BQ6NUM6 668 aa16.83■□□□□ 0.28
CIRBP-228ENST00000590347 MB21D2Q8IYB1 491 aaPredicted RBP16.83■□□□□ 0.28
CIRBP-228ENST00000590347 IQCKQ8N0W5 287 aa16.83■□□□□ 0.28
CIRBP-228ENST00000590347 NELFBQ8WX92 580 aa16.83■□□□□ 0.28
CIRBP-228ENST00000590347 OSBPL9Q96SU4 736 aa16.83■□□□□ 0.28
CIRBP-228ENST00000590347 KDM6AO15550 1401 aaPredicted RBP16.83■□□□□ 0.28
CIRBP-228ENST00000590347 GOLGA8AA7E2F4 631 aa16.83■□□□□ 0.28
CIRBP-228ENST00000590347 IFIT1P09914 478 aaKnown RBP16.83■□□□□ 0.28
CIRBP-228ENST00000590347 RAB27AP51159 221 aa16.83■□□□□ 0.28
CIRBP-228ENST00000590347 RWDD2BP57060 319 aa16.83■□□□□ 0.28
CIRBP-228ENST00000590347 KIF5AQ12840 1032 aa16.83■□□□□ 0.28
CIRBP-228ENST00000590347 MIS18BP1Q6P0N0 1132 aa16.83■□□□□ 0.28
CIRBP-228ENST00000590347 SPATS2Q86XZ4 545 aaKnown RBP16.83■□□□□ 0.28
CIRBP-228ENST00000590347 ZNF513Q8N8E2 541 aaPredicted RBP16.83■□□□□ 0.28
CIRBP-228ENST00000590347 SYMPKQ92797 1274 aaKnown RBP16.83■□□□□ 0.28
CIRBP-228ENST00000590347 CCDC51Q96ER9 411 aa16.83■□□□□ 0.28
CIRBP-228ENST00000590347 LBHD1Q9BQE6 289 aaPredicted RBP16.83■□□□□ 0.28
CIRBP-228ENST00000590347 C15orf41Q9Y2V0 281 aa16.83■□□□□ 0.28
CIRBP-228ENST00000590347 PXDNLA1KZ92 1463 aa16.82■□□□□ 0.28
CIRBP-228ENST00000590347 PTPREP23469 700 aa16.82■□□□□ 0.28
CIRBP-228ENST00000590347 KCNJ2P63252 427 aa16.82■□□□□ 0.28
CIRBP-228ENST00000590347 TCP11X2Q5H9J9 407 aa16.82■□□□□ 0.28
CIRBP-228ENST00000590347 RAPGEF5Q92565 580 aa16.82■□□□□ 0.28
CIRBP-228ENST00000590347 PUS7LQ9H0K6 701 aaKnown RBP16.82■□□□□ 0.28
CIRBP-228ENST00000590347 NOVA2Q9UNW9 492 aaKnown RBP16.82■□□□□ 0.28
CIRBP-228ENST00000590347 LAMA4Q16363 1823 aa16.82■□□□□ 0.28
CIRBP-228ENST00000590347 RRP12Q5JTH9 1297 aaKnown RBP16.82■□□□□ 0.28
CIRBP-228ENST00000590347 PDHA1P08559 390 aa16.81■□□□□ 0.28
CIRBP-228ENST00000590347 EPB41P11171 864 aaKnown RBP16.81■□□□□ 0.28
CIRBP-228ENST00000590347 PMS1P54277 932 aaKnown RBP16.81■□□□□ 0.28
CIRBP-228ENST00000590347 EMBQ6PCB8 327 aa16.81■□□□□ 0.28
CIRBP-228ENST00000590347 CCDC63Q8NA47 563 aa16.81■□□□□ 0.28
CIRBP-228ENST00000590347 NCOA7Q8NI08 942 aa16.81■□□□□ 0.28
CIRBP-228ENST00000590347 CASKIN2Q8WXE0 1202 aa16.81■□□□□ 0.28
CIRBP-228ENST00000590347 SALL4Q9UJQ4 1053 aa16.81■□□□□ 0.28
CIRBP-228ENST00000590347 ZNF213O14771 459 aa16.81■□□□□ 0.28
CIRBP-228ENST00000590347 HOXB7P09629 217 aa16.81■□□□□ 0.28
CIRBP-228ENST00000590347 ACTR5Q9H9F9 607 aaPredicted RBP16.81■□□□□ 0.28
CIRBP-228ENST00000590347 GNAT1P11488 350 aa16.81■□□□□ 0.28
CIRBP-228ENST00000590347 PECAM1P16284 738 aaPredicted RBP16.81■□□□□ 0.28
CIRBP-228ENST00000590347 NT5DC1Q5TFE4 455 aa16.81■□□□□ 0.28
CIRBP-228ENST00000590347 RCSD1Q6JBY9 416 aa16.81■□□□□ 0.28
CIRBP-228ENST00000590347 ZBTB3Q9H5J0 574 aa16.81■□□□□ 0.28
CIRBP-228ENST00000590347 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.81■□□□□ 0.28
CIRBP-228ENST00000590347 NCAPD2Q15021 1401 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 GOLGA6L10A6NI86 522 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 RNF113AO15541 343 aaKnown RBP16.8■□□□□ 0.28
CIRBP-228ENST00000590347 MGRN1O60291 552 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 EVI5O60447 810 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 DDX58O95786 925 aaKnown RBP16.8■□□□□ 0.28
CIRBP-228ENST00000590347 LINGO3P0C6S8 592 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 PLCB4Q15147 1175 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 ZNF174Q15697 407 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 EARS2Q5JPH6 523 aaKnown RBP16.8■□□□□ 0.28
CIRBP-228ENST00000590347 IQCEQ6IPM2 695 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 APOA5Q6Q788 366 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 ERICH1Q86X53 443 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 DCAF5Q96JK2 942 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 RPGRIP1Q96KN7 1286 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 CD2APQ9Y5K6 639 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 SH3TC1Q8TE82 1336 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 FTCDO95954 541 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 ARID4AP29374 1257 aaPredicted RBP16.8■□□□□ 0.28
CIRBP-228ENST00000590347 LMBR1LQ6UX01 489 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 ANKRD13DQ6ZTN6 518 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 KSR1Q8IVT5 923 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 MMGT1Q8N4V1 131 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 SLC17A8Q8NDX2 589 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 KAT6BQ8WYB5 2073 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 SLIT3O75094 1523 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 TNS3Q68CZ2 1445 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 STRCP1A6NGW2 1772 aa16.8■□□□□ 0.28
CIRBP-228ENST00000590347 FAM237AA0A1B0GTK4 181 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 PRDM1O75626 825 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 SMNDC1O75940 238 aaKnown RBP eCLIP16.79■□□□□ 0.281e-6■■□□□ 14
CIRBP-228ENST00000590347 ABL2P42684 1182 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 NEXNQ0ZGT2 675 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 TBC1D10CQ8IV04 446 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 CCDC170Q8IYT3 715 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 ZCRB1Q8TBF4 217 aaKnown RBP16.79■□□□□ 0.28
CIRBP-228ENST00000590347 UBLCP1Q8WVY7 318 aaPredicted RBP16.79■□□□□ 0.28
CIRBP-228ENST00000590347 NUCKS1Q9H1E3 243 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms