RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 PDE4DIPQ5VU43 2346 aa24.72■■□□□ 1.55
ATG4D-212ENST00000590096 PFASO15067 1338 aa24.72■■□□□ 1.55
ATG4D-212ENST00000590096 BAZ2BQ9UIF8 2168 aaKnown RBP24.72■■□□□ 1.55
ATG4D-212ENST00000590096 INHAP05111 366 aa24.72■■□□□ 1.55
ATG4D-212ENST00000590096 PGK2P07205 417 aa24.72■■□□□ 1.55
ATG4D-212ENST00000590096 SMARCA1P28370 1054 aa24.72■■□□□ 1.55
ATG4D-212ENST00000590096 MUM1L1Q5H9M0 696 aa24.72■■□□□ 1.55
ATG4D-212ENST00000590096 NPLOC4Q8TAT6 608 aa24.72■■□□□ 1.55
ATG4D-212ENST00000590096 MTMR8Q96EF0 704 aa24.72■■□□□ 1.55
ATG4D-212ENST00000590096 IL17RAQ96F46 866 aa24.72■■□□□ 1.55
ATG4D-212ENST00000590096 PIGSQ96S52 555 aa24.72■■□□□ 1.55
ATG4D-212ENST00000590096 SMCHD1A6NHR9 2005 aa24.71■■□□□ 1.55
ATG4D-212ENST00000590096 ABCB11O95342 1321 aa24.71■■□□□ 1.55
ATG4D-212ENST00000590096 CYTH3O43739 400 aa24.71■■□□□ 1.55
ATG4D-212ENST00000590096 PLEKHA8P1O95397 391 aa24.71■■□□□ 1.55
ATG4D-212ENST00000590096 METAP2P50579 478 aaKnown RBP eCLIP24.71■■□□□ 1.55
ATG4D-212ENST00000590096 CCL14Q16627 93 aa24.71■■□□□ 1.55
ATG4D-212ENST00000590096 SLC35G1Q2M3R5 365 aa24.71■■□□□ 1.55
ATG4D-212ENST00000590096 TMTC3Q6ZXV5 915 aa24.71■■□□□ 1.55
ATG4D-212ENST00000590096 RRP36Q96EU6 259 aaKnown RBP24.71■■□□□ 1.55
ATG4D-212ENST00000590096 AMNQ9BXJ7 453 aa24.71■■□□□ 1.55
ATG4D-212ENST00000590096 A1CFQ9NQ94 594 aaKnown RBP24.71■■□□□ 1.55
ATG4D-212ENST00000590096 PLXNA1Q9UIW2 1896 aa24.7■■□□□ 1.55
ATG4D-212ENST00000590096 TNRC18O15417 2968 aaPredicted RBP24.7■■□□□ 1.55
ATG4D-212ENST00000590096 TRAF1Q13077 416 aa24.7■■□□□ 1.54
ATG4D-212ENST00000590096 TOB2Q14106 344 aaPredicted RBP24.7■■□□□ 1.54
ATG4D-212ENST00000590096 PPP2R5BQ15173 497 aa24.7■■□□□ 1.54
ATG4D-212ENST00000590096 MFSD14CQ5VZR4 134 aa24.7■■□□□ 1.54
ATG4D-212ENST00000590096 NSMFQ6X4W1 530 aa24.7■■□□□ 1.54
ATG4D-212ENST00000590096 SRBD1Q8N5C6 995 aaKnown RBP24.7■■□□□ 1.54
ATG4D-212ENST00000590096 PIBF1Q8WXW3 757 aa24.7■■□□□ 1.54
ATG4D-212ENST00000590096 C22orf23Q9BZE7 217 aa24.7■■□□□ 1.54
ATG4D-212ENST00000590096 SEC63Q9UGP8 760 aaKnown RBP24.7■■□□□ 1.54
ATG4D-212ENST00000590096 DIS3Q9Y2L1 958 aaKnown RBP24.7■■□□□ 1.54
ATG4D-212ENST00000590096 PNMA6FA0A0J9YX94 578 aa24.69■■□□□ 1.54
ATG4D-212ENST00000590096 CCDC196A0A1B0GTZ2 297 aa24.69■■□□□ 1.54
ATG4D-212ENST00000590096 MYCP01106 439 aaPredicted RBP24.69■■□□□ 1.54
ATG4D-212ENST00000590096 ZNF792Q3KQV3 632 aa24.69■■□□□ 1.54
ATG4D-212ENST00000590096 OLFML2BQ68BL8 750 aa24.69■■□□□ 1.54
ATG4D-212ENST00000590096 CMTR1Q8N1G2 835 aaKnown RBP24.69■■□□□ 1.54
ATG4D-212ENST00000590096 MRPL11Q9Y3B7 192 aaKnown RBP24.69■■□□□ 1.54
ATG4D-212ENST00000590096 DNAJC25-GNG10A0A024R161 153 aa24.68■■□□□ 1.54
ATG4D-212ENST00000590096 POTEB2H3BUK9 544 aa24.68■■□□□ 1.54
ATG4D-212ENST00000590096 NFIBO00712 420 aa24.68■■□□□ 1.54
ATG4D-212ENST00000590096 CCDC82Q8N4S0 544 aa24.68■■□□□ 1.54
ATG4D-212ENST00000590096 MAML3Q96JK9 1138 aa24.68■■□□□ 1.54
ATG4D-212ENST00000590096 TMEM106CQ9BVX2 250 aa24.68■■□□□ 1.54
ATG4D-212ENST00000590096 FLRT1Q9NZU1 646 aa24.68■■□□□ 1.54
ATG4D-212ENST00000590096 PTPDC1A2A3K4 754 aa24.67■■□□□ 1.54
ATG4D-212ENST00000590096 EVCP57679 992 aa24.67■■□□□ 1.54
ATG4D-212ENST00000590096 CLEC4DQ8WXI8 215 aa24.67■■□□□ 1.54
ATG4D-212ENST00000590096 CYP39A1Q9NYL5 469 aa24.67■■□□□ 1.54
ATG4D-212ENST00000590096 PCDHA1Q9Y5I3 950 aa24.67■■□□□ 1.54
ATG4D-212ENST00000590096 PRKAR2AP13861 404 aaKnown RBP24.66■■□□□ 1.54
ATG4D-212ENST00000590096 TRIM32Q13049 653 aa24.66■■□□□ 1.54
ATG4D-212ENST00000590096 ANKRD1Q15327 319 aa24.66■■□□□ 1.54
ATG4D-212ENST00000590096 MTFR1Q15390 333 aa24.66■■□□□ 1.54
ATG4D-212ENST00000590096 RNF207Q6ZRF8 634 aa24.66■■□□□ 1.54
ATG4D-212ENST00000590096 MCF2L2Q86YR7 1114 aa24.66■■□□□ 1.54
ATG4D-212ENST00000590096 ALDH8A1Q9H2A2 487 aaPredicted RBP24.66■■□□□ 1.54
ATG4D-212ENST00000590096 NID2Q14112 1375 aa24.66■■□□□ 1.54
ATG4D-212ENST00000590096 PPP1R11O60927 126 aaPredicted RBP24.65■■□□□ 1.54
ATG4D-212ENST00000590096 CCL5P13501 91 aa24.65■■□□□ 1.54
ATG4D-212ENST00000590096 PDIA3P30101 505 aaKnown RBP24.65■■□□□ 1.54
ATG4D-212ENST00000590096 CDC27P30260 824 aa24.65■■□□□ 1.54
ATG4D-212ENST00000590096 NEK4P51957 841 aa24.65■■□□□ 1.54
ATG4D-212ENST00000590096 BAATQ14032 418 aaPredicted RBP24.65■■□□□ 1.54
ATG4D-212ENST00000590096 ZNF274Q96GC6 653 aaPredicted RBP24.65■■□□□ 1.54
ATG4D-212ENST00000590096 RNF208Q9H0X6 261 aa24.65■■□□□ 1.54
ATG4D-212ENST00000590096 RBBP6Q7Z6E9 1792 aaKnown RBP24.65■■□□□ 1.54
ATG4D-212ENST00000590096 CNTNAP5Q8WYK1 1306 aa24.64■■□□□ 1.54
ATG4D-212ENST00000590096 CYP2C19P33261 490 aa24.64■■□□□ 1.54
ATG4D-212ENST00000590096 ADD1P35611 737 aaKnown RBP24.64■■□□□ 1.54
ATG4D-212ENST00000590096 RBM25P49756 843 aaKnown RBP24.64■■□□□ 1.54
ATG4D-212ENST00000590096 CACNB2Q08289 660 aaPredicted RBP24.64■■□□□ 1.54
ATG4D-212ENST00000590096 ZNF467Q7Z7K2 595 aaPredicted RBP24.64■■□□□ 1.54
ATG4D-212ENST00000590096 MSL3Q8N5Y2 521 aaKnown RBP24.64■■□□□ 1.54
ATG4D-212ENST00000590096 FAM133AQ8N9E0 248 aa24.64■■□□□ 1.54
ATG4D-212ENST00000590096 RGS22Q8NE09 1264 aa24.64■■□□□ 1.54
ATG4D-212ENST00000590096 LARP6Q9BRS8 491 aaKnown RBP24.64■■□□□ 1.54
ATG4D-212ENST00000590096 TINF2Q9BSI4 451 aa24.64■■□□□ 1.54
ATG4D-212ENST00000590096 MAF1Q9H063 256 aa24.64■■□□□ 1.54
ATG4D-212ENST00000590096 UNC93B1Q9H1C4 597 aa24.64■■□□□ 1.54
ATG4D-212ENST00000590096 HMX1Q9NP08 348 aaPredicted RBP24.64■■□□□ 1.54
ATG4D-212ENST00000590096 FAM217BQ9NTX9 383 aaPredicted RBP24.64■■□□□ 1.54
ATG4D-212ENST00000590096 RPTORQ8N122 1335 aa24.63■■□□□ 1.53
ATG4D-212ENST00000590096 CENPFP49454 3210 aa24.63■■□□□ 1.53
ATG4D-212ENST00000590096 CALML3P27482 149 aa24.63■■□□□ 1.53
ATG4D-212ENST00000590096 RPS6P62753 249 aaKnown RBP24.63■■□□□ 1.53
ATG4D-212ENST00000590096 CCT2P78371 535 aaKnown RBP24.63■■□□□ 1.53
ATG4D-212ENST00000590096 CNTN2Q02246 1040 aa24.63■■□□□ 1.53
ATG4D-212ENST00000590096 MAP3K21Q5TCX8 1036 aa24.63■■□□□ 1.53
ATG4D-212ENST00000590096 AK2P54819 239 aa24.62■■□□□ 1.53
ATG4D-212ENST00000590096 SLC30A10Q6XR72 485 aa24.62■■□□□ 1.53
ATG4D-212ENST00000590096 ADD3Q9UEY8 706 aaKnown RBP24.62■■□□□ 1.53
ATG4D-212ENST00000590096 hCG_1642624A0A1W2PR95 340 aa24.61■■□□□ 1.53
ATG4D-212ENST00000590096 IGHA2P01877 340 aa24.61■■□□□ 1.53
ATG4D-212ENST00000590096 BACH2Q9BYV9 841 aa24.61■■□□□ 1.53
ATG4D-212ENST00000590096 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.61■■□□□ 1.53
ATG4D-212ENST00000590096 SYNGAP1Q96PV0 1343 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms