RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 PDE4BQ07343 736 aa18.12■□□□□ 0.49
ACTN4-211ENST00000589528 FSCN1Q16658 493 aaKnown RBP18.12■□□□□ 0.49
ACTN4-211ENST00000589528 FAM160B2Q86V87 743 aa18.12■□□□□ 0.49
ACTN4-211ENST00000589528 MICALL1Q8N3F8 863 aa18.12■□□□□ 0.49
ACTN4-211ENST00000589528 UHRF1Q96T88 793 aaPredicted RBP18.12■□□□□ 0.49
ACTN4-211ENST00000589528 SEZ6LQ9BYH1 1024 aa18.12■□□□□ 0.49
ACTN4-211ENST00000589528 NACAP1Q9BZK3 213 aa18.12■□□□□ 0.49
ACTN4-211ENST00000589528 CXXC1Q9P0U4 656 aaPredicted RBP18.12■□□□□ 0.49
ACTN4-211ENST00000589528 CTAGE5O15320 804 aa18.11■□□□□ 0.49
ACTN4-211ENST00000589528 RNF113AO15541 343 aaKnown RBP18.11■□□□□ 0.49
ACTN4-211ENST00000589528 DYNC1LI2O43237 492 aaPredicted RBP18.11■□□□□ 0.49
ACTN4-211ENST00000589528 ALAS1P13196 640 aa18.11■□□□□ 0.49
ACTN4-211ENST00000589528 ADGRE1Q14246 886 aa18.11■□□□□ 0.49
ACTN4-211ENST00000589528 LRRFIP1Q32MZ4 808 aaKnown RBP18.11■□□□□ 0.49
ACTN4-211ENST00000589528 TKFCQ3LXA3 575 aa18.11■□□□□ 0.49
ACTN4-211ENST00000589528 PPP2R2DQ66LE6 453 aa18.11■□□□□ 0.49
ACTN4-211ENST00000589528 RPUSD2Q8IZ73 545 aaKnown RBP18.11■□□□□ 0.49
ACTN4-211ENST00000589528 FAM133AQ8N9E0 248 aa18.11■□□□□ 0.49
ACTN4-211ENST00000589528 CHMP4CQ96CF2 233 aa18.11■□□□□ 0.49
ACTN4-211ENST00000589528 AGBL1Q96MI9 1066 aa18.11■□□□□ 0.49
ACTN4-211ENST00000589528 TRERF1Q96PN7 1200 aa18.11■□□□□ 0.49
ACTN4-211ENST00000589528 KATNBL1Q9H079 304 aa18.11■□□□□ 0.49
ACTN4-211ENST00000589528 EPB41L4AQ9HCS5 686 aaPredicted RBP18.11■□□□□ 0.49
ACTN4-211ENST00000589528 A1CFQ9NQ94 594 aaKnown RBP18.11■□□□□ 0.49
ACTN4-211ENST00000589528 SLC4A7Q9Y6M7 1214 aa18.11■□□□□ 0.49
ACTN4-211ENST00000589528 LRRC37A2A6NM11 1700 aa18.1■□□□□ 0.49
ACTN4-211ENST00000589528 UMODL1Q5DID0 1318 aa18.1■□□□□ 0.49
ACTN4-211ENST00000589528 NKX3-2P78367 333 aa18.1■□□□□ 0.49
ACTN4-211ENST00000589528 EEPD1Q7L9B9 569 aa18.1■□□□□ 0.49
ACTN4-211ENST00000589528 GNEQ9Y223 722 aaKnown RBP18.1■□□□□ 0.49
ACTN4-211ENST00000589528 PLIN4Q96Q06 1357 aa18.09■□□□□ 0.49
ACTN4-211ENST00000589528 ASTN1O14525 1302 aa18.09■□□□□ 0.49
ACTN4-211ENST00000589528 PATL2C9JE40 543 aaKnown RBP18.09■□□□□ 0.49
ACTN4-211ENST00000589528 B4GALT4O60513 344 aa18.09■□□□□ 0.49
ACTN4-211ENST00000589528 PPP4R3BQ5MIZ7 849 aa18.09■□□□□ 0.49
ACTN4-211ENST00000589528 FBXO16Q8IX29 292 aaPredicted RBP18.09■□□□□ 0.49
ACTN4-211ENST00000589528 SLC43A3Q8NBI5 491 aa18.09■□□□□ 0.49
ACTN4-211ENST00000589528 NEDD1Q8NHV4 660 aa18.09■□□□□ 0.49
ACTN4-211ENST00000589528 STAG1Q8WVM7 1258 aa18.09■□□□□ 0.49
ACTN4-211ENST00000589528 TRPV6Q9H1D0 765 aa18.09■□□□□ 0.49
ACTN4-211ENST00000589528 YBX2Q9Y2T7 364 aaKnown RBP18.09■□□□□ 0.49
ACTN4-211ENST00000589528 CHD9Q3L8U1 2897 aa18.09■□□□□ 0.49
ACTN4-211ENST00000589528 CHD7Q9P2D1 2997 aa18.08■□□□□ 0.49
ACTN4-211ENST00000589528 SOWAHBA6NEL2 793 aa18.08■□□□□ 0.48
ACTN4-211ENST00000589528 SMPD1P17405 629 aa18.08■□□□□ 0.48
ACTN4-211ENST00000589528 MCCP23508 829 aa18.08■□□□□ 0.48
ACTN4-211ENST00000589528 RABGGTBP53611 331 aa18.08■□□□□ 0.48
ACTN4-211ENST00000589528 PSMC6P62333 389 aa18.08■□□□□ 0.48
ACTN4-211ENST00000589528 TFAP4Q01664 338 aa18.08■□□□□ 0.48
ACTN4-211ENST00000589528 SKIV2LQ15477 1246 aaKnown RBP18.08■□□□□ 0.48
ACTN4-211ENST00000589528 IQSEC1Q6DN90 963 aa18.08■□□□□ 0.48
ACTN4-211ENST00000589528 IFNL3Q8IZI9 196 aa18.08■□□□□ 0.48
ACTN4-211ENST00000589528 NOC4LQ9BVI4 516 aaKnown RBP18.08■□□□□ 0.48
ACTN4-211ENST00000589528 NAPBQ9H115 298 aa18.08■□□□□ 0.48
ACTN4-211ENST00000589528 M0R2C6 588 aa18.07■□□□□ 0.48
ACTN4-211ENST00000589528 TSHZ3Q63HK5 1081 aa18.07■□□□□ 0.48
ACTN4-211ENST00000589528 NSMFQ6X4W1 530 aa18.07■□□□□ 0.48
ACTN4-211ENST00000589528 KIAA1211Q6ZU35 1233 aa18.07■□□□□ 0.48
ACTN4-211ENST00000589528 SCLYQ96I15 445 aa18.07■□□□□ 0.48
ACTN4-211ENST00000589528 GMCL1Q96IK5 515 aa18.07■□□□□ 0.48
ACTN4-211ENST00000589528 STX8Q9UNK0 236 aa18.07■□□□□ 0.48
ACTN4-211ENST00000589528 MTMR7Q9Y216 660 aa18.07■□□□□ 0.48
ACTN4-211ENST00000589528 Q9Y3F1 56 aa18.07■□□□□ 0.48
ACTN4-211ENST00000589528 PCDHA11Q9Y5I1 949 aa18.07■□□□□ 0.48
ACTN4-211ENST00000589528 ZNF536O15090 1300 aa18.06■□□□□ 0.48
ACTN4-211ENST00000589528 TSPY2A6NKD2 308 aa18.06■□□□□ 0.48
ACTN4-211ENST00000589528 SUPT20HL2P0C7V6 817 aa18.06■□□□□ 0.48
ACTN4-211ENST00000589528 ATP2A2P16615 1042 aaKnown RBP18.06■□□□□ 0.48
ACTN4-211ENST00000589528 AAK1Q2M2I8 961 aa18.06■□□□□ 0.48
ACTN4-211ENST00000589528 KCTD1Q719H9 257 aa18.06■□□□□ 0.48
ACTN4-211ENST00000589528 WNT8AQ9H1J5 351 aa18.06■□□□□ 0.48
ACTN4-211ENST00000589528 VTA1Q9NP79 307 aa18.06■□□□□ 0.48
ACTN4-211ENST00000589528 PDGFCQ9NRA1 345 aa18.06■□□□□ 0.48
ACTN4-211ENST00000589528 CYP39A1Q9NYL5 469 aa18.06■□□□□ 0.48
ACTN4-211ENST00000589528 CCPG1Q9ULG6 757 aa18.06■□□□□ 0.48
ACTN4-211ENST00000589528 SCN5AQ14524 2016 aa18.06■□□□□ 0.48
ACTN4-211ENST00000589528 LCTP09848 1927 aa18.06■□□□□ 0.48
ACTN4-211ENST00000589528 PFKMP08237 780 aa18.05■□□□□ 0.48
ACTN4-211ENST00000589528 PTGS1P23219 599 aa18.05■□□□□ 0.48
ACTN4-211ENST00000589528 SNAP25P60880 206 aa18.05■□□□□ 0.48
ACTN4-211ENST00000589528 PPARAQ07869 468 aa18.05■□□□□ 0.48
ACTN4-211ENST00000589528 MUM1L1Q5H9M0 696 aa18.05■□□□□ 0.48
ACTN4-211ENST00000589528 ALDH8A1Q9H2A2 487 aaPredicted RBP18.05■□□□□ 0.48
ACTN4-211ENST00000589528 GPHNQ9NQX3 736 aaPredicted RBP18.05■□□□□ 0.48
ACTN4-211ENST00000589528 RAPGEFL1Q9UHV5 662 aa18.05■□□□□ 0.48
ACTN4-211ENST00000589528 DDX49Q9Y6V7 483 aaKnown RBP18.05■□□□□ 0.48
ACTN4-211ENST00000589528 GRIN2DO15399 1336 aa18.04■□□□□ 0.48
ACTN4-211ENST00000589528 GTPBP6O43824 516 aaPredicted RBP18.04■□□□□ 0.48
ACTN4-211ENST00000589528 ACTN1P12814 892 aa18.04■□□□□ 0.48
ACTN4-211ENST00000589528 MYOGP15173 224 aa18.04■□□□□ 0.48
ACTN4-211ENST00000589528 CCDC96Q2M329 555 aa18.04■□□□□ 0.48
ACTN4-211ENST00000589528 TMEM67Q5HYA8 995 aa18.04■□□□□ 0.48
ACTN4-211ENST00000589528 RCSD1Q6JBY9 416 aa18.04■□□□□ 0.48
ACTN4-211ENST00000589528 TAPT1Q6NXT6 567 aa18.04■□□□□ 0.48
ACTN4-211ENST00000589528 DEFB128Q7Z7B8 93 aa18.04■□□□□ 0.48
ACTN4-211ENST00000589528 POLR3EQ9NVU0 708 aa18.04■□□□□ 0.48
ACTN4-211ENST00000589528 PRRC2BQ5JSZ5 2229 aaKnown RBP18.04■□□□□ 0.48
ACTN4-211ENST00000589528 PLA2G6O60733 806 aa18.03■□□□□ 0.48
ACTN4-211ENST00000589528 MYL3P08590 195 aa18.03■□□□□ 0.48
ACTN4-211ENST00000589528 BRDTQ58F21 947 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms