RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 SMARCC2Q8TAQ2 1214 aa24.6■■□□□ 1.53
R3HDM4-204ENST00000589428 JMJD4Q9H9V9 463 aa24.6■■□□□ 1.53
R3HDM4-204ENST00000589428 HOMER2Q9NSB8 354 aa24.6■■□□□ 1.53
R3HDM4-204ENST00000589428 RBM28Q9NW13 759 aaKnown RBP24.6■■□□□ 1.53
R3HDM4-204ENST00000589428 FBXO40Q9UH90 709 aa24.6■■□□□ 1.53
R3HDM4-204ENST00000589428 PTCH2Q9Y6C5 1203 aa24.6■■□□□ 1.53
R3HDM4-204ENST00000589428 CCDC196A0A1B0GTZ2 297 aa24.59■■□□□ 1.53
R3HDM4-204ENST00000589428 SLC15A5A6NIM6 579 aa24.59■■□□□ 1.53
R3HDM4-204ENST00000589428 PPFIA3O75145 1194 aa24.59■■□□□ 1.53
R3HDM4-204ENST00000589428 FCER1AP12319 257 aa24.59■■□□□ 1.53
R3HDM4-204ENST00000589428 ALAS1P13196 640 aa24.59■■□□□ 1.53
R3HDM4-204ENST00000589428 GRB14Q14449 540 aa24.59■■□□□ 1.53
R3HDM4-204ENST00000589428 TKFCQ3LXA3 575 aa24.59■■□□□ 1.53
R3HDM4-204ENST00000589428 CHST13Q8NET6 341 aa24.59■■□□□ 1.53
R3HDM4-204ENST00000589428 PLEKHA8P1O95397 391 aa24.58■■□□□ 1.53
R3HDM4-204ENST00000589428 GJB2P29033 226 aa24.58■■□□□ 1.53
R3HDM4-204ENST00000589428 RGS2P41220 211 aa24.58■■□□□ 1.53
R3HDM4-204ENST00000589428 KCTD2Q14681 263 aa24.58■■□□□ 1.53
R3HDM4-204ENST00000589428 MORN1Q5T089 497 aa24.58■■□□□ 1.53
R3HDM4-204ENST00000589428 TMTC3Q6ZXV5 915 aa24.58■■□□□ 1.53
R3HDM4-204ENST00000589428 MMP19Q99542 508 aa24.58■■□□□ 1.53
R3HDM4-204ENST00000589428 RNF146Q9NTX7 359 aa24.58■■□□□ 1.53
R3HDM4-204ENST00000589428 GJD2Q9UKL4 321 aa24.58■■□□□ 1.53
R3HDM4-204ENST00000589428 DOCK3Q8IZD9 2030 aa24.58■■□□□ 1.53
R3HDM4-204ENST00000589428 HOMER1Q86YM7 354 aa24.58■■□□□ 1.52
R3HDM4-204ENST00000589428 ABRAQ8N0Z2 381 aa24.58■■□□□ 1.52
R3HDM4-204ENST00000589428 CMTR1Q8N1G2 835 aaKnown RBP24.58■■□□□ 1.52
R3HDM4-204ENST00000589428 SPZ1Q9BXG8 430 aa24.58■■□□□ 1.52
R3HDM4-204ENST00000589428 RIOX1Q9H6W3 641 aa24.58■■□□□ 1.52
R3HDM4-204ENST00000589428 ACAD9Q9H845 621 aa24.58■■□□□ 1.52
R3HDM4-204ENST00000589428 ZNF236Q9UL36 1845 aa24.57■■□□□ 1.52
R3HDM4-204ENST00000589428 IFNAR1P17181 557 aa24.57■■□□□ 1.52
R3HDM4-204ENST00000589428 MAP2K5Q13163 448 aa24.57■■□□□ 1.52
R3HDM4-204ENST00000589428 IRF5Q13568 498 aa24.57■■□□□ 1.52
R3HDM4-204ENST00000589428 QRICH1Q2TAL8 776 aa24.57■■□□□ 1.52
R3HDM4-204ENST00000589428 TNS4Q8IZW8 715 aa24.57■■□□□ 1.52
R3HDM4-204ENST00000589428 DDX11Q96FC9 970 aa24.57■■□□□ 1.52
R3HDM4-204ENST00000589428 TRERF1Q96PN7 1200 aa24.57■■□□□ 1.52
R3HDM4-204ENST00000589428 CDKL5O76039 1030 aa24.56■■□□□ 1.52
R3HDM4-204ENST00000589428 SMARCA1P28370 1054 aa24.56■■□□□ 1.52
R3HDM4-204ENST00000589428 ADORA2AP29274 412 aa24.56■■□□□ 1.52
R3HDM4-204ENST00000589428 FUT2Q10981 343 aa24.56■■□□□ 1.52
R3HDM4-204ENST00000589428 CPLX2Q6PUV4 134 aaKnown RBP24.56■■□□□ 1.52
R3HDM4-204ENST00000589428 NBPF11Q86T75 865 aa24.56■■□□□ 1.52
R3HDM4-204ENST00000589428 PHKBQ93100 1093 aa24.56■■□□□ 1.52
R3HDM4-204ENST00000589428 APBA2Q99767 749 aa24.56■■□□□ 1.52
R3HDM4-204ENST00000589428 ZBTB5O15062 677 aa24.55■■□□□ 1.52
R3HDM4-204ENST00000589428 CYTH3O43739 400 aa24.55■■□□□ 1.52
R3HDM4-204ENST00000589428 CYP2B6P20813 491 aa24.55■■□□□ 1.52
R3HDM4-204ENST00000589428 USH1GQ495M9 461 aa24.55■■□□□ 1.52
R3HDM4-204ENST00000589428 MTMR8Q96EF0 704 aa24.55■■□□□ 1.52
R3HDM4-204ENST00000589428 FDPSP14324 419 aaKnown RBP24.55■■□□□ 1.52
R3HDM4-204ENST00000589428 TAL1P17542 331 aaPredicted RBP24.55■■□□□ 1.52
R3HDM4-204ENST00000589428 HMGN5P82970 282 aaKnown RBP24.55■■□□□ 1.52
R3HDM4-204ENST00000589428 SLC35G1Q2M3R5 365 aa24.55■■□□□ 1.52
R3HDM4-204ENST00000589428 SLC9C1Q4G0N8 1177 aa24.55■■□□□ 1.52
R3HDM4-204ENST00000589428 DPP9Q86TI2 863 aa24.55■■□□□ 1.52
R3HDM4-204ENST00000589428 FBXO11Q86XK2 927 aa24.55■■□□□ 1.52
R3HDM4-204ENST00000589428 ANKRD35Q8N283 1001 aa24.55■■□□□ 1.52
R3HDM4-204ENST00000589428 CCDC82Q8N4S0 544 aa24.55■■□□□ 1.52
R3HDM4-204ENST00000589428 SRBD1Q8N5C6 995 aaKnown RBP24.55■■□□□ 1.52
R3HDM4-204ENST00000589428 SLAIN1Q8ND83 568 aa24.55■■□□□ 1.52
R3HDM4-204ENST00000589428 USP6NLQ92738 828 aa24.55■■□□□ 1.52
R3HDM4-204ENST00000589428 PIGSQ96S52 555 aa24.55■■□□□ 1.52
R3HDM4-204ENST00000589428 SLC5A4Q9NY91 659 aa24.55■■□□□ 1.52
R3HDM4-204ENST00000589428 MYH6P13533 1939 aa24.54■■□□□ 1.52
R3HDM4-204ENST00000589428 BAZ2BQ9UIF8 2168 aaKnown RBP24.54■■□□□ 1.52
R3HDM4-204ENST00000589428 ADCY3O60266 1144 aa24.54■■□□□ 1.52
R3HDM4-204ENST00000589428 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.54■■□□□ 1.526e-6■■□□□ 13.4
R3HDM4-204ENST00000589428 RRP36Q96EU6 259 aaKnown RBP24.54■■□□□ 1.52
R3HDM4-204ENST00000589428 AMNQ9BXJ7 453 aa24.54■■□□□ 1.52
R3HDM4-204ENST00000589428 SEC63Q9UGP8 760 aaKnown RBP24.54■■□□□ 1.52
R3HDM4-204ENST00000589428 GRK4P32298 578 aa24.53■■□□□ 1.52
R3HDM4-204ENST00000589428 TRAF1Q13077 416 aa24.53■■□□□ 1.52
R3HDM4-204ENST00000589428 PIBF1Q8WXW3 757 aa24.53■■□□□ 1.52
R3HDM4-204ENST00000589428 CNTNAP5Q8WYK1 1306 aa24.53■■□□□ 1.52
R3HDM4-204ENST00000589428 HTTP42858 3142 aa24.53■■□□□ 1.52
R3HDM4-204ENST00000589428 XRCC5P13010 732 aaKnown RBP24.52■■□□□ 1.52
R3HDM4-204ENST00000589428 PXYLP1Q8TE99 480 aa24.52■■□□□ 1.52
R3HDM4-204ENST00000589428 SLC26A6Q9BXS9 759 aa24.52■■□□□ 1.52
R3HDM4-204ENST00000589428 ORC3Q9UBD5 711 aaPredicted RBP24.52■■□□□ 1.52
R3HDM4-204ENST00000589428 ABCB11O95342 1321 aa24.52■■□□□ 1.52
R3HDM4-204ENST00000589428 STK36Q9NRP7 1315 aa24.52■■□□□ 1.52
R3HDM4-204ENST00000589428 PNMA6FA0A0J9YX94 578 aa24.52■■□□□ 1.52
R3HDM4-204ENST00000589428 HOXC6P09630 235 aa24.52■■□□□ 1.52
R3HDM4-204ENST00000589428 MUM1L1Q5H9M0 696 aa24.52■■□□□ 1.52
R3HDM4-204ENST00000589428 TRMT44Q8IYL2 757 aaKnown RBP24.52■■□□□ 1.52
R3HDM4-204ENST00000589428 PFASO15067 1338 aa24.52■■□□□ 1.52
R3HDM4-204ENST00000589428 ELNP15502 786 aa24.51■■□□□ 1.51
R3HDM4-204ENST00000589428 PGK2P07205 417 aa24.5■■□□□ 1.51
R3HDM4-204ENST00000589428 SSRP1Q08945 709 aaKnown RBP24.5■■□□□ 1.51
R3HDM4-204ENST00000589428 PKP1Q13835 747 aa24.5■■□□□ 1.51
R3HDM4-204ENST00000589428 NSMFQ6X4W1 530 aa24.5■■□□□ 1.51
R3HDM4-204ENST00000589428 TRIM22Q8IYM9 498 aa24.5■■□□□ 1.51
R3HDM4-204ENST00000589428 FAM184AQ8NB25 1140 aa24.5■■□□□ 1.51
R3HDM4-204ENST00000589428 SH3TC2Q8TF17 1288 aa24.5■■□□□ 1.51
R3HDM4-204ENST00000589428 RNF26Q9BY78 433 aaPredicted RBP24.5■■□□□ 1.51
R3HDM4-204ENST00000589428 A1CFQ9NQ94 594 aaKnown RBP24.5■■□□□ 1.51
R3HDM4-204ENST00000589428 BIN2Q9UBW5 565 aaPredicted RBP24.5■■□□□ 1.51
R3HDM4-204ENST00000589428 CIZ1Q9ULV3 898 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms