RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 NAALADL2Q58DX5 795 aa17.21■□□□□ 0.35
MBD1-217ENST00000588937 HSP90AA4PQ58FG1 418 aa17.21■□□□□ 0.35
MBD1-217ENST00000588937 FCHSD1Q86WN1 690 aa17.21■□□□□ 0.35
MBD1-217ENST00000588937 ANKRD20A12PQ8NF67 263 aa17.21■□□□□ 0.35
MBD1-217ENST00000588937 COA7Q96BR5 231 aa17.21■□□□□ 0.35
MBD1-217ENST00000588937 RAB34Q9BZG1 259 aa17.21■□□□□ 0.35
MBD1-217ENST00000588937 KBTBD4Q9NVX7 518 aa17.21■□□□□ 0.35
MBD1-217ENST00000588937 CTNND2Q9UQB3 1225 aa17.21■□□□□ 0.35
MBD1-217ENST00000588937 USP27XA6NNY8 438 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 RIOK3O14730 519 aaKnown RBP17.2■□□□□ 0.34
MBD1-217ENST00000588937 ZBTB5O15062 677 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 STX17P56962 302 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 AMPD3Q01432 767 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 TCP10Q12799 353 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 STIM1Q13586 685 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 AOC3Q16853 763 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 TMEM266Q2M3C6 531 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 CLEC10AQ8IUN9 316 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 ZFPM1Q8IX07 1006 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 CUL5Q93034 780 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 MTMR8Q96EF0 704 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 TRMT1Q9NXH9 659 aaKnown RBP17.2■□□□□ 0.34
MBD1-217ENST00000588937 ZNF219Q9P2Y4 722 aaPredicted RBP17.2■□□□□ 0.34
MBD1-217ENST00000588937 FAM198AQ9UFP1 575 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 SIPA1L1O43166 1804 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 PP2D1A8MPX8 630 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 ENTPD3O75355 529 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 DPEP1P16444 411 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 CALCRLQ16602 461 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 E4F1Q66K89 784 aaPredicted RBP17.2■□□□□ 0.34
MBD1-217ENST00000588937 TATDN1Q6P1N9 297 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 TMEM179Q6ZVK1 233 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 SMYD4Q8IYR2 804 aaPredicted RBP17.2■□□□□ 0.34
MBD1-217ENST00000588937 CALML4Q96GE6 196 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 NAP1L4Q99733 375 aaKnown RBP17.2■□□□□ 0.34
MBD1-217ENST00000588937 VPS33BQ9H267 617 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 CD2APQ9Y5K6 639 aa17.2■□□□□ 0.34
MBD1-217ENST00000588937 COL2A1P02458 1487 aaPredicted RBP17.19■□□□□ 0.34
MBD1-217ENST00000588937 DDTLA6NHG4 134 aaPredicted RBP17.19■□□□□ 0.34
MBD1-217ENST00000588937 ARHGAP6O43182 974 aa17.19■□□□□ 0.34
MBD1-217ENST00000588937 MTERF4Q7Z6M4 381 aaKnown RBP17.19■□□□□ 0.34
MBD1-217ENST00000588937 RTKN2Q8IZC4 609 aa17.19■□□□□ 0.34
MBD1-217ENST00000588937 IGSF22Q8N9C0 903 aa17.19■□□□□ 0.34
MBD1-217ENST00000588937 NELFBQ8WX92 580 aa17.19■□□□□ 0.34
MBD1-217ENST00000588937 MAP7D2Q96T17 732 aa17.19■□□□□ 0.34
MBD1-217ENST00000588937 PSMD1Q99460 953 aa17.19■□□□□ 0.34
MBD1-217ENST00000588937 DNAJC18Q9H819 358 aa17.19■□□□□ 0.34
MBD1-217ENST00000588937 TMEM260Q9NX78 707 aa17.19■□□□□ 0.34
MBD1-217ENST00000588937 ATF5Q9Y2D1 282 aaPredicted RBP17.19■□□□□ 0.34
MBD1-217ENST00000588937 ATRNL1Q5VV63 1379 aa17.18■□□□□ 0.34
MBD1-217ENST00000588937 PSME4Q14997 1843 aa17.18■□□□□ 0.34
MBD1-217ENST00000588937 PPIP5K2O43314 1243 aa17.18■□□□□ 0.34
MBD1-217ENST00000588937 PPP1R2P41236 205 aa17.18■□□□□ 0.34
MBD1-217ENST00000588937 TECP42680 631 aa17.18■□□□□ 0.34
MBD1-217ENST00000588937 FXR2P51116 673 aaKnown RBP eCLIP17.18■□□□□ 0.34
MBD1-217ENST00000588937 TTBK2Q6IQ55 1244 aa17.18■□□□□ 0.34
MBD1-217ENST00000588937 PPP1R13BQ96KQ4 1090 aa17.18■□□□□ 0.34
MBD1-217ENST00000588937 MTMR9Q96QG7 549 aa17.18■□□□□ 0.34
MBD1-217ENST00000588937 ADD3Q9UEY8 706 aaKnown RBP17.18■□□□□ 0.34
MBD1-217ENST00000588937 H7C1D1 291 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 RRP9O43818 475 aaKnown RBP17.17■□□□□ 0.34
MBD1-217ENST00000588937 STX10O60499 249 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 RHOBTB3O94955 611 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 EEF2P13639 858 aaKnown RBP17.17■□□□□ 0.34
MBD1-217ENST00000588937 PLCG1P19174 1290 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 SLC1A4P43007 532 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 PTGER2P43116 358 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 CLK2P49760 499 aaKnown RBP17.17■□□□□ 0.34
MBD1-217ENST00000588937 CACNB3P54284 484 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 PDIA5Q14554 519 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 KMT5BQ4FZB7 885 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 CCDC93Q567U6 631 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 SLFN13Q68D06 897 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 PPP4R3AQ6IN85 833 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 KCTD1Q719H9 257 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 APTXQ7Z2E3 356 aaKnown RBP17.17■□□□□ 0.34
MBD1-217ENST00000588937 POTEDQ86YR6 584 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 KIF18AQ8NI77 898 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 PIM2Q9P1W9 311 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 LIMA1Q9UHB6 759 aaKnown RBP17.17■□□□□ 0.34
MBD1-217ENST00000588937 LRRC10BA6NIK2 292 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 USP17L10C9JJH3 530 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 ZSCAN12O43309 604 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 GCFC2P16383 781 aaKnown RBP17.17■□□□□ 0.34
MBD1-217ENST00000588937 ADSSL1Q8N142 457 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 ZNF592Q92610 1267 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 BAG1Q99933 345 aaPredicted RBP17.17■□□□□ 0.34
MBD1-217ENST00000588937 C7orf25Q9BPX7 421 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 PCDHAC2Q9Y5I4 1007 aa17.17■□□□□ 0.34
MBD1-217ENST00000588937 TPM1P09493 284 aa17.16■□□□□ 0.34
MBD1-217ENST00000588937 HOXA7P31268 230 aaPredicted RBP17.16■□□□□ 0.34
MBD1-217ENST00000588937 TXKP42681 527 aa17.16■□□□□ 0.34
MBD1-217ENST00000588937 PRCPP42785 496 aa17.16■□□□□ 0.34
MBD1-217ENST00000588937 TNNI2P48788 182 aa17.16■□□□□ 0.34
MBD1-217ENST00000588937 ICA1Q05084 483 aa17.16■□□□□ 0.34
MBD1-217ENST00000588937 ABCB5Q2M3G0 1257 aa17.16■□□□□ 0.34
MBD1-217ENST00000588937 MCTP2Q6DN12 878 aa17.16■□□□□ 0.34
MBD1-217ENST00000588937 SH3BP5LQ7L8J4 393 aa17.16■□□□□ 0.34
MBD1-217ENST00000588937 PPFIBP1Q86W92 1011 aa17.16■□□□□ 0.34
MBD1-217ENST00000588937 PSTPIP2Q9H939 334 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms