RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ACAD9Q9H845 621 aa21.96■■□□□ 1.11
CLPTM1-209ENST00000588855 PNMA2Q9UL42 364 aa21.96■■□□□ 1.11
CLPTM1-209ENST00000588855 IVNS1ABPQ9Y6Y0 642 aa21.96■■□□□ 1.11
CLPTM1-209ENST00000588855 PLXNA1Q9UIW2 1896 aa21.96■■□□□ 1.11
CLPTM1-209ENST00000588855 PTPREP23469 700 aa21.96■■□□□ 1.11
CLPTM1-209ENST00000588855 ARHGEF6Q15052 776 aa21.96■■□□□ 1.11
CLPTM1-209ENST00000588855 FBXO40Q9UH90 709 aa21.96■■□□□ 1.11
CLPTM1-209ENST00000588855 GABRQQ9UN88 632 aa21.96■■□□□ 1.11
CLPTM1-209ENST00000588855 V9GY48 417 aaPredicted RBP21.96■■□□□ 1.11
CLPTM1-209ENST00000588855 ABCB11O95342 1321 aa21.95■■□□□ 1.1
CLPTM1-209ENST00000588855 NFIBO00712 420 aa21.95■■□□□ 1.1
CLPTM1-209ENST00000588855 DTNBO60941 627 aa21.95■■□□□ 1.1
CLPTM1-209ENST00000588855 PRKCZQ05513 592 aa21.95■■□□□ 1.1
CLPTM1-209ENST00000588855 GRB14Q14449 540 aa21.95■■□□□ 1.1
CLPTM1-209ENST00000588855 CLEC4DQ8WXI8 215 aa21.95■■□□□ 1.1
CLPTM1-209ENST00000588855 ZSCAN31Q96LW9 406 aaPredicted RBP21.95■■□□□ 1.1
CLPTM1-209ENST00000588855 MMP19Q99542 508 aa21.95■■□□□ 1.1
CLPTM1-209ENST00000588855 SLC26A6Q9BXS9 759 aa21.95■■□□□ 1.1
CLPTM1-209ENST00000588855 PCDHA1Q9Y5I3 950 aa21.95■■□□□ 1.1
CLPTM1-209ENST00000588855 LCTP09848 1927 aa21.95■■□□□ 1.1
CLPTM1-209ENST00000588855 GNRH1P01148 92 aa21.94■■□□□ 1.1
CLPTM1-209ENST00000588855 FCER1AP12319 257 aa21.94■■□□□ 1.1
CLPTM1-209ENST00000588855 MORN1Q5T089 497 aa21.94■■□□□ 1.1
CLPTM1-209ENST00000588855 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.94■■□□□ 1.1
CLPTM1-209ENST00000588855 CTU1Q7Z7A3 348 aaKnown RBP21.94■■□□□ 1.1
CLPTM1-209ENST00000588855 SH2B1Q9NRF2 756 aaPredicted RBP21.94■■□□□ 1.1
CLPTM1-209ENST00000588855 SRRDQ9UH36 339 aa21.94■■□□□ 1.1
CLPTM1-209ENST00000588855 GJD2Q9UKL4 321 aa21.94■■□□□ 1.1
CLPTM1-209ENST00000588855 SLC15A5A6NIM6 579 aa21.93■■□□□ 1.1
CLPTM1-209ENST00000588855 STRNO43815 780 aa21.93■■□□□ 1.1
CLPTM1-209ENST00000588855 CTDNEP1O95476 244 aa21.93■■□□□ 1.1
CLPTM1-209ENST00000588855 ADORA2AP29274 412 aa21.93■■□□□ 1.1
CLPTM1-209ENST00000588855 KCTD2Q14681 263 aa21.93■■□□□ 1.1
CLPTM1-209ENST00000588855 CPLX2Q6PUV4 134 aaKnown RBP21.93■■□□□ 1.1
CLPTM1-209ENST00000588855 CCDC83Q8IWF9 413 aa21.93■■□□□ 1.1
CLPTM1-209ENST00000588855 SOCS4Q8WXH5 440 aa21.93■■□□□ 1.1
CLPTM1-209ENST00000588855 GPKOWQ92917 476 aaPredicted RBP eCLIP21.93■■□□□ 1.1
CLPTM1-209ENST00000588855 RNF26Q9BY78 433 aaPredicted RBP21.93■■□□□ 1.1
CLPTM1-209ENST00000588855 A1CFQ9NQ94 594 aaKnown RBP21.93■■□□□ 1.1
CLPTM1-209ENST00000588855 CENPFP49454 3210 aa21.93■■□□□ 1.1
CLPTM1-209ENST00000588855 PRPF3O43395 683 aaKnown RBP21.92■■□□□ 1.1
CLPTM1-209ENST00000588855 HOXD10P28358 340 aa21.92■■□□□ 1.1
CLPTM1-209ENST00000588855 MCM2P49736 904 aa21.92■■□□□ 1.1
CLPTM1-209ENST00000588855 FLT3LGP49771 235 aa21.92■■□□□ 1.1
CLPTM1-209ENST00000588855 ABRAQ8N0Z2 381 aa21.92■■□□□ 1.1
CLPTM1-209ENST00000588855 NUDT12Q9BQG2 462 aa21.92■■□□□ 1.1
CLPTM1-209ENST00000588855 MRPL11Q9Y3B7 192 aaKnown RBP21.92■■□□□ 1.1
CLPTM1-209ENST00000588855 OPLAHO14841 1288 aa21.91■■□□□ 1.1
CLPTM1-209ENST00000588855 SSRP1Q08945 709 aaKnown RBP21.91■■□□□ 1.1
CLPTM1-209ENST00000588855 MAP2K5Q13163 448 aa21.91■■□□□ 1.1
CLPTM1-209ENST00000588855 PKN1Q16512 942 aa21.91■■□□□ 1.1
CLPTM1-209ENST00000588855 WWC2Q6AWC2 1192 aa21.91■■□□□ 1.1
CLPTM1-209ENST00000588855 NSMFQ6X4W1 530 aa21.91■■□□□ 1.1
CLPTM1-209ENST00000588855 HEATR3Q7Z4Q2 680 aa21.91■■□□□ 1.1
CLPTM1-209ENST00000588855 ANKRD35Q8N283 1001 aa21.91■■□□□ 1.1
CLPTM1-209ENST00000588855 USP6NLQ92738 828 aa21.91■■□□□ 1.1
CLPTM1-209ENST00000588855 CDKL5O76039 1030 aa21.9■■□□□ 1.1
CLPTM1-209ENST00000588855 PGK2P07205 417 aa21.9■■□□□ 1.1
CLPTM1-209ENST00000588855 AKAP17AQ02040 695 aaKnown RBP21.9■■□□□ 1.1
CLPTM1-209ENST00000588855 TRAF1Q13077 416 aa21.9■■□□□ 1.1
CLPTM1-209ENST00000588855 PFKFB3Q16875 520 aaPredicted RBP21.9■■□□□ 1.1
CLPTM1-209ENST00000588855 TRIM22Q8IYM9 498 aa21.9■■□□□ 1.1
CLPTM1-209ENST00000588855 TMX3Q96JJ7 454 aa21.9■■□□□ 1.1
CLPTM1-209ENST00000588855 RBM27Q9P2N5 1060 aaKnown RBP21.9■■□□□ 1.1
CLPTM1-209ENST00000588855 COBLO75128 1261 aa21.9■■□□□ 1.1
CLPTM1-209ENST00000588855 SCG2P13521 617 aa21.9■■□□□ 1.1
CLPTM1-209ENST00000588855 CYP2B6P20813 491 aa21.9■■□□□ 1.1
CLPTM1-209ENST00000588855 SLC30A10Q6XR72 485 aa21.9■■□□□ 1.1
CLPTM1-209ENST00000588855 NSUN7Q8NE18 718 aaKnown RBP21.9■■□□□ 1.1
CLPTM1-209ENST00000588855 TBC1D5Q92609 795 aa21.9■■□□□ 1.1
CLPTM1-209ENST00000588855 DDX11Q96FC9 970 aa21.9■■□□□ 1.1
CLPTM1-209ENST00000588855 CYP39A1Q9NYL5 469 aa21.9■■□□□ 1.1
CLPTM1-209ENST00000588855 PFASO15067 1338 aa21.89■■□□□ 1.09
CLPTM1-209ENST00000588855 RGS2P41220 211 aa21.89■■□□□ 1.09
CLPTM1-209ENST00000588855 PRMT2P55345 433 aa21.89■■□□□ 1.09
CLPTM1-209ENST00000588855 TYW1BQ6NUM6 668 aa21.89■■□□□ 1.09
CLPTM1-209ENST00000588855 PTPN22Q9Y2R2 807 aa21.89■■□□□ 1.09
CLPTM1-209ENST00000588855 PTCH2Q9Y6C5 1203 aa21.89■■□□□ 1.09
CLPTM1-209ENST00000588855 STK36Q9NRP7 1315 aa21.88■■□□□ 1.09
CLPTM1-209ENST00000588855 DNAJC25-GNG10A0A024R161 153 aa21.88■■□□□ 1.09
CLPTM1-209ENST00000588855 PTPDC1A2A3K4 754 aa21.88■■□□□ 1.09
CLPTM1-209ENST00000588855 STXBP3O00186 592 aa21.88■■□□□ 1.09
CLPTM1-209ENST00000588855 JAK2O60674 1132 aa21.88■■□□□ 1.09
CLPTM1-209ENST00000588855 DEXIO95424 95 aa21.88■■□□□ 1.09
CLPTM1-209ENST00000588855 BAATQ14032 418 aaPredicted RBP21.88■■□□□ 1.09
CLPTM1-209ENST00000588855 RNF207Q6ZRF8 634 aa21.88■■□□□ 1.09
CLPTM1-209ENST00000588855 DPP9Q86TI2 863 aa21.88■■□□□ 1.09
CLPTM1-209ENST00000588855 NPLOC4Q8TAT6 608 aa21.88■■□□□ 1.09
CLPTM1-209ENST00000588855 RAET1EQ8TD07 263 aa21.88■■□□□ 1.09
CLPTM1-209ENST00000588855 APBA2Q99767 749 aa21.88■■□□□ 1.09
CLPTM1-209ENST00000588855 BARHL2Q9NY43 387 aa21.88■■□□□ 1.09
CLPTM1-209ENST00000588855 hCG_1984214I3L0E3 225 aa21.87■■□□□ 1.09
CLPTM1-209ENST00000588855 HOXC6P09630 235 aa21.87■■□□□ 1.09
CLPTM1-209ENST00000588855 NAPAP54920 295 aa21.87■■□□□ 1.09
CLPTM1-209ENST00000588855 RPS6P62753 249 aaKnown RBP21.87■■□□□ 1.09
CLPTM1-209ENST00000588855 IRF5Q13568 498 aa21.87■■□□□ 1.09
CLPTM1-209ENST00000588855 MCF2L2Q86YR7 1114 aa21.87■■□□□ 1.09
CLPTM1-209ENST00000588855 ZNF713Q8N859 430 aaPredicted RBP21.87■■□□□ 1.09
CLPTM1-209ENST00000588855 AIFM3Q96NN9 605 aa21.87■■□□□ 1.09
CLPTM1-209ENST00000588855 CFBP00751 764 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms