RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 APOBRQ0VD83 1088 aa23.49■■□□□ 1.35
DDX39A-207ENST00000588542 MAP3K21Q5TCX8 1036 aa23.49■■□□□ 1.35
DDX39A-207ENST00000588542 OLFML2BQ68BL8 750 aa23.49■■□□□ 1.35
DDX39A-207ENST00000588542 SRBD1Q8N5C6 995 aaKnown RBP23.49■■□□□ 1.35
DDX39A-207ENST00000588542 FANCBQ8NB91 859 aa23.49■■□□□ 1.35
DDX39A-207ENST00000588542 BRF1Q92994 677 aa23.49■■□□□ 1.35
DDX39A-207ENST00000588542 DDX11Q96FC9 970 aa23.49■■□□□ 1.35
DDX39A-207ENST00000588542 MAML3Q96JK9 1138 aa23.49■■□□□ 1.35
DDX39A-207ENST00000588542 PNMA2Q9UL42 364 aa23.49■■□□□ 1.35
DDX39A-207ENST00000588542 DIS3Q9Y2L1 958 aaKnown RBP23.49■■□□□ 1.35
DDX39A-207ENST00000588542 NFIBO00712 420 aa23.48■■□□□ 1.35
DDX39A-207ENST00000588542 ZBTB43O43298 467 aa23.48■■□□□ 1.35
DDX39A-207ENST00000588542 PPP1R11O60927 126 aaPredicted RBP23.48■■□□□ 1.35
DDX39A-207ENST00000588542 CAPN15O75808 1086 aa23.48■■□□□ 1.35
DDX39A-207ENST00000588542 CCL5P13501 91 aa23.48■■□□□ 1.35
DDX39A-207ENST00000588542 SMARCA1P28370 1054 aa23.48■■□□□ 1.35
DDX39A-207ENST00000588542 FGD1P98174 961 aa23.48■■□□□ 1.35
DDX39A-207ENST00000588542 USH1GQ495M9 461 aa23.48■■□□□ 1.35
DDX39A-207ENST00000588542 SYNE3Q6ZMZ3 975 aa23.48■■□□□ 1.35
DDX39A-207ENST00000588542 FBXO11Q86XK2 927 aa23.48■■□□□ 1.35
DDX39A-207ENST00000588542 PIGSQ96S52 555 aa23.48■■□□□ 1.35
DDX39A-207ENST00000588542 SPZ1Q9BXG8 430 aa23.48■■□□□ 1.35
DDX39A-207ENST00000588542 UNC93B1Q9H1C4 597 aa23.48■■□□□ 1.35
DDX39A-207ENST00000588542 SLC5A4Q9NY91 659 aa23.48■■□□□ 1.35
DDX39A-207ENST00000588542 ZBTB5O15062 677 aa23.47■■□□□ 1.35
DDX39A-207ENST00000588542 GNAQP50148 359 aa23.47■■□□□ 1.35
DDX39A-207ENST00000588542 CACNB2Q08289 660 aaPredicted RBP23.47■■□□□ 1.35
DDX39A-207ENST00000588542 TOB2Q14106 344 aaPredicted RBP23.47■■□□□ 1.35
DDX39A-207ENST00000588542 CMTR1Q8N1G2 835 aaKnown RBP23.47■■□□□ 1.35
DDX39A-207ENST00000588542 FGD4Q96M96 766 aa23.47■■□□□ 1.35
DDX39A-207ENST00000588542 LZTS2Q9BRK4 669 aa23.47■■□□□ 1.35
DDX39A-207ENST00000588542 CYP39A1Q9NYL5 469 aa23.47■■□□□ 1.35
DDX39A-207ENST00000588542 FRMPD3Q5JV73 1810 aa23.47■■□□□ 1.35
DDX39A-207ENST00000588542 PFASO15067 1338 aa23.46■■□□□ 1.35
DDX39A-207ENST00000588542 CYP2C19P33261 490 aa23.46■■□□□ 1.35
DDX39A-207ENST00000588542 RCAN1P53805 252 aa23.46■■□□□ 1.35
DDX39A-207ENST00000588542 SOX10P56693 466 aa23.46■■□□□ 1.35
DDX39A-207ENST00000588542 CNTN2Q02246 1040 aa23.46■■□□□ 1.35
DDX39A-207ENST00000588542 TMTC3Q6ZXV5 915 aa23.46■■□□□ 1.35
DDX39A-207ENST00000588542 HOMER1Q86YM7 354 aa23.46■■□□□ 1.35
DDX39A-207ENST00000588542 FAM133AQ8N9E0 248 aa23.46■■□□□ 1.35
DDX39A-207ENST00000588542 FAM217BQ9NTX9 383 aaPredicted RBP23.46■■□□□ 1.35
DDX39A-207ENST00000588542 NID2Q14112 1375 aa23.45■■□□□ 1.34
DDX39A-207ENST00000588542 ABCB11O95342 1321 aa23.45■■□□□ 1.34
DDX39A-207ENST00000588542 POTEFA5A3E0 1075 aa23.45■■□□□ 1.34
DDX39A-207ENST00000588542 PRKAR2AP13861 404 aaKnown RBP23.45■■□□□ 1.34
DDX39A-207ENST00000588542 EVCP57679 992 aa23.45■■□□□ 1.34
DDX39A-207ENST00000588542 IFFO2Q5TF58 517 aa23.45■■□□□ 1.34
DDX39A-207ENST00000588542 MFSD14CQ5VZR4 134 aa23.45■■□□□ 1.34
DDX39A-207ENST00000588542 NSMFQ6X4W1 530 aa23.45■■□□□ 1.34
DDX39A-207ENST00000588542 AMNQ9BXJ7 453 aa23.45■■□□□ 1.34
DDX39A-207ENST00000588542 RPTORQ8N122 1335 aa23.44■■□□□ 1.34
DDX39A-207ENST00000588542 PNMA6FA0A0J9YX94 578 aa23.44■■□□□ 1.34
DDX39A-207ENST00000588542 GOLGA8AA7E2F4 631 aa23.44■■□□□ 1.34
DDX39A-207ENST00000588542 GOLGA8BA8MQT2 603 aa23.44■■□□□ 1.34
DDX39A-207ENST00000588542 POTEB2H3BUK9 544 aa23.44■■□□□ 1.34
DDX39A-207ENST00000588542 CDC27P30260 824 aa23.44■■□□□ 1.34
DDX39A-207ENST00000588542 RTN1Q16799 776 aa23.44■■□□□ 1.34
DDX39A-207ENST00000588542 RNF208Q9H0X6 261 aa23.44■■□□□ 1.34
DDX39A-207ENST00000588542 PAK6Q9NQU5 681 aaPredicted RBP23.44■■□□□ 1.34
DDX39A-207ENST00000588542 PDRG1Q9NUG6 133 aa23.44■■□□□ 1.34
DDX39A-207ENST00000588542 RBM28Q9NW13 759 aaKnown RBP23.44■■□□□ 1.34
DDX39A-207ENST00000588542 ASTN1O14525 1302 aa23.43■■□□□ 1.34
DDX39A-207ENST00000588542 LRRC37A2A6NM11 1700 aa23.43■■□□□ 1.34
DDX39A-207ENST00000588542 SOWAHBA6NEL2 793 aa23.43■■□□□ 1.34
DDX39A-207ENST00000588542 FUT2Q10981 343 aa23.43■■□□□ 1.34
DDX39A-207ENST00000588542 BAATQ14032 418 aaPredicted RBP23.43■■□□□ 1.34
DDX39A-207ENST00000588542 SLC30A10Q6XR72 485 aa23.43■■□□□ 1.34
DDX39A-207ENST00000588542 ZNF467Q7Z7K2 595 aaPredicted RBP23.43■■□□□ 1.34
DDX39A-207ENST00000588542 TRPV1Q8NER1 839 aa23.43■■□□□ 1.34
DDX39A-207ENST00000588542 PIBF1Q8WXW3 757 aa23.43■■□□□ 1.34
DDX39A-207ENST00000588542 TINF2Q9BSI4 451 aa23.43■■□□□ 1.34
DDX39A-207ENST00000588542 TMEM106CQ9BVX2 250 aa23.43■■□□□ 1.34
DDX39A-207ENST00000588542 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.43■■□□□ 1.347e-7■■■□□ 16.6
DDX39A-207ENST00000588542 HMX1Q9NP08 348 aaPredicted RBP23.43■■□□□ 1.34
DDX39A-207ENST00000588542 NAP1L2Q9ULW6 460 aaPredicted RBP23.43■■□□□ 1.34
DDX39A-207ENST00000588542 CNTNAP5Q8WYK1 1306 aa23.42■■□□□ 1.34
DDX39A-207ENST00000588542 OPLAHO14841 1288 aa23.42■■□□□ 1.34
DDX39A-207ENST00000588542 CCND3P30281 292 aaPredicted RBP23.42■■□□□ 1.34
DDX39A-207ENST00000588542 MAMDC4Q6UXC1 1216 aa23.42■■□□□ 1.34
DDX39A-207ENST00000588542 CCDC82Q8N4S0 544 aa23.42■■□□□ 1.34
DDX39A-207ENST00000588542 RGS22Q8NE09 1264 aa23.42■■□□□ 1.34
DDX39A-207ENST00000588542 TBC1D5Q92609 795 aa23.42■■□□□ 1.34
DDX39A-207ENST00000588542 PURBQ96QR8 312 aaKnown RBP23.42■■□□□ 1.34
DDX39A-207ENST00000588542 ALDH8A1Q9H2A2 487 aaPredicted RBP23.42■■□□□ 1.34
DDX39A-207ENST00000588542 MRPL11Q9Y3B7 192 aaKnown RBP23.42■■□□□ 1.34
DDX39A-207ENST00000588542 PCDHA1Q9Y5I3 950 aa23.42■■□□□ 1.34
DDX39A-207ENST00000588542 GJB1P08034 283 aa23.41■■□□□ 1.34
DDX39A-207ENST00000588542 CYBAP13498 195 aa23.41■■□□□ 1.34
DDX39A-207ENST00000588542 PDIA3P30101 505 aaKnown RBP23.41■■□□□ 1.34
DDX39A-207ENST00000588542 ADD1P35611 737 aaKnown RBP23.41■■□□□ 1.34
DDX39A-207ENST00000588542 METAP2P50579 478 aaKnown RBP eCLIP23.41■■□□□ 1.34
DDX39A-207ENST00000588542 RNF207Q6ZRF8 634 aa23.41■■□□□ 1.34
DDX39A-207ENST00000588542 MSL3Q8N5Y2 521 aaKnown RBP23.41■■□□□ 1.34
DDX39A-207ENST00000588542 RRP36Q96EU6 259 aaKnown RBP23.41■■□□□ 1.34
DDX39A-207ENST00000588542 LARP6Q9BRS8 491 aaKnown RBP23.41■■□□□ 1.34
DDX39A-207ENST00000588542 PTPDC1A2A3K4 754 aa23.4■■□□□ 1.34
DDX39A-207ENST00000588542 RPS6P62753 249 aaKnown RBP23.4■■□□□ 1.34
DDX39A-207ENST00000588542 PPP2R5BQ15173 497 aa23.4■■□□□ 1.34
DDX39A-207ENST00000588542 PRAMEF19Q5SWL8 479 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms