RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 GLIS2Q9BZE0 524 aaPredicted RBP18.77■□□□□ 0.6
NFIX-210ENST00000588228 GGA3Q9NZ52 723 aa18.77■□□□□ 0.6
NFIX-210ENST00000588228 YBX3P16989 372 aaKnown RBP eCLIP18.76■□□□□ 0.59
NFIX-210ENST00000588228 NLRP12P59046 1061 aa18.76■□□□□ 0.59
NFIX-210ENST00000588228 MDM2Q00987 491 aaPredicted RBP18.76■□□□□ 0.59
NFIX-210ENST00000588228 PNOCQ13519 176 aa18.76■□□□□ 0.59
NFIX-210ENST00000588228 ZYXQ15942 572 aaKnown RBP18.76■□□□□ 0.59
NFIX-210ENST00000588228 C11orf57Q6ZUT1 292 aaPredicted RBP18.76■□□□□ 0.59
NFIX-210ENST00000588228 LUZP1Q86V48 1076 aa18.76■□□□□ 0.59
NFIX-210ENST00000588228 CEP57L1Q8IYX8 460 aa18.76■□□□□ 0.59
NFIX-210ENST00000588228 PDILTQ8N807 584 aa18.76■□□□□ 0.59
NFIX-210ENST00000588228 NAT10Q9H0A0 1025 aaKnown RBP18.76■□□□□ 0.59
NFIX-210ENST00000588228 ZNF112Q9UJU3 913 aa18.76■□□□□ 0.59
NFIX-210ENST00000588228 FEM1BQ9UK73 627 aa18.76■□□□□ 0.59
NFIX-210ENST00000588228 A0A087X0B3 334 aa18.76■□□□□ 0.59
NFIX-210ENST00000588228 SLFN14P0C7P3 912 aa18.76■□□□□ 0.59
NFIX-210ENST00000588228 TXLNAP40222 546 aa18.76■□□□□ 0.59
NFIX-210ENST00000588228 HIRAP54198 1017 aaPredicted RBP18.76■□□□□ 0.59
NFIX-210ENST00000588228 SNAP25P60880 206 aa18.76■□□□□ 0.59
NFIX-210ENST00000588228 POSTNQ15063 836 aa18.76■□□□□ 0.59
NFIX-210ENST00000588228 CCDC84Q86UT8 332 aaPredicted RBP18.76■□□□□ 0.59
NFIX-210ENST00000588228 TEX2Q8IWB9 1127 aa18.76■□□□□ 0.59
NFIX-210ENST00000588228 LPAR1Q92633 364 aa18.76■□□□□ 0.59
NFIX-210ENST00000588228 DHX58Q96C10 678 aa18.76■□□□□ 0.59
NFIX-210ENST00000588228 KIAA1683Q9H0B3 1180 aa18.76■□□□□ 0.59
NFIX-210ENST00000588228 PITPNM2Q9BZ72 1349 aa18.75■□□□□ 0.59
NFIX-210ENST00000588228 DDNO94850 711 aaPredicted RBP18.75■□□□□ 0.59
NFIX-210ENST00000588228 LMOD1P29536 600 aaPredicted RBP18.75■□□□□ 0.59
NFIX-210ENST00000588228 AP3B2Q13367 1082 aa18.75■□□□□ 0.59
NFIX-210ENST00000588228 PPP4R3AQ6IN85 833 aa18.75■□□□□ 0.59
NFIX-210ENST00000588228 NAP1L4Q99733 375 aaKnown RBP18.75■□□□□ 0.59
NFIX-210ENST00000588228 RANBP17Q9H2T7 1088 aaKnown RBP18.75■□□□□ 0.59
NFIX-210ENST00000588228 INPP5BP32019 993 aa18.74■□□□□ 0.59
NFIX-210ENST00000588228 IQCB1Q15051 598 aa18.74■□□□□ 0.59
NFIX-210ENST00000588228 SCYL3Q8IZE3 742 aa18.74■□□□□ 0.59
NFIX-210ENST00000588228 IQUBQ8NA54 791 aa18.74■□□□□ 0.59
NFIX-210ENST00000588228 AK8Q96MA6 479 aa18.74■□□□□ 0.59
NFIX-210ENST00000588228 BPIFA3Q9BQP9 254 aa18.74■□□□□ 0.59
NFIX-210ENST00000588228 ADARB2Q9NS39 739 aaKnown RBP18.74■□□□□ 0.59
NFIX-210ENST00000588228 PCDHA5Q9Y5H7 936 aa18.74■□□□□ 0.59
NFIX-210ENST00000588228 USP17L15C9J2P7 530 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 USP17L13C9JLJ4 530 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 USP17L11C9JVI0 530 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 USP17L18D6R9N7 530 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 USP17L22D6RA61 530 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 USP17L17D6RBQ6 530 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 USP17L19D6RCP7 530 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 USP17L20D6RJB6 530 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 MEIS2O14770 477 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 WDR46O15213 610 aaKnown RBP18.73■□□□□ 0.59
NFIX-210ENST00000588228 EDIL3O43854 480 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 GCFC2P16383 781 aaKnown RBP18.73■□□□□ 0.59
NFIX-210ENST00000588228 USP17L24Q0WX57 530 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 DPCR1Q3MIW9 517 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 USH1GQ495M9 461 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 USP17L6PQ6QN14 398 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 SH3RF1Q7Z6J0 888 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 SBF1O95248 1867 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 A0A087WWV3 80 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 BIN1O00499 593 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 FOXN1O15353 648 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 E2F4Q16254 413 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 NT5DC1Q5TFE4 455 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 C9orf131Q5VYM1 1079 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 KIFC2Q96AC6 838 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 MTMR9Q96QG7 549 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 ANO3Q9BYT9 981 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 CCSER1Q9C0I3 900 aa18.73■□□□□ 0.59
NFIX-210ENST00000588228 TDP2O95551 362 aa18.72■□□□□ 0.59
NFIX-210ENST00000588228 FOSP01100 380 aaPredicted RBP18.72■□□□□ 0.59
NFIX-210ENST00000588228 SARSP49591 514 aaKnown RBP18.72■□□□□ 0.59
NFIX-210ENST00000588228 CALCRLQ16602 461 aa18.72■□□□□ 0.59
NFIX-210ENST00000588228 POTEDQ86YR6 584 aa18.72■□□□□ 0.59
NFIX-210ENST00000588228 TRIM44Q96DX7 344 aaPredicted RBP18.72■□□□□ 0.59
NFIX-210ENST00000588228 WRNIP1Q96S55 665 aa18.72■□□□□ 0.59
NFIX-210ENST00000588228 WDR18Q9BV38 432 aa18.72■□□□□ 0.59
NFIX-210ENST00000588228 GOLGA6L19H0YKK7 550 aa18.71■□□□□ 0.59
NFIX-210ENST00000588228 PIK3CDO00329 1044 aa18.71■□□□□ 0.59
NFIX-210ENST00000588228 UBA7P41226 1012 aa18.71■□□□□ 0.59
NFIX-210ENST00000588228 USP11P51784 963 aa18.71■□□□□ 0.59
NFIX-210ENST00000588228 USP14P54578 494 aa18.71■□□□□ 0.59
NFIX-210ENST00000588228 SUPT20HL1Q3ZLR7 823 aa18.71■□□□□ 0.59
NFIX-210ENST00000588228 PRAMEF18Q5VWM3 479 aa18.71■□□□□ 0.59
NFIX-210ENST00000588228 TRIML1Q8N9V2 468 aa18.71■□□□□ 0.59
NFIX-210ENST00000588228 SPATA20Q8TB22 786 aa18.71■□□□□ 0.59
NFIX-210ENST00000588228 SMARCE1Q969G3 411 aa18.71■□□□□ 0.59
NFIX-210ENST00000588228 PAGE5Q96GU1 130 aa18.71■□□□□ 0.59
NFIX-210ENST00000588228 AS3MTQ9HBK9 375 aa18.71■□□□□ 0.59
NFIX-210ENST00000588228 PICK1Q9NRD5 415 aa18.71■□□□□ 0.59
NFIX-210ENST00000588228 ATAD5Q96QE3 1844 aa18.71■□□□□ 0.59
NFIX-210ENST00000588228 BECN2A8MW95 431 aa18.7■□□□□ 0.58
NFIX-210ENST00000588228 SLC37A4O43826 429 aa18.7■□□□□ 0.58
NFIX-210ENST00000588228 SMC2O95347 1197 aa18.7■□□□□ 0.58
NFIX-210ENST00000588228 ADCY5O95622 1261 aa18.7■□□□□ 0.58
NFIX-210ENST00000588228 PRR29P0C7W0 189 aa18.7■□□□□ 0.58
NFIX-210ENST00000588228 DHX40Q8IX18 779 aaKnown RBP18.7■□□□□ 0.58
NFIX-210ENST00000588228 KLRG1Q96E93 195 aa18.7■□□□□ 0.58
NFIX-210ENST00000588228 DISC1Q9NRI5 854 aa18.7■□□□□ 0.58
NFIX-210ENST00000588228 FBXO28Q9NVF7 368 aa18.7■□□□□ 0.58
NFIX-210ENST00000588228 DDX25Q9UHL0 483 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms