RNA–Protein interactions for RNA: ENST00000588166.1

KDM4B-204, Transcript of lysine demethylase 4B, humanhuman

TSL 5

Gene KDM4B, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-204ENST00000588166 UPF3AQ9H1J1 476 aaKnown RBP17.29■□□□□ 0.36
KDM4B-204ENST00000588166 ELP1O95163 1332 aa17.28■□□□□ 0.36
KDM4B-204ENST00000588166 CTAGE5O15320 804 aa17.28■□□□□ 0.36
KDM4B-204ENST00000588166 CDC45O75419 566 aa17.28■□□□□ 0.36
KDM4B-204ENST00000588166 ACVR2BQ13705 512 aa17.28■□□□□ 0.36
KDM4B-204ENST00000588166 RRP12Q5JTH9 1297 aaKnown RBP17.28■□□□□ 0.36
KDM4B-204ENST00000588166 MFSD5Q6N075 450 aa17.28■□□□□ 0.36
KDM4B-204ENST00000588166 CEP95Q96GE4 821 aa17.28■□□□□ 0.36
KDM4B-204ENST00000588166 ESYT1Q9BSJ8 1104 aa17.28■□□□□ 0.36
KDM4B-204ENST00000588166 KATNBL1Q9H079 304 aa17.28■□□□□ 0.36
KDM4B-204ENST00000588166 SLC38A10Q9HBR0 1119 aa17.28■□□□□ 0.36
KDM4B-204ENST00000588166 ZHX1Q9UKY1 873 aaPredicted RBP17.28■□□□□ 0.36
KDM4B-204ENST00000588166 SYNPO2Q9UMS6 1093 aa17.28■□□□□ 0.36
KDM4B-204ENST00000588166 U3KPZ7 1027 aaPredicted RBP17.28■□□□□ 0.36
KDM4B-204ENST00000588166 TTLL1O95922 423 aa17.27■□□□□ 0.36
KDM4B-204ENST00000588166 GJA9P57773 515 aa17.27■□□□□ 0.36
KDM4B-204ENST00000588166 NKX3-2P78367 333 aa17.27■□□□□ 0.36
KDM4B-204ENST00000588166 TMEM240Q5SV17 173 aa17.27■□□□□ 0.36
KDM4B-204ENST00000588166 TBC1D10CQ8IV04 446 aa17.27■□□□□ 0.36
KDM4B-204ENST00000588166 MKL1Q969V6 931 aa17.27■□□□□ 0.36
KDM4B-204ENST00000588166 DDX11Q96FC9 970 aa17.27■□□□□ 0.36
KDM4B-204ENST00000588166 ZNF576Q9H609 170 aa17.27■□□□□ 0.36
KDM4B-204ENST00000588166 PRDM6Q9NQX0 595 aa17.27■□□□□ 0.36
KDM4B-204ENST00000588166 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.27■□□□□ 0.36
KDM4B-204ENST00000588166 MTMR4Q9NYA4 1195 aa17.27■□□□□ 0.36
KDM4B-204ENST00000588166 ASGR1P07306 291 aa17.26■□□□□ 0.35
KDM4B-204ENST00000588166 CCDC144BQ3MJ40 725 aa17.26■□□□□ 0.35
KDM4B-204ENST00000588166 CPXCR1Q8N123 301 aa17.26■□□□□ 0.35
KDM4B-204ENST00000588166 ESR2Q92731 530 aa17.26■□□□□ 0.35
KDM4B-204ENST00000588166 TIFAQ96CG3 184 aa17.26■□□□□ 0.35
KDM4B-204ENST00000588166 GLT1D1Q96MS3 346 aa17.26■□□□□ 0.35
KDM4B-204ENST00000588166 ABHD16BQ9H3Z7 469 aa17.26■□□□□ 0.35
KDM4B-204ENST00000588166 RAVER2Q9HCJ3 691 aaKnown RBP17.26■□□□□ 0.35
KDM4B-204ENST00000588166 INCENPQ9NQS7 918 aa17.26■□□□□ 0.35
KDM4B-204ENST00000588166 CLIP2Q9UDT6 1046 aa17.26■□□□□ 0.35
KDM4B-204ENST00000588166 LRRC37A2A6NM11 1700 aa17.26■□□□□ 0.35
KDM4B-204ENST00000588166 MROH7Q68CQ1 1323 aa17.25■□□□□ 0.35
KDM4B-204ENST00000588166 ARVCFO00192 962 aa17.25■□□□□ 0.35
KDM4B-204ENST00000588166 C6orf222P0C671 652 aaPredicted RBP17.25■□□□□ 0.35
KDM4B-204ENST00000588166 PBX2P40425 430 aa17.25■□□□□ 0.35
KDM4B-204ENST00000588166 PTH1RQ03431 593 aa17.25■□□□□ 0.35
KDM4B-204ENST00000588166 ARMCX2Q7L311 632 aa17.25■□□□□ 0.35
KDM4B-204ENST00000588166 FAM126BQ8IXS8 530 aa17.25■□□□□ 0.35
KDM4B-204ENST00000588166 PCSK9Q8NBP7 692 aaKnown RBP17.25■□□□□ 0.35
KDM4B-204ENST00000588166 PBX4Q9BYU1 374 aa17.25■□□□□ 0.35
KDM4B-204ENST00000588166 KRT23Q9C075 422 aa17.25■□□□□ 0.35
KDM4B-204ENST00000588166 CNNM2Q9H8M5 875 aa17.25■□□□□ 0.35
KDM4B-204ENST00000588166 GBF1Q92538 1859 aa17.24■□□□□ 0.35
KDM4B-204ENST00000588166 A0A0U1RQG5 324 aaPredicted RBP17.24■□□□□ 0.35
KDM4B-204ENST00000588166 GRXCR1A8MXD5 290 aa17.24■□□□□ 0.35
KDM4B-204ENST00000588166 ZBED4O75132 1171 aa17.24■□□□□ 0.35
KDM4B-204ENST00000588166 CSF2RAP15509 400 aa17.24■□□□□ 0.35
KDM4B-204ENST00000588166 OAZ1P54368 228 aa17.24■□□□□ 0.35
KDM4B-204ENST00000588166 PPIGQ13427 754 aaKnown RBP eCLIP17.24■□□□□ 0.352e-7■■□□□ 13.6
KDM4B-204ENST00000588166 GMCL1P1Q8NEA9 526 aa17.24■□□□□ 0.35
KDM4B-204ENST00000588166 CHST13Q8NET6 341 aa17.24■□□□□ 0.35
KDM4B-204ENST00000588166 SYMPKQ92797 1274 aaKnown RBP17.24■□□□□ 0.35
KDM4B-204ENST00000588166 KIFC2Q96AC6 838 aa17.24■□□□□ 0.35
KDM4B-204ENST00000588166 TCP11L1Q9NUJ3 509 aa17.24■□□□□ 0.35
KDM4B-204ENST00000588166 FEM1BQ9UK73 627 aa17.24■□□□□ 0.35
KDM4B-204ENST00000588166 STX8Q9UNK0 236 aa17.24■□□□□ 0.35
KDM4B-204ENST00000588166 ASTN1O14525 1302 aa17.23■□□□□ 0.35
KDM4B-204ENST00000588166 NEDD4P46934 1319 aa17.23■□□□□ 0.35
KDM4B-204ENST00000588166 CD4P01730 458 aa17.23■□□□□ 0.35
KDM4B-204ENST00000588166 SLC4A3P48751 1232 aa17.23■□□□□ 0.35
KDM4B-204ENST00000588166 CCDC178Q5BJE1 867 aa17.23■□□□□ 0.35
KDM4B-204ENST00000588166 TJAP1Q5JTD0 557 aa17.23■□□□□ 0.35
KDM4B-204ENST00000588166 CCDC144CPQ8IYA2 1237 aa17.23■□□□□ 0.35
KDM4B-204ENST00000588166 LRRC47Q8N1G4 583 aaKnown RBP17.23■□□□□ 0.35
KDM4B-204ENST00000588166 ANKRD35Q8N283 1001 aa17.23■□□□□ 0.35
KDM4B-204ENST00000588166 FAM133AQ8N9E0 248 aa17.23■□□□□ 0.35
KDM4B-204ENST00000588166 MAP4K1Q92918 833 aa17.23■□□□□ 0.35
KDM4B-204ENST00000588166 FBXO40Q9UH90 709 aa17.23■□□□□ 0.35
KDM4B-204ENST00000588166 LCTP09848 1927 aa17.23■□□□□ 0.35
KDM4B-204ENST00000588166 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.22■□□□□ 0.35
KDM4B-204ENST00000588166 CNTN2Q02246 1040 aa17.22■□□□□ 0.35
KDM4B-204ENST00000588166 TRDNQ13061 729 aa17.22■□□□□ 0.35
KDM4B-204ENST00000588166 GNASQ5JWF2 1037 aa17.22■□□□□ 0.35
KDM4B-204ENST00000588166 IQCA1Q86XH1 822 aa17.22■□□□□ 0.35
KDM4B-204ENST00000588166 SLC43A3Q8NBI5 491 aa17.22■□□□□ 0.35
KDM4B-204ENST00000588166 ANO2Q9NQ90 1003 aa17.22■□□□□ 0.35
KDM4B-204ENST00000588166 IL17RBQ9NRM6 502 aa17.22■□□□□ 0.35
KDM4B-204ENST00000588166 RBM8AQ9Y5S9 174 aaKnown RBP17.22■□□□□ 0.35
KDM4B-204ENST00000588166 ZNF536O15090 1300 aa17.21■□□□□ 0.35
KDM4B-204ENST00000588166 B4E1Z4 1266 aa17.21■□□□□ 0.35
KDM4B-204ENST00000588166 NMT2O60551 498 aa17.21■□□□□ 0.35
KDM4B-204ENST00000588166 KDM4AO75164 1064 aa17.21■□□□□ 0.35
KDM4B-204ENST00000588166 CYP21A2P08686 494 aa17.21■□□□□ 0.35
KDM4B-204ENST00000588166 ACRP10323 421 aa17.21■□□□□ 0.35
KDM4B-204ENST00000588166 ZNF365Q70YC5 407 aa17.21■□□□□ 0.35
KDM4B-204ENST00000588166 TMEM199Q8N511 208 aa17.21■□□□□ 0.35
KDM4B-204ENST00000588166 TTC14Q96N46 770 aa17.21■□□□□ 0.35
KDM4B-204ENST00000588166 PPP1R12CQ9BZL4 782 aa17.21■□□□□ 0.35
KDM4B-204ENST00000588166 LSG1Q9H089 658 aaKnown RBP17.21■□□□□ 0.35
KDM4B-204ENST00000588166 SPC25Q9HBM1 224 aa17.21■□□□□ 0.35
KDM4B-204ENST00000588166 GNEQ9Y223 722 aaKnown RBP17.21■□□□□ 0.35
KDM4B-204ENST00000588166 GRIN2DO15399 1336 aa17.21■□□□□ 0.34
KDM4B-204ENST00000588166 SOWAHBA6NEL2 793 aa17.2■□□□□ 0.34
KDM4B-204ENST00000588166 NOVP48745 357 aa17.2■□□□□ 0.34
KDM4B-204ENST00000588166 BEX3Q00994 111 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms