RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 SYNGAP1Q96PV0 1343 aa11.77□□□□□ -0.53
TPM4-207ENST00000588032 LOC102724159A0A0B4J2E5 919 aa11.76□□□□□ -0.53
TPM4-207ENST00000588032 SH2B2O14492 632 aaPredicted RBP11.76□□□□□ -0.53
TPM4-207ENST00000588032 PSMA5P28066 241 aa11.76□□□□□ -0.53
TPM4-207ENST00000588032 CNGA1P29973 690 aa11.76□□□□□ -0.53
TPM4-207ENST00000588032 CCND3P30281 292 aaPredicted RBP11.76□□□□□ -0.53
TPM4-207ENST00000588032 EXOSC10Q01780 885 aaKnown RBP11.76□□□□□ -0.53
TPM4-207ENST00000588032 PWP2Q15269 919 aaKnown RBP11.76□□□□□ -0.53
TPM4-207ENST00000588032 CDC37Q16543 378 aaPredicted RBP11.76□□□□□ -0.53
TPM4-207ENST00000588032 MUM1L1Q5H9M0 696 aa11.76□□□□□ -0.53
TPM4-207ENST00000588032 SYNE3Q6ZMZ3 975 aa11.76□□□□□ -0.53
TPM4-207ENST00000588032 SGMS1Q86VZ5 419 aa11.76□□□□□ -0.53
TPM4-207ENST00000588032 ZNF654Q8IZM8 581 aa11.76□□□□□ -0.53
TPM4-207ENST00000588032 STAG2Q8N3U4 1231 aa11.76□□□□□ -0.53
TPM4-207ENST00000588032 FAM133AQ8N9E0 248 aa11.76□□□□□ -0.53
TPM4-207ENST00000588032 SHISA4Q96DD7 197 aa11.76□□□□□ -0.53
TPM4-207ENST00000588032 MTMR8Q96EF0 704 aa11.76□□□□□ -0.53
TPM4-207ENST00000588032 RIOX1Q9H6W3 641 aa11.76□□□□□ -0.53
TPM4-207ENST00000588032 JMJD4Q9H9V9 463 aa11.76□□□□□ -0.53
TPM4-207ENST00000588032 SENP2Q9HC62 589 aa11.76□□□□□ -0.53
TPM4-207ENST00000588032 VAT1LQ9HCJ6 419 aa11.76□□□□□ -0.53
TPM4-207ENST00000588032 CYP39A1Q9NYL5 469 aa11.76□□□□□ -0.53
TPM4-207ENST00000588032 DDX20Q9UHI6 824 aaKnown RBP11.76□□□□□ -0.53
TPM4-207ENST00000588032 OGDHLQ9ULD0 1010 aa11.76□□□□□ -0.53
TPM4-207ENST00000588032 SLC12A7Q9Y666 1083 aa11.76□□□□□ -0.53
TPM4-207ENST00000588032 ABCB11O95342 1321 aa11.76□□□□□ -0.53
TPM4-207ENST00000588032 ASB14A6NK59 587 aa11.75□□□□□ -0.53
TPM4-207ENST00000588032 ZBTB5O15062 677 aa11.75□□□□□ -0.53
TPM4-207ENST00000588032 SEPT4O43236 478 aa11.75□□□□□ -0.53
TPM4-207ENST00000588032 QRICH1Q2TAL8 776 aa11.75□□□□□ -0.53
TPM4-207ENST00000588032 ADCK5Q3MIX3 580 aa11.75□□□□□ -0.53
TPM4-207ENST00000588032 LHX8Q68G74 356 aa11.75□□□□□ -0.53
TPM4-207ENST00000588032 NSMFQ6X4W1 530 aa11.75□□□□□ -0.53
TPM4-207ENST00000588032 FBXO11Q86XK2 927 aa11.75□□□□□ -0.53
TPM4-207ENST00000588032 MCF2L2Q86YR7 1114 aa11.75□□□□□ -0.53
TPM4-207ENST00000588032 SAMD3Q8N6K7 520 aa11.75□□□□□ -0.53
TPM4-207ENST00000588032 NUP133Q8WUM0 1156 aa11.75□□□□□ -0.53
TPM4-207ENST00000588032 CLEC4DQ8WXI8 215 aa11.75□□□□□ -0.53
TPM4-207ENST00000588032 AMNQ9BXJ7 453 aa11.75□□□□□ -0.53
TPM4-207ENST00000588032 USP26Q9BXU7 913 aa11.75□□□□□ -0.53
TPM4-207ENST00000588032 CPVLQ9H3G5 476 aa11.75□□□□□ -0.53
TPM4-207ENST00000588032 ADD3Q9UEY8 706 aaKnown RBP11.75□□□□□ -0.53
TPM4-207ENST00000588032 MRPL11Q9Y3B7 192 aaKnown RBP11.75□□□□□ -0.53
TPM4-207ENST00000588032 B4DLN1 442 aa11.74□□□□□ -0.53
TPM4-207ENST00000588032 FARP2O94887 1054 aaPredicted RBP11.74□□□□□ -0.53
TPM4-207ENST00000588032 MRPL12P52815 198 aaKnown RBP11.74□□□□□ -0.53
TPM4-207ENST00000588032 CNTN2Q02246 1040 aa11.74□□□□□ -0.53
TPM4-207ENST00000588032 BAATQ14032 418 aaPredicted RBP11.74□□□□□ -0.53
TPM4-207ENST00000588032 BLOC1S2Q6QNY1 142 aa11.74□□□□□ -0.53
TPM4-207ENST00000588032 RNF207Q6ZRF8 634 aa11.74□□□□□ -0.53
TPM4-207ENST00000588032 UBE2Q1Q7Z7E8 422 aa11.74□□□□□ -0.53
TPM4-207ENST00000588032 ARRDC4Q8NCT1 418 aa11.74□□□□□ -0.53
TPM4-207ENST00000588032 TRPV1Q8NER1 839 aa11.74□□□□□ -0.53
TPM4-207ENST00000588032 MPHOSPH6Q99547 160 aaKnown RBP11.74□□□□□ -0.53
TPM4-207ENST00000588032 ABHD16BQ9H3Z7 469 aa11.74□□□□□ -0.53
TPM4-207ENST00000588032 GPHNQ9NQX3 736 aaPredicted RBP11.74□□□□□ -0.53
TPM4-207ENST00000588032 MAP3K20Q9NYL2 800 aaKnown RBP11.74□□□□□ -0.53
TPM4-207ENST00000588032 SNX14Q9Y5W7 946 aa11.74□□□□□ -0.53
TPM4-207ENST00000588032 PNMA6FA0A0J9YX94 578 aa11.73□□□□□ -0.53
TPM4-207ENST00000588032 PTPDC1A2A3K4 754 aa11.73□□□□□ -0.53
TPM4-207ENST00000588032 SOWAHBA6NEL2 793 aa11.73□□□□□ -0.53
TPM4-207ENST00000588032 NFIBO00712 420 aa11.73□□□□□ -0.53
TPM4-207ENST00000588032 SNAI1O95863 264 aaPredicted RBP11.73□□□□□ -0.53
TPM4-207ENST00000588032 ZNF865P0CJ78 1059 aaPredicted RBP11.73□□□□□ -0.53
TPM4-207ENST00000588032 AKR1A1P14550 325 aa11.73□□□□□ -0.53
TPM4-207ENST00000588032 RCAN1P53805 252 aa11.73□□□□□ -0.53
TPM4-207ENST00000588032 FGD1P98174 961 aa11.73□□□□□ -0.53
TPM4-207ENST00000588032 PPP2R5BQ15173 497 aa11.73□□□□□ -0.53
TPM4-207ENST00000588032 USH1GQ495M9 461 aa11.73□□□□□ -0.53
TPM4-207ENST00000588032 PRAMEF19Q5SWL8 479 aa11.73□□□□□ -0.53
TPM4-207ENST00000588032 NECAB2Q7Z6G3 386 aa11.73□□□□□ -0.53
TPM4-207ENST00000588032 FBXL16Q8N461 479 aa11.73□□□□□ -0.53
TPM4-207ENST00000588032 FANCBQ8NB91 859 aa11.73□□□□□ -0.53
TPM4-207ENST00000588032 DNERQ8NFT8 737 aa11.73□□□□□ -0.53
TPM4-207ENST00000588032 FGD4Q96M96 766 aa11.73□□□□□ -0.53
TPM4-207ENST00000588032 JAKMIP1Q96N16 626 aaKnown RBP11.73□□□□□ -0.53
TPM4-207ENST00000588032 HTATIP2Q9BUP3 242 aa11.73□□□□□ -0.53
TPM4-207ENST00000588032 SPZ1Q9BXG8 430 aa11.73□□□□□ -0.53
TPM4-207ENST00000588032 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.73□□□□□ -0.53
TPM4-207ENST00000588032 ZNFX1Q9P2E3 1918 aaKnown RBP11.73□□□□□ -0.53
TPM4-207ENST00000588032 FAM184BQ9ULE4 1060 aa11.73□□□□□ -0.53
TPM4-207ENST00000588032 CYTH3O43739 400 aa11.72□□□□□ -0.53
TPM4-207ENST00000588032 MYCNP04198 464 aaPredicted RBP11.72□□□□□ -0.53
TPM4-207ENST00000588032 RARBP10826 455 aa11.72□□□□□ -0.53
TPM4-207ENST00000588032 RPS6P62753 249 aaKnown RBP11.72□□□□□ -0.53
TPM4-207ENST00000588032 ACVR2BQ13705 512 aa11.72□□□□□ -0.53
TPM4-207ENST00000588032 COL9A3Q14050 684 aaPredicted RBP11.72□□□□□ -0.53
TPM4-207ENST00000588032 APOA5Q6Q788 366 aa11.72□□□□□ -0.53
TPM4-207ENST00000588032 ARMCX2Q7L311 632 aa11.72□□□□□ -0.53
TPM4-207ENST00000588032 CCDC144CPQ8IYA2 1237 aa11.72□□□□□ -0.53
TPM4-207ENST00000588032 MORC4Q8TE76 937 aa11.72□□□□□ -0.53
TPM4-207ENST00000588032 RRP36Q96EU6 259 aaKnown RBP11.72□□□□□ -0.53
TPM4-207ENST00000588032 MYL10Q9BUA6 226 aa11.72□□□□□ -0.53
TPM4-207ENST00000588032 LRRC2Q9BYS8 371 aa11.72□□□□□ -0.53
TPM4-207ENST00000588032 TM6SF1Q9BZW5 370 aa11.72□□□□□ -0.53
TPM4-207ENST00000588032 RBM28Q9NW13 759 aaKnown RBP11.72□□□□□ -0.53
TPM4-207ENST00000588032 PCDHA1Q9Y5I3 950 aa11.72□□□□□ -0.53
TPM4-207ENST00000588032 KIAA0100Q14667 2235 aaKnown RBP11.71□□□□□ -0.53
TPM4-207ENST00000588032 DNM1LO00429 736 aa11.71□□□□□ -0.53
TPM4-207ENST00000588032 ZBTB43O43298 467 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms