RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 KCNH3Q9ULD8 1083 aa10.86□□□□□ -0.67
LINC01539-201ENST00000587904 TUBB4AP04350 444 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 OAS2P29728 719 aaKnown RBP10.85□□□□□ -0.67
LINC01539-201ENST00000587904 RBM5P52756 815 aaKnown RBP eCLIP10.85□□□□□ -0.67
LINC01539-201ENST00000587904 TGFB2P61812 414 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 NFIAQ12857 509 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 PTPN14Q15678 1187 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 MIEF2Q96C03 454 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 BPIFA3Q9BQP9 254 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 NUCKS1Q9H1E3 243 aaKnown RBP10.85□□□□□ -0.67
LINC01539-201ENST00000587904 DNAJC25Q9H1X3 360 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 L2HGDHQ9H9P8 463 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 SEC63Q9UGP8 760 aaKnown RBP10.85□□□□□ -0.67
LINC01539-201ENST00000587904 YDJCA8MPS7 323 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 STXBP3O00186 592 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 CYTH3O43739 400 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 PDHBP11177 359 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 DPEP1P16444 411 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 INHBEP58166 350 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 MTA1Q13330 715 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 WWC2Q6AWC2 1192 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 KANK3Q6NY19 840 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 TADA2BQ86TJ2 420 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 METTL16Q86W50 562 aaKnown RBP10.85□□□□□ -0.67
LINC01539-201ENST00000587904 FOXP4Q8IVH2 680 aaPredicted RBP10.85□□□□□ -0.67
LINC01539-201ENST00000587904 FAXDC2Q96IV6 333 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 CLIC6Q96NY7 704 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 PDGFDQ9GZP0 370 aaPredicted RBP10.85□□□□□ -0.67
LINC01539-201ENST00000587904 FAM198AQ9UFP1 575 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 HDAC9Q9UKV0 1011 aa10.85□□□□□ -0.67
LINC01539-201ENST00000587904 ESYT2A0FGR8 921 aa10.84□□□□□ -0.67
LINC01539-201ENST00000587904 M0R2N6 131 aa10.84□□□□□ -0.67
LINC01539-201ENST00000587904 KCNA3P22001 575 aa10.84□□□□□ -0.67
LINC01539-201ENST00000587904 ATP2C1P98194 919 aaPredicted RBP10.84□□□□□ -0.67
LINC01539-201ENST00000587904 GPATCH4Q5T3I0 446 aaKnown RBP10.84□□□□□ -0.67
LINC01539-201ENST00000587904 RSBN1LQ6PCB5 846 aaPredicted RBP10.84□□□□□ -0.67
LINC01539-201ENST00000587904 HEATR3Q7Z4Q2 680 aa10.84□□□□□ -0.67
LINC01539-201ENST00000587904 ERCC4Q92889 916 aaPredicted RBP10.84□□□□□ -0.67
LINC01539-201ENST00000587904 PYM1Q9BRP8 204 aaKnown RBP10.84□□□□□ -0.67
LINC01539-201ENST00000587904 RIOX1Q9H6W3 641 aa10.84□□□□□ -0.67
LINC01539-201ENST00000587904 TMOD2Q9NZR1 351 aa10.84□□□□□ -0.67
LINC01539-201ENST00000587904 TUBE1Q9UJT0 475 aa10.84□□□□□ -0.67
LINC01539-201ENST00000587904 GOLGA6L19H0YKK7 550 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 AP5Z1O43299 807 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 COQ9O75208 318 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 VIL1P09327 827 aaKnown RBP10.83□□□□□ -0.68
LINC01539-201ENST00000587904 POLD1P28340 1107 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 GNA11P29992 359 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 ADCY2Q08462 1091 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 SLC35G1Q2M3R5 365 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 CFAP100Q494V2 611 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 EARS2Q5JPH6 523 aaKnown RBP10.83□□□□□ -0.68
LINC01539-201ENST00000587904 ARL6IP4Q66PJ3 421 aaKnown RBP10.83□□□□□ -0.68
LINC01539-201ENST00000587904 PPP1R18Q6NYC8 613 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 TATDN1Q6P1N9 297 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 PIK3AP1Q6ZUJ8 805 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 ANKRD23Q86SG2 305 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 LUZP1Q86V48 1076 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 LARGE2Q8N3Y3 721 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 SPC24Q8NBT2 197 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 GIMAP7Q8NHV1 300 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 GPKOWQ92917 476 aaPredicted RBP eCLIP10.83□□□□□ -0.68
LINC01539-201ENST00000587904 ZMYND12Q9H0C1 365 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 C6orf50Q9HD87 102 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 ETAA1Q9NY74 926 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 CCDC194A0A1B0GVG4 234 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 FAM205CA6NFA0 338 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 USP17L5A8MUK1 530 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 LMAN1P49257 510 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 NLRP12P59046 1061 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 ZNF543Q08ER8 600 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 ORC2Q13416 577 aaPredicted RBP10.83□□□□□ -0.68
LINC01539-201ENST00000587904 SMC1AQ14683 1233 aaKnown RBP10.83□□□□□ -0.68
LINC01539-201ENST00000587904 IQCB1Q15051 598 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 USP17L2Q6R6M4 530 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 CNNM3Q8NE01 707 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 PIM2Q9P1W9 311 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 SYNPO2Q9UMS6 1093 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 MYH4Q9Y623 1939 aa10.83□□□□□ -0.68
LINC01539-201ENST00000587904 BECN2A8MW95 431 aa10.82□□□□□ -0.68
LINC01539-201ENST00000587904 TMCO5BA8MYB1 307 aa10.82□□□□□ -0.68
LINC01539-201ENST00000587904 LAD1O00515 517 aa10.82□□□□□ -0.68
LINC01539-201ENST00000587904 GOLGA8HP0CJ92 632 aa10.82□□□□□ -0.68
LINC01539-201ENST00000587904 NAPAP54920 295 aa10.82□□□□□ -0.68
LINC01539-201ENST00000587904 SARM1Q6SZW1 724 aa10.82□□□□□ -0.68
LINC01539-201ENST00000587904 C11orf57Q6ZUT1 292 aaPredicted RBP10.82□□□□□ -0.68
LINC01539-201ENST00000587904 TMEM179Q6ZVK1 233 aa10.82□□□□□ -0.68
LINC01539-201ENST00000587904 CCDC186Q7Z3E2 898 aa10.82□□□□□ -0.68
LINC01539-201ENST00000587904 KRT25Q7Z3Z0 450 aa10.82□□□□□ -0.68
LINC01539-201ENST00000587904 ZNF513Q8N8E2 541 aaPredicted RBP10.82□□□□□ -0.68
LINC01539-201ENST00000587904 AGBL3Q8NEM8 1001 aa10.82□□□□□ -0.68
LINC01539-201ENST00000587904 TATDN2Q93075 761 aa10.82□□□□□ -0.68
LINC01539-201ENST00000587904 MKL1Q969V6 931 aa10.82□□□□□ -0.68
LINC01539-201ENST00000587904 GMLQ99445 158 aa10.82□□□□□ -0.68
LINC01539-201ENST00000587904 MTFR1LQ9H019 292 aa10.82□□□□□ -0.68
LINC01539-201ENST00000587904 DNAJC18Q9H819 358 aa10.82□□□□□ -0.68
LINC01539-201ENST00000587904 KANSL2Q9H9L4 492 aa10.82□□□□□ -0.68
LINC01539-201ENST00000587904 NYAP2Q9P242 653 aa10.82□□□□□ -0.68
LINC01539-201ENST00000587904 CLIP2Q9UDT6 1046 aa10.82□□□□□ -0.68
LINC01539-201ENST00000587904 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms