RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 KRT32Q14532 448 aa17.26■□□□□ 0.35
ATG4D-207ENST00000587256 QRICH1Q2TAL8 776 aa17.26■□□□□ 0.35
ATG4D-207ENST00000587256 MAMDC4Q6UXC1 1216 aa17.26■□□□□ 0.35
ATG4D-207ENST00000587256 ARMCX2Q7L311 632 aa17.26■□□□□ 0.35
ATG4D-207ENST00000587256 IGDCC4Q8TDY8 1250 aa17.26■□□□□ 0.35
ATG4D-207ENST00000587256 FGD4Q96M96 766 aa17.26■□□□□ 0.35
ATG4D-207ENST00000587256 C11orf49Q9H6J7 331 aa17.26■□□□□ 0.35
ATG4D-207ENST00000587256 JMJD4Q9H9V9 463 aa17.26■□□□□ 0.35
ATG4D-207ENST00000587256 GPHNQ9NQX3 736 aaPredicted RBP17.26■□□□□ 0.35
ATG4D-207ENST00000587256 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.26■□□□□ 0.35
ATG4D-207ENST00000587256 ABCB11O95342 1321 aa17.25■□□□□ 0.35
ATG4D-207ENST00000587256 DDAH1O94760 285 aa17.25■□□□□ 0.35
ATG4D-207ENST00000587256 MYCNP04198 464 aaPredicted RBP17.25■□□□□ 0.35
ATG4D-207ENST00000587256 AKR1A1P14550 325 aa17.25■□□□□ 0.35
ATG4D-207ENST00000587256 TROAPQ12815 778 aa17.25■□□□□ 0.35
ATG4D-207ENST00000587256 BAATQ14032 418 aaPredicted RBP17.25■□□□□ 0.35
ATG4D-207ENST00000587256 PRPF38BQ5VTL8 546 aaKnown RBP17.25■□□□□ 0.35
ATG4D-207ENST00000587256 SLC30A10Q6XR72 485 aa17.25■□□□□ 0.35
ATG4D-207ENST00000587256 ZNF654Q8IZM8 581 aa17.25■□□□□ 0.35
ATG4D-207ENST00000587256 CTCFLQ8NI51 663 aaPredicted RBP17.25■□□□□ 0.35
ATG4D-207ENST00000587256 DPF3Q92784 378 aa17.25■□□□□ 0.35
ATG4D-207ENST00000587256 NEK1Q96PY6 1258 aa17.25■□□□□ 0.35
ATG4D-207ENST00000587256 MYL10Q9BUA6 226 aa17.25■□□□□ 0.35
ATG4D-207ENST00000587256 LRRC2Q9BYS8 371 aa17.25■□□□□ 0.35
ATG4D-207ENST00000587256 PALM3A6NDB9 673 aaPredicted RBP17.24■□□□□ 0.35
ATG4D-207ENST00000587256 SOWAHBA6NEL2 793 aa17.24■□□□□ 0.35
ATG4D-207ENST00000587256 ASB14A6NK59 587 aa17.24■□□□□ 0.35
ATG4D-207ENST00000587256 SNAI1O95863 264 aaPredicted RBP17.24■□□□□ 0.35
ATG4D-207ENST00000587256 ZNF865P0CJ78 1059 aaPredicted RBP17.24■□□□□ 0.35
ATG4D-207ENST00000587256 RARBP10826 455 aa17.24■□□□□ 0.35
ATG4D-207ENST00000587256 CALML3P27482 149 aa17.24■□□□□ 0.35
ATG4D-207ENST00000587256 KIF5BP33176 963 aa17.24■□□□□ 0.35
ATG4D-207ENST00000587256 COL9A3Q14050 684 aaPredicted RBP17.24■□□□□ 0.35
ATG4D-207ENST00000587256 RNF207Q6ZRF8 634 aa17.24■□□□□ 0.35
ATG4D-207ENST00000587256 FBXO11Q86XK2 927 aa17.24■□□□□ 0.35
ATG4D-207ENST00000587256 HOMER1Q86YM7 354 aa17.24■□□□□ 0.35
ATG4D-207ENST00000587256 CCDC144CPQ8IYA2 1237 aa17.24■□□□□ 0.35
ATG4D-207ENST00000587256 RASEFQ8IZ41 740 aa17.24■□□□□ 0.35
ATG4D-207ENST00000587256 CLEC4DQ8WXI8 215 aa17.24■□□□□ 0.35
ATG4D-207ENST00000587256 KBTBD13C9JR72 458 aa17.23■□□□□ 0.35
ATG4D-207ENST00000587256 MNX1P50219 401 aaPredicted RBP17.23■□□□□ 0.35
ATG4D-207ENST00000587256 TMTC2Q8N394 836 aa17.23■□□□□ 0.35
ATG4D-207ENST00000587256 ARRDC4Q8NCT1 418 aa17.23■□□□□ 0.35
ATG4D-207ENST00000587256 LENG1Q96BZ8 264 aaPredicted RBP17.23■□□□□ 0.35
ATG4D-207ENST00000587256 AMNQ9BXJ7 453 aa17.23■□□□□ 0.35
ATG4D-207ENST00000587256 ABHD16BQ9H3Z7 469 aa17.23■□□□□ 0.35
ATG4D-207ENST00000587256 XPNPEP3Q9NQH7 507 aa17.23■□□□□ 0.35
ATG4D-207ENST00000587256 ADD3Q9UEY8 706 aaKnown RBP17.23■□□□□ 0.35
ATG4D-207ENST00000587256 LRRC37A2A6NM11 1700 aa17.23■□□□□ 0.35
ATG4D-207ENST00000587256 LCTP09848 1927 aa17.22■□□□□ 0.35
ATG4D-207ENST00000587256 MYH6P13533 1939 aa17.22■□□□□ 0.35
ATG4D-207ENST00000587256 SMCHD1A6NHR9 2005 aa17.22■□□□□ 0.35
ATG4D-207ENST00000587256 DNM1LO00429 736 aa17.22■□□□□ 0.35
ATG4D-207ENST00000587256 ZBTB5O15062 677 aa17.22■□□□□ 0.35
ATG4D-207ENST00000587256 LIFRP42702 1097 aa17.22■□□□□ 0.35
ATG4D-207ENST00000587256 ACVR2BQ13705 512 aa17.22■□□□□ 0.35
ATG4D-207ENST00000587256 ADCK5Q3MIX3 580 aa17.22■□□□□ 0.35
ATG4D-207ENST00000587256 GJC2Q5T442 439 aaPredicted RBP17.22■□□□□ 0.35
ATG4D-207ENST00000587256 TCEANC2Q96MN5 208 aa17.22■□□□□ 0.35
ATG4D-207ENST00000587256 PURBQ96QR8 312 aaKnown RBP17.22■□□□□ 0.35
ATG4D-207ENST00000587256 FAM184BQ9ULE4 1060 aa17.22■□□□□ 0.35
ATG4D-207ENST00000587256 MRPL11Q9Y3B7 192 aaKnown RBP17.22■□□□□ 0.35
ATG4D-207ENST00000587256 SLC12A7Q9Y666 1083 aa17.22■□□□□ 0.35
ATG4D-207ENST00000587256 MCM3APO60318 1980 aa17.22■□□□□ 0.35
ATG4D-207ENST00000587256 ASTN1O14525 1302 aa17.21■□□□□ 0.35
ATG4D-207ENST00000587256 EVI5O60447 810 aa17.21■□□□□ 0.35
ATG4D-207ENST00000587256 HMGB1P09429 215 aaKnown RBP17.21■□□□□ 0.35
ATG4D-207ENST00000587256 CALM1P0DP23 149 aa17.21■□□□□ 0.35
ATG4D-207ENST00000587256 CALM2P0DP24 149 aa17.21■□□□□ 0.35
ATG4D-207ENST00000587256 CALM3P0DP25 149 aa17.21■□□□□ 0.35
ATG4D-207ENST00000587256 HSPA4P34932 840 aa17.21■□□□□ 0.35
ATG4D-207ENST00000587256 ALDH5A1P51649 535 aaPredicted RBP17.21■□□□□ 0.35
ATG4D-207ENST00000587256 RPS6P62753 249 aaKnown RBP17.21■□□□□ 0.35
ATG4D-207ENST00000587256 FGD1P98174 961 aa17.21■□□□□ 0.35
ATG4D-207ENST00000587256 TSGA10IPQ3SY00 556 aa17.21■□□□□ 0.35
ATG4D-207ENST00000587256 DHX32Q7L7V1 743 aaKnown RBP17.21■□□□□ 0.35
ATG4D-207ENST00000587256 MCF2L2Q86YR7 1114 aa17.21■□□□□ 0.35
ATG4D-207ENST00000587256 RAB11FIP4Q86YS3 637 aa17.21■□□□□ 0.35
ATG4D-207ENST00000587256 JAKMIP1Q96N16 626 aaKnown RBP17.21■□□□□ 0.35
ATG4D-207ENST00000587256 PIGSQ96S52 555 aa17.21■□□□□ 0.35
ATG4D-207ENST00000587256 MPHOSPH6Q99547 160 aaKnown RBP17.21■□□□□ 0.35
ATG4D-207ENST00000587256 MAP3K14Q99558 947 aa17.21■□□□□ 0.35
ATG4D-207ENST00000587256 COL6A1P12109 1028 aa17.2■□□□□ 0.34
ATG4D-207ENST00000587256 RXRAP19793 462 aa17.2■□□□□ 0.34
ATG4D-207ENST00000587256 TRAF1Q13077 416 aa17.2■□□□□ 0.34
ATG4D-207ENST00000587256 SLC35G1Q2M3R5 365 aa17.2■□□□□ 0.34
ATG4D-207ENST00000587256 CCDC144BQ3MJ40 725 aa17.2■□□□□ 0.34
ATG4D-207ENST00000587256 SYNE3Q6ZMZ3 975 aa17.2■□□□□ 0.34
ATG4D-207ENST00000587256 EEPD1Q7L9B9 569 aa17.2■□□□□ 0.34
ATG4D-207ENST00000587256 MICU3Q86XE3 530 aa17.2■□□□□ 0.34
ATG4D-207ENST00000587256 FBXO16Q8IX29 292 aaPredicted RBP17.2■□□□□ 0.34
ATG4D-207ENST00000587256 PIBF1Q8WXW3 757 aa17.2■□□□□ 0.34
ATG4D-207ENST00000587256 MTMR8Q96EF0 704 aa17.2■□□□□ 0.34
ATG4D-207ENST00000587256 RIOX1Q9H6W3 641 aa17.2■□□□□ 0.34
ATG4D-207ENST00000587256 PCDHA1Q9Y5I3 950 aa17.2■□□□□ 0.34
ATG4D-207ENST00000587256 NR2E3Q9Y5X4 410 aa17.2■□□□□ 0.34
ATG4D-207ENST00000587256 DDX49Q9Y6V7 483 aaKnown RBP17.2■□□□□ 0.34
ATG4D-207ENST00000587256 PPP1R11O60927 126 aaPredicted RBP17.19■□□□□ 0.34
ATG4D-207ENST00000587256 PGK1P00558 417 aa17.19■□□□□ 0.34
ATG4D-207ENST00000587256 GNAQP50148 359 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms