RNA–Protein interactions for RNA: ENST00000586967.1

CALR-204, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-204ENST00000586967 KIF23Q02241 960 aaPredicted RBP16.92■□□□□ 0.3
CALR-204ENST00000586967 MCTP1Q6DN14 999 aa16.92■□□□□ 0.3
CALR-204ENST00000586967 FAM43AQ8N2R8 423 aa16.92■□□□□ 0.3
CALR-204ENST00000586967 CHST13Q8NET6 341 aa16.92■□□□□ 0.3
CALR-204ENST00000586967 COA7Q96BR5 231 aa16.92■□□□□ 0.3
CALR-204ENST00000586967 FOXP1Q9H334 677 aaPredicted RBP16.92■□□□□ 0.3
CALR-204ENST00000586967 PSTPIP2Q9H939 334 aa16.92■□□□□ 0.3
CALR-204ENST00000586967 ZFYVE28Q9HCC9 887 aa16.92■□□□□ 0.3
CALR-204ENST00000586967 RAVER2Q9HCJ3 691 aaKnown RBP16.92■□□□□ 0.3
CALR-204ENST00000586967 PCDHA4Q9UN74 947 aa16.92■□□□□ 0.3
CALR-204ENST00000586967 PPP1R11O60927 126 aaPredicted RBP16.91■□□□□ 0.3
CALR-204ENST00000586967 FOSBP53539 338 aa16.91■□□□□ 0.3
CALR-204ENST00000586967 SNAP25P60880 206 aa16.91■□□□□ 0.3
CALR-204ENST00000586967 PLS1Q14651 629 aa16.91■□□□□ 0.3
CALR-204ENST00000586967 TAF1CQ15572 869 aaPredicted RBP16.91■□□□□ 0.3
CALR-204ENST00000586967 SNRNP48Q6IEG0 339 aaKnown RBP16.91■□□□□ 0.3
CALR-204ENST00000586967 BRAPQ7Z569 592 aa16.91■□□□□ 0.3
CALR-204ENST00000586967 BLIDQ8IZY5 108 aa16.91■□□□□ 0.3
CALR-204ENST00000586967 REPS2Q8NFH8 660 aa16.91■□□□□ 0.3
CALR-204ENST00000586967 RIC8AQ9NPQ8 531 aa16.91■□□□□ 0.3
CALR-204ENST00000586967 ZNF214Q9UL59 606 aaPredicted RBP16.91■□□□□ 0.3
CALR-204ENST00000586967 MTMR6Q9Y217 621 aa16.91■□□□□ 0.3
CALR-204ENST00000586967 ZNF536O15090 1300 aa16.91■□□□□ 0.3
CALR-204ENST00000586967 COL11A1P12107 1806 aaPredicted RBP16.91■□□□□ 0.3
CALR-204ENST00000586967 BRD1O95696 1058 aa16.9■□□□□ 0.3
CALR-204ENST00000586967 FOSP01100 380 aaPredicted RBP16.9■□□□□ 0.3
CALR-204ENST00000586967 ALAS1P13196 640 aa16.9■□□□□ 0.3
CALR-204ENST00000586967 GUCY1B3Q02153 619 aa16.9■□□□□ 0.3
CALR-204ENST00000586967 TMEM132BQ14DG7 1078 aa16.9■□□□□ 0.3
CALR-204ENST00000586967 RIOX2Q8IUF8 465 aa16.9■□□□□ 0.3
CALR-204ENST00000586967 DIS3L2Q8IYB7 885 aaKnown RBP16.9■□□□□ 0.3
CALR-204ENST00000586967 REXO1Q8N1G1 1221 aaKnown RBP16.9■□□□□ 0.3
CALR-204ENST00000586967 GPRC5AQ8NFJ5 357 aa16.9■□□□□ 0.3
CALR-204ENST00000586967 AGBL1Q96MI9 1066 aa16.9■□□□□ 0.3
CALR-204ENST00000586967 PTPN18Q99952 460 aa16.9■□□□□ 0.3
CALR-204ENST00000586967 PAGR1Q9BTK6 254 aa16.9■□□□□ 0.3
CALR-204ENST00000586967 SPATC1LQ9H0A9 340 aa16.9■□□□□ 0.3
CALR-204ENST00000586967 ACAD9Q9H845 621 aa16.9■□□□□ 0.3
CALR-204ENST00000586967 EHMT1Q9H9B1 1298 aa16.9■□□□□ 0.3
CALR-204ENST00000586967 KCNJ14Q9UNX9 436 aa16.9■□□□□ 0.3
CALR-204ENST00000586967 PIK3CDO00329 1044 aa16.89■□□□□ 0.29
CALR-204ENST00000586967 DTNBO60941 627 aa16.89■□□□□ 0.29
CALR-204ENST00000586967 F13A1P00488 732 aa16.89■□□□□ 0.29
CALR-204ENST00000586967 CYP2C8P10632 490 aa16.89■□□□□ 0.29
CALR-204ENST00000586967 HSPA6P17066 643 aa16.89■□□□□ 0.29
CALR-204ENST00000586967 AP3B2Q13367 1082 aa16.89■□□□□ 0.29
CALR-204ENST00000586967 FAM110CQ1W6H9 321 aa16.89■□□□□ 0.29
CALR-204ENST00000586967 KRT25Q7Z3Z0 450 aa16.89■□□□□ 0.29
CALR-204ENST00000586967 CCAR1Q8IX12 1150 aaKnown RBP16.89■□□□□ 0.29
CALR-204ENST00000586967 SHCBP1Q8NEM2 672 aa16.89■□□□□ 0.29
CALR-204ENST00000586967 TRERF1Q96PN7 1200 aa16.89■□□□□ 0.29
CALR-204ENST00000586967 MROH8Q9H579 483 aa16.89■□□□□ 0.29
CALR-204ENST00000586967 MORF4L1Q9UBU8 362 aa16.89■□□□□ 0.29
CALR-204ENST00000586967 RBBP6Q7Z6E9 1792 aaKnown RBP16.88■□□□□ 0.29
CALR-204ENST00000586967 CCDC194A0A1B0GVG4 234 aa16.88■□□□□ 0.29
CALR-204ENST00000586967 GCOM1H8Y6P7 765 aaPredicted RBP16.88■□□□□ 0.29
CALR-204ENST00000586967 IGF2BP3O00425 579 aaKnown RBP eCLIP16.88■□□□□ 0.294e-12■■■■□ 20.3
CALR-204ENST00000586967 POLR2MP0CAP2 368 aa16.88■□□□□ 0.29
CALR-204ENST00000586967 U2AF2P26368 475 aaKnown RBP eCLIP16.88■□□□□ 0.29
CALR-204ENST00000586967 C1QTNF8P60827 252 aa16.88■□□□□ 0.29
CALR-204ENST00000586967 ERVK-9P63128 1117 aa16.88■□□□□ 0.29
CALR-204ENST00000586967 ERVK-24P63145 666 aa16.88■□□□□ 0.29
CALR-204ENST00000586967 NOSTRINQ8IVI9 506 aa16.88■□□□□ 0.29
CALR-204ENST00000586967 RNF146Q9NTX7 359 aa16.88■□□□□ 0.29
CALR-204ENST00000586967 RBPJLQ9UBG7 517 aa16.88■□□□□ 0.29
CALR-204ENST00000586967 NOL7Q9UMY1 257 aaKnown RBP16.88■□□□□ 0.29
CALR-204ENST00000586967 PFASO15067 1338 aa16.88■□□□□ 0.29
CALR-204ENST00000586967 SPDYE3A6NKU9 549 aa16.87■□□□□ 0.29
CALR-204ENST00000586967 CA12O43570 354 aa16.87■□□□□ 0.29
CALR-204ENST00000586967 TLR2O60603 784 aa16.87■□□□□ 0.29
CALR-204ENST00000586967 ATL3Q6DD88 541 aa16.87■□□□□ 0.29
CALR-204ENST00000586967 TYW1BQ6NUM6 668 aa16.87■□□□□ 0.29
CALR-204ENST00000586967 BTBD7Q9P203 1132 aa16.87■□□□□ 0.29
CALR-204ENST00000586967 BTBD18B2RXH4 712 aa16.86■□□□□ 0.29
CALR-204ENST00000586967 CFBP00751 764 aa16.86■□□□□ 0.29
CALR-204ENST00000586967 VEGFBP49765 207 aa16.86■□□□□ 0.29
CALR-204ENST00000586967 GHRHRQ02643 423 aa16.86■□□□□ 0.29
CALR-204ENST00000586967 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.86■□□□□ 0.29
CALR-204ENST00000586967 NCAPG2Q86XI2 1143 aa16.86■□□□□ 0.29
CALR-204ENST00000586967 ANKRD13CQ8N6S4 541 aa16.86■□□□□ 0.29
CALR-204ENST00000586967 NAP1L4Q99733 375 aaKnown RBP16.86■□□□□ 0.29
CALR-204ENST00000586967 MOV10L1Q9BXT6 1211 aaKnown RBP16.86■□□□□ 0.29
CALR-204ENST00000586967 HOMER2Q9NSB8 354 aa16.86■□□□□ 0.29
CALR-204ENST00000586967 GJB4Q9NTQ9 266 aa16.86■□□□□ 0.29
CALR-204ENST00000586967 AOC2O75106 756 aa16.85■□□□□ 0.29
CALR-204ENST00000586967 CNMDO75829 334 aa16.85■□□□□ 0.29
CALR-204ENST00000586967 MAPK4P31152 587 aa16.85■□□□□ 0.29
CALR-204ENST00000586967 TRAPPC10P48553 1259 aa16.85■□□□□ 0.29
CALR-204ENST00000586967 NONOQ15233 471 aaKnown RBP eCLIP16.85■□□□□ 0.29
CALR-204ENST00000586967 RILPL1Q5EBL4 403 aa16.85■□□□□ 0.29
CALR-204ENST00000586967 RNF207Q6ZRF8 634 aa16.85■□□□□ 0.29
CALR-204ENST00000586967 ZNF396Q96N95 335 aaPredicted RBP16.85■□□□□ 0.29
CALR-204ENST00000586967 MPHOSPH6Q99547 160 aaKnown RBP16.85■□□□□ 0.29
CALR-204ENST00000586967 IVNS1ABPQ9Y6Y0 642 aa16.85■□□□□ 0.29
CALR-204ENST00000586967 THSD7BQ9C0I4 1608 aa16.85■□□□□ 0.29
CALR-204ENST00000586967 B4DLN1 442 aa16.84■□□□□ 0.29
CALR-204ENST00000586967 STRNO43815 780 aa16.84■□□□□ 0.29
CALR-204ENST00000586967 CLK2P49760 499 aaKnown RBP16.84■□□□□ 0.29
CALR-204ENST00000586967 HSD17B4P51659 736 aa16.84■□□□□ 0.29
CALR-204ENST00000586967 RESTQ13127 1097 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms