RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 CCSAPQ6IQ19 270 aaPredicted RBP19.93■□□□□ 0.78
TRIM47-203ENST00000586495 GLT1D1Q96MS3 346 aa19.93■□□□□ 0.78
TRIM47-203ENST00000586495 NEDD4P46934 1319 aa19.93■□□□□ 0.78
TRIM47-203ENST00000586495 MCM3APO60318 1980 aa19.92■□□□□ 0.78
TRIM47-203ENST00000586495 CLTBP09497 229 aa19.92■□□□□ 0.78
TRIM47-203ENST00000586495 SNHG28P0DPA3 235 aa19.92■□□□□ 0.78
TRIM47-203ENST00000586495 ZKSCAN3Q9BRR0 538 aa19.92■□□□□ 0.78
TRIM47-203ENST00000586495 KATNBL1Q9H079 304 aa19.92■□□□□ 0.78
TRIM47-203ENST00000586495 UPF3AQ9H1J1 476 aaKnown RBP19.92■□□□□ 0.78
TRIM47-203ENST00000586495 TRIM43BA6NCK2 446 aa19.91■□□□□ 0.78
TRIM47-203ENST00000586495 DCDC2CA8MYV0 355 aa19.91■□□□□ 0.78
TRIM47-203ENST00000586495 KDM4AO75164 1064 aa19.91■□□□□ 0.78
TRIM47-203ENST00000586495 TNFAIP2Q03169 654 aa19.91■□□□□ 0.78
TRIM47-203ENST00000586495 GNASQ5JWF2 1037 aa19.91■□□□□ 0.78
TRIM47-203ENST00000586495 TTC22Q5TAA0 569 aa19.91■□□□□ 0.78
TRIM47-203ENST00000586495 NOL8Q76FK4 1167 aaKnown RBP19.91■□□□□ 0.78
TRIM47-203ENST00000586495 SH3RF1Q7Z6J0 888 aa19.91■□□□□ 0.78
TRIM47-203ENST00000586495 BADQ92934 168 aa19.91■□□□□ 0.78
TRIM47-203ENST00000586495 TRIM43Q96BQ3 446 aaPredicted RBP19.91■□□□□ 0.78
TRIM47-203ENST00000586495 TOX2Q96NM4 488 aa19.91■□□□□ 0.78
TRIM47-203ENST00000586495 KAT14Q9H8E8 782 aa19.91■□□□□ 0.78
TRIM47-203ENST00000586495 ADD3Q9UEY8 706 aaKnown RBP19.91■□□□□ 0.78
TRIM47-203ENST00000586495 ELP1O95163 1332 aa19.91■□□□□ 0.78
TRIM47-203ENST00000586495 LOC102724159A0A0B4J2E5 919 aa19.9■□□□□ 0.78
TRIM47-203ENST00000586495 MYADML2A6NDP7 307 aa19.9■□□□□ 0.78
TRIM47-203ENST00000586495 ADCY6O43306 1168 aa19.9■□□□□ 0.78
TRIM47-203ENST00000586495 PQBP1O60828 265 aaKnown RBP19.9■□□□□ 0.78
TRIM47-203ENST00000586495 ASGR1P07306 291 aa19.9■□□□□ 0.78
TRIM47-203ENST00000586495 PDE4AP27815 886 aa19.9■□□□□ 0.78
TRIM47-203ENST00000586495 PWP2Q15269 919 aaKnown RBP19.9■□□□□ 0.78
TRIM47-203ENST00000586495 VTI1AQ96AJ9 217 aa19.9■□□□□ 0.78
TRIM47-203ENST00000586495 KRT23Q9C075 422 aa19.9■□□□□ 0.78
TRIM47-203ENST00000586495 CNNM2Q9H8M5 875 aa19.9■□□□□ 0.78
TRIM47-203ENST00000586495 DNAH12Q6ZR08 3092 aa19.89■□□□□ 0.78
TRIM47-203ENST00000586495 PTPDC1A2A3K4 754 aa19.89■□□□□ 0.77
TRIM47-203ENST00000586495 B4E1Z4 1266 aa19.89■□□□□ 0.77
TRIM47-203ENST00000586495 NKX3-2P78367 333 aa19.89■□□□□ 0.77
TRIM47-203ENST00000586495 BAATQ14032 418 aaPredicted RBP19.89■□□□□ 0.77
TRIM47-203ENST00000586495 MROH7Q68CQ1 1323 aa19.89■□□□□ 0.77
TRIM47-203ENST00000586495 IQSEC1Q6DN90 963 aa19.89■□□□□ 0.77
TRIM47-203ENST00000586495 ANKRD33Q7Z3H0 272 aa19.89■□□□□ 0.77
TRIM47-203ENST00000586495 PNMA1Q8ND90 353 aa19.89■□□□□ 0.77
TRIM47-203ENST00000586495 WDR19Q8NEZ3 1342 aa19.89■□□□□ 0.77
TRIM47-203ENST00000586495 RUFY2Q8WXA3 655 aa19.89■□□□□ 0.77
TRIM47-203ENST00000586495 ANKS1AQ92625 1134 aa19.89■□□□□ 0.77
TRIM47-203ENST00000586495 ZSCAN10Q96SZ4 725 aaPredicted RBP19.89■□□□□ 0.77
TRIM47-203ENST00000586495 VTA1Q9NP79 307 aa19.89■□□□□ 0.77
TRIM47-203ENST00000586495 TMEM39AQ9NV64 488 aa19.89■□□□□ 0.77
TRIM47-203ENST00000586495 ASTN1O14525 1302 aa19.88■□□□□ 0.77
TRIM47-203ENST00000586495 RAD50Q92878 1312 aa19.88■□□□□ 0.77
TRIM47-203ENST00000586495 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.88■□□□□ 0.77
TRIM47-203ENST00000586495 NFIBO00712 420 aa19.88■□□□□ 0.77
TRIM47-203ENST00000586495 KIAA0355O15063 1070 aa19.88■□□□□ 0.77
TRIM47-203ENST00000586495 GSPT1P15170 499 aaKnown RBP19.88■□□□□ 0.77
TRIM47-203ENST00000586495 RAG1P15918 1043 aa19.88■□□□□ 0.77
TRIM47-203ENST00000586495 EEPD1Q7L9B9 569 aa19.88■□□□□ 0.77
TRIM47-203ENST00000586495 MORC4Q8TE76 937 aa19.88■□□□□ 0.77
TRIM47-203ENST00000586495 MPHOSPH6Q99547 160 aaKnown RBP19.88■□□□□ 0.77
TRIM47-203ENST00000586495 AP5M1Q9H0R1 490 aa19.88■□□□□ 0.77
TRIM47-203ENST00000586495 ZSWIM5Q9P217 1185 aa19.88■□□□□ 0.77
TRIM47-203ENST00000586495 GNEQ9Y223 722 aaKnown RBP19.88■□□□□ 0.77
TRIM47-203ENST00000586495 LTBP2Q14767 1821 aa19.88■□□□□ 0.77
TRIM47-203ENST00000586495 SZT2Q5T011 3432 aa19.88■□□□□ 0.77
TRIM47-203ENST00000586495 A0A0U1RQG5 324 aaPredicted RBP19.87■□□□□ 0.77
TRIM47-203ENST00000586495 ZEB2O60315 1214 aa19.87■□□□□ 0.77
TRIM47-203ENST00000586495 GOLGA8HP0CJ92 632 aa19.87■□□□□ 0.77
TRIM47-203ENST00000586495 ALDH5A1P51649 535 aaPredicted RBP19.87■□□□□ 0.77
TRIM47-203ENST00000586495 IRX5P78411 483 aaPredicted RBP19.87■□□□□ 0.77
TRIM47-203ENST00000586495 IRX6P78412 446 aaPredicted RBP19.87■□□□□ 0.77
TRIM47-203ENST00000586495 RNF207Q6ZRF8 634 aa19.87■□□□□ 0.77
TRIM47-203ENST00000586495 TLK2Q86UE8 772 aa19.87■□□□□ 0.77
TRIM47-203ENST00000586495 FBXO16Q8IX29 292 aaPredicted RBP19.87■□□□□ 0.77
TRIM47-203ENST00000586495 DEFB123Q8N688 67 aa19.87■□□□□ 0.77
TRIM47-203ENST00000586495 UBAC1Q9BSL1 405 aa19.87■□□□□ 0.77
TRIM47-203ENST00000586495 UBA5Q9GZZ9 404 aa19.87■□□□□ 0.77
TRIM47-203ENST00000586495 Q9Y3F1 56 aa19.87■□□□□ 0.77
TRIM47-203ENST00000586495 LAMA4Q16363 1823 aa19.87■□□□□ 0.77
TRIM47-203ENST00000586495 TNKSO95271 1327 aa19.86■□□□□ 0.77
TRIM47-203ENST00000586495 CABYRO75952 493 aa19.86■□□□□ 0.77
TRIM47-203ENST00000586495 FAAP100Q0VG06 881 aa19.86■□□□□ 0.77
TRIM47-203ENST00000586495 ASPRV1Q53RT3 343 aa19.86■□□□□ 0.77
TRIM47-203ENST00000586495 TAPT1Q6NXT6 567 aa19.86■□□□□ 0.77
TRIM47-203ENST00000586495 KIAA1211Q6ZU35 1233 aa19.86■□□□□ 0.77
TRIM47-203ENST00000586495 CLEC4DQ8WXI8 215 aa19.86■□□□□ 0.77
TRIM47-203ENST00000586495 PURBQ96QR8 312 aaKnown RBP19.86■□□□□ 0.77
TRIM47-203ENST00000586495 B4DLN1 442 aa19.85■□□□□ 0.77
TRIM47-203ENST00000586495 ARVCFO00192 962 aa19.85■□□□□ 0.77
TRIM47-203ENST00000586495 TLR3O15455 904 aaKnown RBP19.85■□□□□ 0.77
TRIM47-203ENST00000586495 DYNC1LI2O43237 492 aaPredicted RBP19.85■□□□□ 0.77
TRIM47-203ENST00000586495 SMPD1P17405 629 aa19.85■□□□□ 0.77
TRIM47-203ENST00000586495 CALML3P27482 149 aa19.85■□□□□ 0.77
TRIM47-203ENST00000586495 CDK7P50613 346 aa19.85■□□□□ 0.77
TRIM47-203ENST00000586495 MRPL12P52815 198 aaKnown RBP19.85■□□□□ 0.77
TRIM47-203ENST00000586495 BEX3Q00994 111 aa19.85■□□□□ 0.77
TRIM47-203ENST00000586495 TRDNQ13061 729 aa19.85■□□□□ 0.77
TRIM47-203ENST00000586495 SHHQ15465 462 aa19.85■□□□□ 0.77
TRIM47-203ENST00000586495 ENAHQ8N8S7 591 aaPredicted RBP19.85■□□□□ 0.77
TRIM47-203ENST00000586495 MAF1Q9H063 256 aa19.85■□□□□ 0.77
TRIM47-203ENST00000586495 PDGFCQ9NRA1 345 aa19.85■□□□□ 0.77
TRIM47-203ENST00000586495 LAMA3Q16787 3333 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms