RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 SOX10P56693 466 aa16.05■□□□□ 0.16
PRKCSH-202ENST00000585540 CACNB2Q08289 660 aaPredicted RBP16.05■□□□□ 0.16
PRKCSH-202ENST00000585540 COL9A3Q14050 684 aaPredicted RBP16.05■□□□□ 0.16
PRKCSH-202ENST00000585540 CHST3Q7LGC8 479 aa16.05■□□□□ 0.16
PRKCSH-202ENST00000585540 FBXO11Q86XK2 927 aa16.05■□□□□ 0.16
PRKCSH-202ENST00000585540 TEX2Q8IWB9 1127 aa16.05■□□□□ 0.16
PRKCSH-202ENST00000585540 U2AF1L4Q8WU68 220 aaKnown RBP16.05■□□□□ 0.16
PRKCSH-202ENST00000585540 TINF2Q9BSI4 451 aa16.05■□□□□ 0.16
PRKCSH-202ENST00000585540 AMNQ9BXJ7 453 aa16.05■□□□□ 0.16
PRKCSH-202ENST00000585540 CRISPLD2Q9H0B8 497 aa16.05■□□□□ 0.16
PRKCSH-202ENST00000585540 UNC93B1Q9H1C4 597 aa16.05■□□□□ 0.16
PRKCSH-202ENST00000585540 CCDC196A0A1B0GTZ2 297 aa16.04■□□□□ 0.16
PRKCSH-202ENST00000585540 SEC24BO95487 1268 aa16.04■□□□□ 0.16
PRKCSH-202ENST00000585540 CYBAP13498 195 aa16.04■□□□□ 0.16
PRKCSH-202ENST00000585540 FGD1P98174 961 aa16.04■□□□□ 0.16
PRKCSH-202ENST00000585540 CCL14Q16627 93 aa16.04■□□□□ 0.16
PRKCSH-202ENST00000585540 FAM133AQ8N9E0 248 aa16.04■□□□□ 0.16
PRKCSH-202ENST00000585540 DNERQ8NFT8 737 aa16.04■□□□□ 0.16
PRKCSH-202ENST00000585540 NUP133Q8WUM0 1156 aa16.04■□□□□ 0.16
PRKCSH-202ENST00000585540 JAKMIP1Q96N16 626 aaKnown RBP16.04■□□□□ 0.16
PRKCSH-202ENST00000585540 AGXT2Q9BYV1 514 aa16.04■□□□□ 0.16
PRKCSH-202ENST00000585540 UBA5Q9GZZ9 404 aa16.04■□□□□ 0.16
PRKCSH-202ENST00000585540 JMJD4Q9H9V9 463 aa16.04■□□□□ 0.16
PRKCSH-202ENST00000585540 CYP39A1Q9NYL5 469 aa16.04■□□□□ 0.16
PRKCSH-202ENST00000585540 CNPY2Q9Y2B0 182 aa16.04■□□□□ 0.16
PRKCSH-202ENST00000585540 HTTP42858 3142 aa16.04■□□□□ 0.16
PRKCSH-202ENST00000585540 NID2Q14112 1375 aa16.03■□□□□ 0.16
PRKCSH-202ENST00000585540 RPS6KB1P23443 525 aa16.03■□□□□ 0.16
PRKCSH-202ENST00000585540 SLC4A3P48751 1232 aa16.03■□□□□ 0.16
PRKCSH-202ENST00000585540 GHRHRQ02643 423 aa16.03■□□□□ 0.16
PRKCSH-202ENST00000585540 QRICH1Q2TAL8 776 aa16.03■□□□□ 0.16
PRKCSH-202ENST00000585540 ADCK5Q3MIX3 580 aa16.03■□□□□ 0.16
PRKCSH-202ENST00000585540 APOA5Q6Q788 366 aa16.03■□□□□ 0.16
PRKCSH-202ENST00000585540 STAG2Q8N3U4 1231 aa16.03■□□□□ 0.16
PRKCSH-202ENST00000585540 HOMER2Q9NSB8 354 aa16.03■□□□□ 0.16
PRKCSH-202ENST00000585540 FLRT1Q9NZU1 646 aa16.03■□□□□ 0.16
PRKCSH-202ENST00000585540 PNMA6FA0A0J9YX94 578 aa16.02■□□□□ 0.16
PRKCSH-202ENST00000585540 POTEFA5A3E0 1075 aa16.02■□□□□ 0.16
PRKCSH-202ENST00000585540 SEPT4O43236 478 aa16.02■□□□□ 0.16
PRKCSH-202ENST00000585540 PGK2P07205 417 aa16.02■□□□□ 0.16
PRKCSH-202ENST00000585540 MLLT1Q03111 559 aaPredicted RBP16.02■□□□□ 0.16
PRKCSH-202ENST00000585540 RNF207Q6ZRF8 634 aa16.02■□□□□ 0.16
PRKCSH-202ENST00000585540 IL27Q8NEV9 243 aa16.02■□□□□ 0.16
PRKCSH-202ENST00000585540 CHMP4CQ96CF2 233 aa16.02■□□□□ 0.16
PRKCSH-202ENST00000585540 RRP36Q96EU6 259 aaKnown RBP16.02■□□□□ 0.16
PRKCSH-202ENST00000585540 IL17RAQ96F46 866 aa16.02■□□□□ 0.16
PRKCSH-202ENST00000585540 ABHD16BQ9H3Z7 469 aa16.02■□□□□ 0.16
PRKCSH-202ENST00000585540 RBM27Q9P2N5 1060 aaKnown RBP16.02■□□□□ 0.16
PRKCSH-202ENST00000585540 SEC63Q9UGP8 760 aaKnown RBP16.02■□□□□ 0.16
PRKCSH-202ENST00000585540 DDX20Q9UHI6 824 aaKnown RBP16.02■□□□□ 0.16
PRKCSH-202ENST00000585540 OGDHLQ9ULD0 1010 aa16.02■□□□□ 0.16
PRKCSH-202ENST00000585540 hCG_1984214I3L0E3 225 aa16.01■□□□□ 0.15
PRKCSH-202ENST00000585540 ZBTB43O43298 467 aa16.01■□□□□ 0.15
PRKCSH-202ENST00000585540 AKR1A1P14550 325 aa16.01■□□□□ 0.15
PRKCSH-202ENST00000585540 CASTP20810 708 aaKnown RBP16.01■□□□□ 0.15
PRKCSH-202ENST00000585540 MUM1L1Q5H9M0 696 aa16.01■□□□□ 0.15
PRKCSH-202ENST00000585540 NSMFQ6X4W1 530 aa16.01■□□□□ 0.15
PRKCSH-202ENST00000585540 RUFY3Q7L099 469 aa16.01■□□□□ 0.15
PRKCSH-202ENST00000585540 ZNF713Q8N859 430 aaPredicted RBP16.01■□□□□ 0.15
PRKCSH-202ENST00000585540 FANCBQ8NB91 859 aa16.01■□□□□ 0.15
PRKCSH-202ENST00000585540 MORC4Q8TE76 937 aa16.01■□□□□ 0.15
PRKCSH-202ENST00000585540 CLEC4DQ8WXI8 215 aa16.01■□□□□ 0.15
PRKCSH-202ENST00000585540 DEFB118Q96PH6 123 aa16.01■□□□□ 0.15
PRKCSH-202ENST00000585540 SENP2Q9HC62 589 aa16.01■□□□□ 0.15
PRKCSH-202ENST00000585540 ZSWIM6Q9HCJ5 1215 aa16.01■□□□□ 0.15
PRKCSH-202ENST00000585540 CYP46A1Q9Y6A2 500 aa16.01■□□□□ 0.15
PRKCSH-202ENST00000585540 CYP2C19P33261 490 aa16■□□□□ 0.15
PRKCSH-202ENST00000585540 TRIM32Q13049 653 aa16■□□□□ 0.15
PRKCSH-202ENST00000585540 MICU3Q86XE3 530 aa16■□□□□ 0.15
PRKCSH-202ENST00000585540 SHISA4Q96DD7 197 aa16■□□□□ 0.15
PRKCSH-202ENST00000585540 CDKN2AIPQ9NXV6 580 aaPredicted RBP16■□□□□ 0.15
PRKCSH-202ENST00000585540 FRMPD3Q5JV73 1810 aa16■□□□□ 0.15
PRKCSH-202ENST00000585540 PTPDC1A2A3K4 754 aa15.99■□□□□ 0.15
PRKCSH-202ENST00000585540 NFIBO00712 420 aa15.99■□□□□ 0.15
PRKCSH-202ENST00000585540 TFRCP02786 760 aaKnown RBP15.99■□□□□ 0.15
PRKCSH-202ENST00000585540 EN2P19622 333 aaPredicted RBP15.99■□□□□ 0.15
PRKCSH-202ENST00000585540 EVCP57679 992 aa15.99■□□□□ 0.15
PRKCSH-202ENST00000585540 SNAP25P60880 206 aa15.99■□□□□ 0.15
PRKCSH-202ENST00000585540 RPS6P62753 249 aaKnown RBP15.99■□□□□ 0.15
PRKCSH-202ENST00000585540 RTN1Q16799 776 aa15.99■□□□□ 0.15
PRKCSH-202ENST00000585540 USH1GQ495M9 461 aa15.99■□□□□ 0.15
PRKCSH-202ENST00000585540 Q6ZUG5 572 aa15.99■□□□□ 0.15
PRKCSH-202ENST00000585540 TMTC3Q6ZXV5 915 aa15.99■□□□□ 0.15
PRKCSH-202ENST00000585540 ARMCX2Q7L311 632 aa15.99■□□□□ 0.15
PRKCSH-202ENST00000585540 HTATIP2Q9BUP3 242 aa15.99■□□□□ 0.15
PRKCSH-202ENST00000585540 VTA1Q9NP79 307 aa15.99■□□□□ 0.15
PRKCSH-202ENST00000585540 KLF18A0A0U1RQI7 1052 aa15.98■□□□□ 0.15
PRKCSH-202ENST00000585540 GOLGA8AA7E2F4 631 aa15.98■□□□□ 0.15
PRKCSH-202ENST00000585540 GOLGA8BA8MQT2 603 aa15.98■□□□□ 0.15
PRKCSH-202ENST00000585540 CYTH3O43739 400 aa15.98■□□□□ 0.15
PRKCSH-202ENST00000585540 FARP2O94887 1054 aaPredicted RBP15.98■□□□□ 0.15
PRKCSH-202ENST00000585540 CNGA1P29973 690 aa15.98■□□□□ 0.15
PRKCSH-202ENST00000585540 CCND3P30281 292 aaPredicted RBP15.98■□□□□ 0.15
PRKCSH-202ENST00000585540 ALDH5A1P51649 535 aaPredicted RBP15.98■□□□□ 0.15
PRKCSH-202ENST00000585540 BAATQ14032 418 aaPredicted RBP15.98■□□□□ 0.15
PRKCSH-202ENST00000585540 ANKRD1Q15327 319 aa15.98■□□□□ 0.15
PRKCSH-202ENST00000585540 HOMER1Q86YM7 354 aa15.98■□□□□ 0.15
PRKCSH-202ENST00000585540 ARRDC4Q8NCT1 418 aa15.98■□□□□ 0.15
PRKCSH-202ENST00000585540 FGD4Q96M96 766 aa15.98■□□□□ 0.15
PRKCSH-202ENST00000585540 LRRC2Q9BYS8 371 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms