RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 GLT1D1Q96MS3 346 aa24.07■■□□□ 1.44
TOP3A-219ENST00000584887 ASGR1P07306 291 aa24.06■■□□□ 1.44
TOP3A-219ENST00000584887 CST5P28325 142 aaPredicted RBP24.06■■□□□ 1.44
TOP3A-219ENST00000584887 TNFAIP2Q03169 654 aa24.06■■□□□ 1.44
TOP3A-219ENST00000584887 CWC27Q6UX04 472 aaKnown RBP24.06■■□□□ 1.44
TOP3A-219ENST00000584887 KATNBL1Q9H079 304 aa24.06■■□□□ 1.44
TOP3A-219ENST00000584887 UPF3AQ9H1J1 476 aaKnown RBP24.06■■□□□ 1.44
TOP3A-219ENST00000584887 TCP11L1Q9NUJ3 509 aa24.06■■□□□ 1.44
TOP3A-219ENST00000584887 CYP39A1Q9NYL5 469 aa24.06■■□□□ 1.44
TOP3A-219ENST00000584887 KIAA0355O15063 1070 aa24.05■■□□□ 1.44
TOP3A-219ENST00000584887 ICAM1P05362 532 aa24.05■■□□□ 1.44
TOP3A-219ENST00000584887 ITGB8P26012 769 aa24.05■■□□□ 1.44
TOP3A-219ENST00000584887 GJA9P57773 515 aa24.05■■□□□ 1.44
TOP3A-219ENST00000584887 CCSAPQ6IQ19 270 aaPredicted RBP24.05■■□□□ 1.44
TOP3A-219ENST00000584887 EEPD1Q7L9B9 569 aa24.05■■□□□ 1.44
TOP3A-219ENST00000584887 FAM161BQ96MY7 647 aa24.05■■□□□ 1.44
TOP3A-219ENST00000584887 RANBP17Q9H2T7 1088 aaKnown RBP24.05■■□□□ 1.44
TOP3A-219ENST00000584887 RNF41Q9H4P4 317 aaPredicted RBP24.05■■□□□ 1.44
TOP3A-219ENST00000584887 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.04■■□□□ 1.44
TOP3A-219ENST00000584887 BEX3Q00994 111 aa24.04■■□□□ 1.44
TOP3A-219ENST00000584887 PURBQ96QR8 312 aaKnown RBP24.04■■□□□ 1.44
TOP3A-219ENST00000584887 NEDD4P46934 1319 aa24.04■■□□□ 1.44
TOP3A-219ENST00000584887 PCP11498 1178 aaKnown RBP24.03■■□□□ 1.44
TOP3A-219ENST00000584887 FAAP100Q0VG06 881 aa24.03■■□□□ 1.44
TOP3A-219ENST00000584887 BTNL9Q6UXG8 535 aa24.03■■□□□ 1.44
TOP3A-219ENST00000584887 ANKRD33Q7Z3H0 272 aa24.03■■□□□ 1.44
TOP3A-219ENST00000584887 FBXO16Q8IX29 292 aaPredicted RBP24.03■■□□□ 1.44
TOP3A-219ENST00000584887 ESR2Q92731 530 aa24.03■■□□□ 1.44
TOP3A-219ENST00000584887 ZKSCAN3Q9BRR0 538 aa24.03■■□□□ 1.44
TOP3A-219ENST00000584887 STXBP5LQ9Y2K9 1186 aa24.03■■□□□ 1.44
TOP3A-219ENST00000584887 ASTN1O14525 1302 aa24.03■■□□□ 1.44
TOP3A-219ENST00000584887 ELP1O95163 1332 aa24.03■■□□□ 1.44
TOP3A-219ENST00000584887 A0A0U1RQG5 324 aaPredicted RBP24.02■■□□□ 1.44
TOP3A-219ENST00000584887 PTPDC1A2A3K4 754 aa24.02■■□□□ 1.44
TOP3A-219ENST00000584887 ZNF213O14771 459 aa24.02■■□□□ 1.44
TOP3A-219ENST00000584887 PDHBP11177 359 aa24.02■■□□□ 1.44
TOP3A-219ENST00000584887 FPGSQ05932 587 aa24.02■■□□□ 1.44
TOP3A-219ENST00000584887 BAATQ14032 418 aaPredicted RBP24.02■■□□□ 1.44
TOP3A-219ENST00000584887 ZNF697Q5TEC3 545 aa24.02■■□□□ 1.44
TOP3A-219ENST00000584887 TLK2Q86UE8 772 aa24.02■■□□□ 1.44
TOP3A-219ENST00000584887 RNPC3Q96LT9 517 aaKnown RBP24.02■■□□□ 1.44
TOP3A-219ENST00000584887 TOX2Q96NM4 488 aa24.02■■□□□ 1.44
TOP3A-219ENST00000584887 AP5M1Q9H0R1 490 aa24.02■■□□□ 1.44
TOP3A-219ENST00000584887 OSBPL3Q9H4L5 887 aa24.02■■□□□ 1.44
TOP3A-219ENST00000584887 NFIBO00712 420 aa24.01■■□□□ 1.43
TOP3A-219ENST00000584887 PTGS1P23219 599 aa24.01■■□□□ 1.43
TOP3A-219ENST00000584887 EPHB4P54760 987 aa24.01■■□□□ 1.43
TOP3A-219ENST00000584887 PDGFCQ9NRA1 345 aa24.01■■□□□ 1.43
TOP3A-219ENST00000584887 MROH7Q68CQ1 1323 aa24.01■■□□□ 1.43
TOP3A-219ENST00000584887 HIP1O00291 1037 aa24■■□□□ 1.43
TOP3A-219ENST00000584887 DYNC1LI2O43237 492 aaPredicted RBP24■■□□□ 1.43
TOP3A-219ENST00000584887 ZNF543Q08ER8 600 aa24■■□□□ 1.43
TOP3A-219ENST00000584887 TTC14Q96N46 770 aa24■■□□□ 1.43
TOP3A-219ENST00000584887 LRRC37A2A6NM11 1700 aa23.99■■□□□ 1.43
TOP3A-219ENST00000584887 ARVCFO00192 962 aa23.99■■□□□ 1.43
TOP3A-219ENST00000584887 CTAGE5O15320 804 aa23.99■■□□□ 1.43
TOP3A-219ENST00000584887 SMPD1P17405 629 aa23.99■■□□□ 1.43
TOP3A-219ENST00000584887 CALML3P27482 149 aa23.99■■□□□ 1.43
TOP3A-219ENST00000584887 FSCN1Q16658 493 aaKnown RBP23.99■■□□□ 1.43
TOP3A-219ENST00000584887 FAM109BQ6ICB4 259 aaPredicted RBP23.99■■□□□ 1.43
TOP3A-219ENST00000584887 CXCL17Q6UXB2 119 aa23.99■■□□□ 1.43
TOP3A-219ENST00000584887 ADD3Q9UEY8 706 aaKnown RBP23.99■■□□□ 1.43
TOP3A-219ENST00000584887 KDM4AO75164 1064 aa23.98■■□□□ 1.43
TOP3A-219ENST00000584887 GOLGA8HP0CJ92 632 aa23.98■■□□□ 1.43
TOP3A-219ENST00000584887 SLC30A10Q6XR72 485 aa23.98■■□□□ 1.43
TOP3A-219ENST00000584887 KIAA1211Q6ZU35 1233 aa23.98■■□□□ 1.43
TOP3A-219ENST00000584887 VTA1Q9NP79 307 aa23.98■■□□□ 1.43
TOP3A-219ENST00000584887 TBX21Q9UL17 535 aa23.98■■□□□ 1.43
TOP3A-219ENST00000584887 GNEQ9Y223 722 aaKnown RBP23.98■■□□□ 1.43
TOP3A-219ENST00000584887 LCTP09848 1927 aa23.98■■□□□ 1.43
TOP3A-219ENST00000584887 B4E1Z4 1266 aa23.97■■□□□ 1.43
TOP3A-219ENST00000584887 TLR3O15455 904 aaKnown RBP23.97■■□□□ 1.43
TOP3A-219ENST00000584887 CDK7P50613 346 aa23.97■■□□□ 1.43
TOP3A-219ENST00000584887 ALDH5A1P51649 535 aaPredicted RBP23.97■■□□□ 1.43
TOP3A-219ENST00000584887 IQSEC1Q6DN90 963 aa23.97■■□□□ 1.43
TOP3A-219ENST00000584887 IQCA1Q86XH1 822 aa23.97■■□□□ 1.43
TOP3A-219ENST00000584887 GUCD1Q96NT3 240 aa23.97■■□□□ 1.43
TOP3A-219ENST00000584887 PPP1R12CQ9BZL4 782 aa23.97■■□□□ 1.43
TOP3A-219ENST00000584887 LAMA4Q16363 1823 aa23.96■■□□□ 1.43
TOP3A-219ENST00000584887 ZEB2O60315 1214 aa23.96■■□□□ 1.43
TOP3A-219ENST00000584887 TIMP1P01033 207 aa23.96■■□□□ 1.43
TOP3A-219ENST00000584887 IMMTQ16891 758 aaKnown RBP23.96■■□□□ 1.43
TOP3A-219ENST00000584887 USH1GQ495M9 461 aa23.96■■□□□ 1.43
TOP3A-219ENST00000584887 TMEM63BQ5T3F8 832 aa23.96■■□□□ 1.43
TOP3A-219ENST00000584887 TAPT1Q6NXT6 567 aa23.96■■□□□ 1.43
TOP3A-219ENST00000584887 RNF207Q6ZRF8 634 aa23.96■■□□□ 1.43
TOP3A-219ENST00000584887 CPVLQ9H3G5 476 aa23.96■■□□□ 1.43
TOP3A-219ENST00000584887 KAT14Q9H8E8 782 aa23.96■■□□□ 1.43
TOP3A-219ENST00000584887 PNMA2Q9UL42 364 aa23.96■■□□□ 1.43
TOP3A-219ENST00000584887 SUPT16HQ9Y5B9 1047 aaKnown RBP23.96■■□□□ 1.43
TOP3A-219ENST00000584887 SNHG28P0DPA3 235 aa23.95■■□□□ 1.42
TOP3A-219ENST00000584887 NKX3-2P78367 333 aa23.95■■□□□ 1.42
TOP3A-219ENST00000584887 SMAD3P84022 425 aaKnown RBP23.95■■□□□ 1.42
TOP3A-219ENST00000584887 CCDC178Q5BJE1 867 aa23.95■■□□□ 1.42
TOP3A-219ENST00000584887 GPATCH4Q5T3I0 446 aaKnown RBP23.95■■□□□ 1.42
TOP3A-219ENST00000584887 DGKHQ86XP1 1220 aa23.95■■□□□ 1.42
TOP3A-219ENST00000584887 FAM126BQ8IXS8 530 aa23.95■■□□□ 1.42
TOP3A-219ENST00000584887 PNMA1Q8ND90 353 aa23.95■■□□□ 1.42
TOP3A-219ENST00000584887 CLEC4DQ8WXI8 215 aa23.95■■□□□ 1.42
TOP3A-219ENST00000584887 DSCC1Q9BVC3 393 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms