RNA–Protein interactions for RNA: ENST00000584620.5

PGAP3-209, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 804 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-209ENST00000584620 FBXO40Q9UH90 709 aa12.84□□□□□ -0.35
PGAP3-209ENST00000584620 YBX2Q9Y2T7 364 aaKnown RBP12.84□□□□□ -0.35
PGAP3-209ENST00000584620 CTDP1Q9Y5B0 961 aaPredicted RBP12.84□□□□□ -0.35
PGAP3-209ENST00000584620 GBF1Q92538 1859 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 CTAGE5O15320 804 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 GPR37L1O60883 481 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 SLC3A2P08195 630 aaKnown RBP12.83□□□□□ -0.36
PGAP3-209ENST00000584620 CSF2RAP15509 400 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 CST5P28325 142 aaPredicted RBP12.83□□□□□ -0.36
PGAP3-209ENST00000584620 MRE11P49959 708 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 STAT2P52630 851 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 AAK1Q2M2I8 961 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 CCDC144BQ3MJ40 725 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 ANKRD45Q5TZF3 282 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 MFSD5Q6N075 450 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 ARMCX2Q7L311 632 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 CCDC144CPQ8IYA2 1237 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 FAM133AQ8N9E0 248 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 STAG1Q8WVM7 1258 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 CRBNQ96SW2 442 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 UPF3AQ9H1J1 476 aaKnown RBP12.83□□□□□ -0.36
PGAP3-209ENST00000584620 ABHD16BQ9H3Z7 469 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 SLC28A3Q9HAS3 691 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 A1CFQ9NQ94 594 aaKnown RBP12.83□□□□□ -0.36
PGAP3-209ENST00000584620 HOMER2Q9NSB8 354 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 ANAPC4Q9UJX5 808 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 ASTN1O14525 1302 aa12.83□□□□□ -0.36
PGAP3-209ENST00000584620 ZNFX1Q9P2E3 1918 aaKnown RBP12.82□□□□□ -0.36
PGAP3-209ENST00000584620 SOWAHBA6NEL2 793 aa12.82□□□□□ -0.36
PGAP3-209ENST00000584620 MOXD2PA6NHM9 499 aa12.82□□□□□ -0.36
PGAP3-209ENST00000584620 PLA2G6O60733 806 aa12.82□□□□□ -0.36
PGAP3-209ENST00000584620 FGRP09769 529 aa12.82□□□□□ -0.36
PGAP3-209ENST00000584620 FDX1P10109 184 aa12.82□□□□□ -0.36
PGAP3-209ENST00000584620 SLC1A4P43007 532 aa12.82□□□□□ -0.36
PGAP3-209ENST00000584620 CDK7P50613 346 aa12.82□□□□□ -0.36
PGAP3-209ENST00000584620 GJA9P57773 515 aa12.82□□□□□ -0.36
PGAP3-209ENST00000584620 SNAP25P60880 206 aa12.82□□□□□ -0.36
PGAP3-209ENST00000584620 PPIGQ13427 754 aaKnown RBP eCLIP12.82□□□□□ -0.36
PGAP3-209ENST00000584620 RAB30Q15771 203 aa12.82□□□□□ -0.36
PGAP3-209ENST00000584620 KCTD1Q719H9 257 aa12.82□□□□□ -0.36
PGAP3-209ENST00000584620 FAM160B2Q86V87 743 aa12.82□□□□□ -0.36
PGAP3-209ENST00000584620 CHURC1Q8WUH1 139 aa12.82□□□□□ -0.36
PGAP3-209ENST00000584620 TOX2Q96NM4 488 aa12.82□□□□□ -0.36
PGAP3-209ENST00000584620 STARD7Q9NQZ5 370 aa12.82□□□□□ -0.36
PGAP3-209ENST00000584620 STX8Q9UNK0 236 aa12.82□□□□□ -0.36
PGAP3-209ENST00000584620 DDX49Q9Y6V7 483 aaKnown RBP12.82□□□□□ -0.36
PGAP3-209ENST00000584620 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.81□□□□□ -0.36
PGAP3-209ENST00000584620 TSPY2A6NKD2 308 aa12.81□□□□□ -0.36
PGAP3-209ENST00000584620 ASGR1P07306 291 aa12.81□□□□□ -0.36
PGAP3-209ENST00000584620 RABGGTBP53611 331 aa12.81□□□□□ -0.36
PGAP3-209ENST00000584620 PDE1AP54750 535 aa12.81□□□□□ -0.36
PGAP3-209ENST00000584620 NKX3-2P78367 333 aa12.81□□□□□ -0.36
PGAP3-209ENST00000584620 ALX1Q15699 326 aa12.81□□□□□ -0.36
PGAP3-209ENST00000584620 RCSD1Q6JBY9 416 aa12.81□□□□□ -0.36
PGAP3-209ENST00000584620 NUP133Q8WUM0 1156 aa12.81□□□□□ -0.36
PGAP3-209ENST00000584620 EVI5LQ96CN4 794 aa12.81□□□□□ -0.36
PGAP3-209ENST00000584620 FAM227BQ96M60 508 aa12.81□□□□□ -0.36
PGAP3-209ENST00000584620 PPP1R12CQ9BZL4 782 aa12.81□□□□□ -0.36
PGAP3-209ENST00000584620 ACAD9Q9H845 621 aa12.81□□□□□ -0.36
PGAP3-209ENST00000584620 RNF146Q9NTX7 359 aa12.81□□□□□ -0.36
PGAP3-209ENST00000584620 TBX21Q9UL17 535 aa12.81□□□□□ -0.36
PGAP3-209ENST00000584620 PRR12Q9ULL5 1215 aa12.81□□□□□ -0.36
PGAP3-209ENST00000584620 ELP1O95163 1332 aa12.81□□□□□ -0.36
PGAP3-209ENST00000584620 PRRC2BQ5JSZ5 2229 aaKnown RBP12.81□□□□□ -0.36
PGAP3-209ENST00000584620 A0A0D9SFI3 127 aa12.8□□□□□ -0.36
PGAP3-209ENST00000584620 RFXAPO00287 272 aa12.8□□□□□ -0.36
PGAP3-209ENST00000584620 TLL1O43897 1013 aa12.8□□□□□ -0.36
PGAP3-209ENST00000584620 ORC4O43929 436 aa12.8□□□□□ -0.36
PGAP3-209ENST00000584620 FGAP02671 866 aa12.8□□□□□ -0.36
PGAP3-209ENST00000584620 C6orf222P0C671 652 aaPredicted RBP12.8□□□□□ -0.36
PGAP3-209ENST00000584620 MYOGP15173 224 aa12.8□□□□□ -0.36
PGAP3-209ENST00000584620 PTGS1P23219 599 aa12.8□□□□□ -0.36
PGAP3-209ENST00000584620 IKQ13123 557 aaPredicted RBP12.8□□□□□ -0.36
PGAP3-209ENST00000584620 HDAC1Q13547 482 aaPredicted RBP12.8□□□□□ -0.36
PGAP3-209ENST00000584620 TKFCQ3LXA3 575 aa12.8□□□□□ -0.36
PGAP3-209ENST00000584620 MUM1L1Q5H9M0 696 aa12.8□□□□□ -0.36
PGAP3-209ENST00000584620 CCDC174Q6PII3 467 aa12.8□□□□□ -0.36
PGAP3-209ENST00000584620 TRERF1Q96PN7 1200 aa12.8□□□□□ -0.36
PGAP3-209ENST00000584620 HELLSQ9NRZ9 838 aa12.8□□□□□ -0.36
PGAP3-209ENST00000584620 ISY1Q9ULR0 285 aaKnown RBP12.8□□□□□ -0.36
PGAP3-209ENST00000584620 RANBP6O60518 1105 aaKnown RBP12.79□□□□□ -0.36
PGAP3-209ENST00000584620 ALAS1P13196 640 aa12.79□□□□□ -0.36
PGAP3-209ENST00000584620 GNASQ5JWF2 1037 aa12.79□□□□□ -0.36
PGAP3-209ENST00000584620 PPP4R3BQ5MIZ7 849 aa12.79□□□□□ -0.36
PGAP3-209ENST00000584620 KRT40Q6A162 431 aa12.79□□□□□ -0.36
PGAP3-209ENST00000584620 TTBK2Q6IQ55 1244 aa12.79□□□□□ -0.36
PGAP3-209ENST00000584620 ZNF589Q86UQ0 364 aaPredicted RBP12.79□□□□□ -0.36
PGAP3-209ENST00000584620 TMEM199Q8N511 208 aa12.79□□□□□ -0.36
PGAP3-209ENST00000584620 PCSK9Q8NBP7 692 aaKnown RBP12.79□□□□□ -0.36
PGAP3-209ENST00000584620 HERVK_113Q902F9 699 aa12.79□□□□□ -0.36
PGAP3-209ENST00000584620 GLT1D1Q96MS3 346 aa12.79□□□□□ -0.36
PGAP3-209ENST00000584620 PURBQ96QR8 312 aaKnown RBP12.79□□□□□ -0.36
PGAP3-209ENST00000584620 CYP39A1Q9NYL5 469 aa12.79□□□□□ -0.36
PGAP3-209ENST00000584620 GNEQ9Y223 722 aaKnown RBP12.79□□□□□ -0.36
PGAP3-209ENST00000584620 ARVCFO00192 962 aa12.78□□□□□ -0.36
PGAP3-209ENST00000584620 BEX3Q00994 111 aa12.78□□□□□ -0.36
PGAP3-209ENST00000584620 TNFAIP2Q03169 654 aa12.78□□□□□ -0.36
PGAP3-209ENST00000584620 MCMDC2Q4G0Z9 681 aa12.78□□□□□ -0.36
PGAP3-209ENST00000584620 TMEM63BQ5T3F8 832 aa12.78□□□□□ -0.36
PGAP3-209ENST00000584620 PPP2R2DQ66LE6 453 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms