RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 SLC25A27O95847 323 aa21.08■□□□□ 0.97
RFFL-211ENST00000584541 FOSBP53539 338 aa21.08■□□□□ 0.97
RFFL-211ENST00000584541 FAM110CQ1W6H9 321 aa21.08■□□□□ 0.97
RFFL-211ENST00000584541 LARP1BQ659C4 914 aaKnown RBP21.08■□□□□ 0.97
RFFL-211ENST00000584541 RIOX2Q8IUF8 465 aa21.08■□□□□ 0.97
RFFL-211ENST00000584541 TXNRD2Q9NNW7 524 aa21.08■□□□□ 0.97
RFFL-211ENST00000584541 CPA4Q9UI42 421 aa21.08■□□□□ 0.97
RFFL-211ENST00000584541 ADGRA2Q96PE1 1338 aa21.07■□□□□ 0.96
RFFL-211ENST00000584541 H3BQV1 296 aa21.07■□□□□ 0.96
RFFL-211ENST00000584541 PDIA4P13667 645 aaKnown RBP21.07■□□□□ 0.96
RFFL-211ENST00000584541 NLRP5P59047 1200 aa21.07■□□□□ 0.96
RFFL-211ENST00000584541 MAP2K1Q02750 393 aaPredicted RBP21.07■□□□□ 0.96
RFFL-211ENST00000584541 POTEEQ6S8J3 1075 aa21.07■□□□□ 0.96
RFFL-211ENST00000584541 CCAR1Q8IX12 1150 aaKnown RBP21.07■□□□□ 0.96
RFFL-211ENST00000584541 TRERF1Q96PN7 1200 aa21.07■□□□□ 0.96
RFFL-211ENST00000584541 GLT8D2Q9H1C3 349 aa21.07■□□□□ 0.96
RFFL-211ENST00000584541 RNF146Q9NTX7 359 aa21.07■□□□□ 0.96
RFFL-211ENST00000584541 CALML3P27482 149 aa21.06■□□□□ 0.96
RFFL-211ENST00000584541 GNA11P29992 359 aa21.06■□□□□ 0.96
RFFL-211ENST00000584541 NCAPG2Q86XI2 1143 aa21.06■□□□□ 0.96
RFFL-211ENST00000584541 RGS22Q8NE09 1264 aa21.06■□□□□ 0.96
RFFL-211ENST00000584541 CHST13Q8NET6 341 aa21.06■□□□□ 0.96
RFFL-211ENST00000584541 BEGAINQ9BUH8 593 aa21.06■□□□□ 0.96
RFFL-211ENST00000584541 MOV10L1Q9BXT6 1211 aaKnown RBP21.06■□□□□ 0.96
RFFL-211ENST00000584541 C6orf50Q9HD87 102 aa21.06■□□□□ 0.96
RFFL-211ENST00000584541 HOMER2Q9NSB8 354 aa21.06■□□□□ 0.96
RFFL-211ENST00000584541 RNF186Q9NXI6 227 aa21.06■□□□□ 0.96
RFFL-211ENST00000584541 FBXO40Q9UH90 709 aa21.06■□□□□ 0.96
RFFL-211ENST00000584541 ESYT2A0FGR8 921 aa21.05■□□□□ 0.96
RFFL-211ENST00000584541 SMCO2A6NFE2 343 aa21.05■□□□□ 0.96
RFFL-211ENST00000584541 PEX10O60683 326 aa21.05■□□□□ 0.96
RFFL-211ENST00000584541 TRPA1O75762 1119 aa21.05■□□□□ 0.96
RFFL-211ENST00000584541 BCRP11274 1271 aa21.05■□□□□ 0.96
RFFL-211ENST00000584541 ADCY7P51828 1080 aa21.05■□□□□ 0.96
RFFL-211ENST00000584541 SAFBQ15424 915 aaKnown RBP eCLIP21.05■□□□□ 0.96
RFFL-211ENST00000584541 Q3C1V9 767 aa21.05■□□□□ 0.96
RFFL-211ENST00000584541 GALNT17Q6IS24 598 aa21.05■□□□□ 0.96
RFFL-211ENST00000584541 C17orf99Q6UX52 265 aa21.05■□□□□ 0.96
RFFL-211ENST00000584541 MCF2L2Q86YR7 1114 aa21.05■□□□□ 0.96
RFFL-211ENST00000584541 SHCBP1Q8NEM2 672 aa21.05■□□□□ 0.96
RFFL-211ENST00000584541 BICD2Q8TD16 824 aa21.05■□□□□ 0.96
RFFL-211ENST00000584541 CUL5Q93034 780 aa21.05■□□□□ 0.96
RFFL-211ENST00000584541 CFHR5Q9BXR6 569 aa21.05■□□□□ 0.96
RFFL-211ENST00000584541 MROH8Q9H579 483 aa21.05■□□□□ 0.96
RFFL-211ENST00000584541 ACAD9Q9H845 621 aa21.05■□□□□ 0.96
RFFL-211ENST00000584541 BRMS1Q9HCU9 246 aa21.05■□□□□ 0.96
RFFL-211ENST00000584541 RIPK3Q9Y572 518 aa21.05■□□□□ 0.96
RFFL-211ENST00000584541 TAL1P17542 331 aaPredicted RBP21.04■□□□□ 0.96
RFFL-211ENST00000584541 MRPL12P52815 198 aaKnown RBP21.04■□□□□ 0.96
RFFL-211ENST00000584541 KRT40Q6A162 431 aa21.04■□□□□ 0.96
RFFL-211ENST00000584541 TYW1BQ6NUM6 668 aa21.04■□□□□ 0.96
RFFL-211ENST00000584541 FBXO18Q8NFZ0 1043 aa21.04■□□□□ 0.96
RFFL-211ENST00000584541 PHF20Q9BVI0 1012 aa21.04■□□□□ 0.96
RFFL-211ENST00000584541 ZMYND12Q9H0C1 365 aa21.04■□□□□ 0.96
RFFL-211ENST00000584541 PSTPIP2Q9H939 334 aa21.04■□□□□ 0.96
RFFL-211ENST00000584541 SAGE1Q9NXZ1 904 aa21.04■□□□□ 0.96
RFFL-211ENST00000584541 PLXNB2O15031 1838 aa21.04■□□□□ 0.96
RFFL-211ENST00000584541 MGAMO43451 1857 aa21.03■□□□□ 0.96
RFFL-211ENST00000584541 TBC1D8O95759 1140 aa21.03■□□□□ 0.96
RFFL-211ENST00000584541 ERCC3P19447 782 aa21.03■□□□□ 0.96
RFFL-211ENST00000584541 SYT1P21579 422 aa21.03■□□□□ 0.96
RFFL-211ENST00000584541 GUCY1B3Q02153 619 aa21.03■□□□□ 0.96
RFFL-211ENST00000584541 WDR78Q5VTH9 848 aa21.03■□□□□ 0.96
RFFL-211ENST00000584541 TEX2Q8IWB9 1127 aa21.03■□□□□ 0.96
RFFL-211ENST00000584541 SAMD3Q8N6K7 520 aa21.03■□□□□ 0.96
RFFL-211ENST00000584541 MAF1Q9H063 256 aa21.03■□□□□ 0.96
RFFL-211ENST00000584541 RIC8AQ9NPQ8 531 aa21.03■□□□□ 0.96
RFFL-211ENST00000584541 GJB4Q9NTQ9 266 aa21.03■□□□□ 0.96
RFFL-211ENST00000584541 KCNJ14Q9UNX9 436 aa21.03■□□□□ 0.96
RFFL-211ENST00000584541 VPS37CA5D8V6 355 aaPredicted RBP21.02■□□□□ 0.96
RFFL-211ENST00000584541 MMP1P03956 469 aa21.02■□□□□ 0.96
RFFL-211ENST00000584541 MAPK4P31152 587 aa21.02■□□□□ 0.96
RFFL-211ENST00000584541 MUM1L1Q5H9M0 696 aa21.02■□□□□ 0.96
RFFL-211ENST00000584541 CLEC4DQ8WXI8 215 aa21.02■□□□□ 0.96
RFFL-211ENST00000584541 MAP3K20Q9NYL2 800 aaKnown RBP21.02■□□□□ 0.96
RFFL-211ENST00000584541 PCDHA4Q9UN74 947 aa21.02■□□□□ 0.96
RFFL-211ENST00000584541 ZNFX1Q9P2E3 1918 aaKnown RBP21.02■□□□□ 0.95
RFFL-211ENST00000584541 GCOM1H8Y6P7 765 aaPredicted RBP21.01■□□□□ 0.95
RFFL-211ENST00000584541 NFIBO00712 420 aa21.01■□□□□ 0.95
RFFL-211ENST00000584541 STX6O43752 255 aa21.01■□□□□ 0.95
RFFL-211ENST00000584541 CFBP00751 764 aa21.01■□□□□ 0.95
RFFL-211ENST00000584541 POLR2MP0CAP2 368 aa21.01■□□□□ 0.95
RFFL-211ENST00000584541 KRT2P35908 639 aa21.01■□□□□ 0.95
RFFL-211ENST00000584541 GNL2Q13823 731 aaKnown RBP21.01■□□□□ 0.95
RFFL-211ENST00000584541 NSMFQ6X4W1 530 aa21.01■□□□□ 0.95
RFFL-211ENST00000584541 BLIDQ8IZY5 108 aa21.01■□□□□ 0.95
RFFL-211ENST00000584541 DNAJC5GQ8N7S2 189 aa21.01■□□□□ 0.95
RFFL-211ENST00000584541 DAGLBQ8NCG7 672 aa21.01■□□□□ 0.95
RFFL-211ENST00000584541 IVNS1ABPQ9Y6Y0 642 aa21.01■□□□□ 0.95
RFFL-211ENST00000584541 MCTP2Q6DN12 878 aa21■□□□□ 0.95
RFFL-211ENST00000584541 RNF207Q6ZRF8 634 aa21■□□□□ 0.95
RFFL-211ENST00000584541 REXO1Q8N1G1 1221 aaKnown RBP21■□□□□ 0.95
RFFL-211ENST00000584541 ANKRD35Q8N283 1001 aa21■□□□□ 0.95
RFFL-211ENST00000584541 SHISA4Q96DD7 197 aa21■□□□□ 0.95
RFFL-211ENST00000584541 PORCNQ9H237 461 aa21■□□□□ 0.95
RFFL-211ENST00000584541 EFCC1Q9HA90 598 aa21■□□□□ 0.95
RFFL-211ENST00000584541 PFASO15067 1338 aa21■□□□□ 0.95
RFFL-211ENST00000584541 PIK3CDO00329 1044 aa20.99■□□□□ 0.95
RFFL-211ENST00000584541 OPLAHO14841 1288 aa20.99■□□□□ 0.95
RFFL-211ENST00000584541 FCER1AP12319 257 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms