RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 BMP3P12645 472 aa14.67□□□□□ -0.06
TOP3A-215ENST00000583328 SMPD1P17405 629 aa14.67□□□□□ -0.06
TOP3A-215ENST00000583328 KCNQ1P51787 676 aa14.67□□□□□ -0.06
TOP3A-215ENST00000583328 PSMC6P62333 389 aa14.67□□□□□ -0.06
TOP3A-215ENST00000583328 TMEM67Q5HYA8 995 aa14.67□□□□□ -0.06
TOP3A-215ENST00000583328 SLFN13Q68D06 897 aa14.67□□□□□ -0.06
TOP3A-215ENST00000583328 IQSEC1Q6DN90 963 aa14.67□□□□□ -0.06
TOP3A-215ENST00000583328 GIMAP6Q6P9H5 292 aa14.67□□□□□ -0.06
TOP3A-215ENST00000583328 LRRC47Q8N1G4 583 aaKnown RBP14.67□□□□□ -0.06
TOP3A-215ENST00000583328 CEP95Q96GE4 821 aa14.67□□□□□ -0.06
TOP3A-215ENST00000583328 ZNF287Q9HBT7 754 aa14.67□□□□□ -0.06
TOP3A-215ENST00000583328 A1CFQ9NQ94 594 aaKnown RBP14.67□□□□□ -0.06
TOP3A-215ENST00000583328 MTMR4Q9NYA4 1195 aa14.67□□□□□ -0.06
TOP3A-215ENST00000583328 TMEM232C9JQI7 657 aa14.66□□□□□ -0.06
TOP3A-215ENST00000583328 PRDM1O75626 825 aa14.66□□□□□ -0.06
TOP3A-215ENST00000583328 TTLL1O95922 423 aa14.66□□□□□ -0.06
TOP3A-215ENST00000583328 PTGS1P23219 599 aa14.66□□□□□ -0.06
TOP3A-215ENST00000583328 IKQ13123 557 aaPredicted RBP14.66□□□□□ -0.06
TOP3A-215ENST00000583328 EEPD1Q7L9B9 569 aa14.66□□□□□ -0.06
TOP3A-215ENST00000583328 AGBL1Q96MI9 1066 aa14.66□□□□□ -0.06
TOP3A-215ENST00000583328 CERS4Q9HA82 394 aa14.66□□□□□ -0.06
TOP3A-215ENST00000583328 PDGFCQ9NRA1 345 aa14.66□□□□□ -0.06
TOP3A-215ENST00000583328 RNF146Q9NTX7 359 aa14.66□□□□□ -0.06
TOP3A-215ENST00000583328 Q9Y3F1 56 aa14.66□□□□□ -0.06
TOP3A-215ENST00000583328 BAZ2AQ9UIF9 1905 aaKnown RBP14.66□□□□□ -0.06
TOP3A-215ENST00000583328 PFKMP08237 780 aa14.65□□□□□ -0.06
TOP3A-215ENST00000583328 SUPT20HL2P0C7V6 817 aa14.65□□□□□ -0.06
TOP3A-215ENST00000583328 HOXD11P31277 338 aaPredicted RBP14.65□□□□□ -0.06
TOP3A-215ENST00000583328 TTLL4Q14679 1199 aa14.65□□□□□ -0.06
TOP3A-215ENST00000583328 TKFCQ3LXA3 575 aa14.65□□□□□ -0.06
TOP3A-215ENST00000583328 KIAA1211Q6ZU35 1233 aa14.65□□□□□ -0.06
TOP3A-215ENST00000583328 DEFB128Q7Z7B8 93 aa14.65□□□□□ -0.06
TOP3A-215ENST00000583328 SIRT2Q8IXJ6 389 aa14.65□□□□□ -0.06
TOP3A-215ENST00000583328 GMCL1P1Q8NEA9 526 aa14.65□□□□□ -0.06
TOP3A-215ENST00000583328 CHURC1Q8WUH1 139 aa14.65□□□□□ -0.06
TOP3A-215ENST00000583328 TRERF1Q96PN7 1200 aa14.65□□□□□ -0.06
TOP3A-215ENST00000583328 ALDH8A1Q9H2A2 487 aaPredicted RBP14.65□□□□□ -0.06
TOP3A-215ENST00000583328 EPHX3Q9H6B9 360 aa14.65□□□□□ -0.06
TOP3A-215ENST00000583328 SYNPO2Q9UMS6 1093 aa14.65□□□□□ -0.06
TOP3A-215ENST00000583328 HCN4Q9Y3Q4 1203 aa14.65□□□□□ -0.06
TOP3A-215ENST00000583328 MTCH2Q9Y6C9 303 aa14.65□□□□□ -0.06
TOP3A-215ENST00000583328 MYH8P13535 1937 aa14.64□□□□□ -0.07
TOP3A-215ENST00000583328 APPP05067 770 aa14.64□□□□□ -0.07
TOP3A-215ENST00000583328 CA3P07451 260 aa14.64□□□□□ -0.07
TOP3A-215ENST00000583328 CYP2C9P11712 490 aa14.64□□□□□ -0.07
TOP3A-215ENST00000583328 ACTN1P12814 892 aa14.64□□□□□ -0.07
TOP3A-215ENST00000583328 ALAS1P13196 640 aa14.64□□□□□ -0.07
TOP3A-215ENST00000583328 POU3F3P20264 500 aaPredicted RBP14.64□□□□□ -0.07
TOP3A-215ENST00000583328 TDO2P48775 406 aa14.64□□□□□ -0.07
TOP3A-215ENST00000583328 STAT2P52630 851 aa14.64□□□□□ -0.07
TOP3A-215ENST00000583328 TAPT1Q6NXT6 567 aa14.64□□□□□ -0.07
TOP3A-215ENST00000583328 FAM160B2Q86V87 743 aa14.64□□□□□ -0.07
TOP3A-215ENST00000583328 FBXO16Q8IX29 292 aaPredicted RBP14.64□□□□□ -0.07
TOP3A-215ENST00000583328 STAG1Q8WVM7 1258 aa14.64□□□□□ -0.07
TOP3A-215ENST00000583328 CHMP4CQ96CF2 233 aa14.64□□□□□ -0.07
TOP3A-215ENST00000583328 VWCEQ96DN2 955 aa14.64□□□□□ -0.07
TOP3A-215ENST00000583328 LRFN3Q9BTN0 628 aa14.64□□□□□ -0.07
TOP3A-215ENST00000583328 COG5Q9UP83 839 aa14.64□□□□□ -0.07
TOP3A-215ENST00000583328 DDX49Q9Y6V7 483 aaKnown RBP14.64□□□□□ -0.07
TOP3A-215ENST00000583328 TSPY3P0CV98 308 aa14.63□□□□□ -0.07
TOP3A-215ENST00000583328 TSPY8P0CW00 308 aa14.63□□□□□ -0.07
TOP3A-215ENST00000583328 MS4A1P11836 297 aa14.63□□□□□ -0.07
TOP3A-215ENST00000583328 SLC1A4P43007 532 aa14.63□□□□□ -0.07
TOP3A-215ENST00000583328 TMEM63BQ5T3F8 832 aa14.63□□□□□ -0.07
TOP3A-215ENST00000583328 ARNTL2Q8WYA1 636 aa14.63□□□□□ -0.07
TOP3A-215ENST00000583328 OSBP2Q969R2 916 aa14.63□□□□□ -0.07
TOP3A-215ENST00000583328 TRMT13Q9NUP7 481 aaKnown RBP14.63□□□□□ -0.07
TOP3A-215ENST00000583328 ARIH1Q9Y4X5 557 aaPredicted RBP14.63□□□□□ -0.07
TOP3A-215ENST00000583328 TCF20Q9UGU0 1960 aaKnown RBP14.62□□□□□ -0.07
TOP3A-215ENST00000583328 KIF28PB7ZC32 967 aa14.62□□□□□ -0.07
TOP3A-215ENST00000583328 GNAT2P19087 354 aa14.62□□□□□ -0.07
TOP3A-215ENST00000583328 SNAP25P60880 206 aa14.62□□□□□ -0.07
TOP3A-215ENST00000583328 TMEM31Q5JXX7 168 aa14.62□□□□□ -0.07
TOP3A-215ENST00000583328 KRT40Q6A162 431 aa14.62□□□□□ -0.07
TOP3A-215ENST00000583328 NEDD1Q8NHV4 660 aa14.62□□□□□ -0.07
TOP3A-215ENST00000583328 APPBP2Q92624 585 aa14.62□□□□□ -0.07
TOP3A-215ENST00000583328 VTA1Q9NP79 307 aa14.62□□□□□ -0.07
TOP3A-215ENST00000583328 GPHNQ9NQX3 736 aaPredicted RBP14.62□□□□□ -0.07
TOP3A-215ENST00000583328 POLR3EQ9NVU0 708 aa14.62□□□□□ -0.07
TOP3A-215ENST00000583328 CYP39A1Q9NYL5 469 aa14.62□□□□□ -0.07
TOP3A-215ENST00000583328 ZNF536O15090 1300 aa14.62□□□□□ -0.07
TOP3A-215ENST00000583328 TNKSO95271 1327 aa14.62□□□□□ -0.07
TOP3A-215ENST00000583328 EPOPA6NHQ4 379 aa14.61□□□□□ -0.07
TOP3A-215ENST00000583328 GPAA1O43292 621 aa14.61□□□□□ -0.07
TOP3A-215ENST00000583328 TLL1O43897 1013 aa14.61□□□□□ -0.07
TOP3A-215ENST00000583328 MYL3P08590 195 aa14.61□□□□□ -0.07
TOP3A-215ENST00000583328 MCCP23508 829 aa14.61□□□□□ -0.07
TOP3A-215ENST00000583328 TFAP4Q01664 338 aa14.61□□□□□ -0.07
TOP3A-215ENST00000583328 PDE4BQ07343 736 aa14.61□□□□□ -0.07
TOP3A-215ENST00000583328 DUSP28Q4G0W2 176 aa14.61□□□□□ -0.07
TOP3A-215ENST00000583328 MUM1L1Q5H9M0 696 aa14.61□□□□□ -0.07
TOP3A-215ENST00000583328 NSMFQ6X4W1 530 aa14.61□□□□□ -0.07
TOP3A-215ENST00000583328 RETREG2Q8NC44 543 aa14.61□□□□□ -0.07
TOP3A-215ENST00000583328 PHOSPHO2Q8TCD6 241 aa14.61□□□□□ -0.07
TOP3A-215ENST00000583328 HLA-CQ95604 372 aa14.61□□□□□ -0.07
TOP3A-215ENST00000583328 GMCL1Q96IK5 515 aa14.61□□□□□ -0.07
TOP3A-215ENST00000583328 SLC9A7Q96T83 725 aa14.61□□□□□ -0.07
TOP3A-215ENST00000583328 FTOQ9C0B1 505 aaKnown RBP eCLIP14.61□□□□□ -0.07
TOP3A-215ENST00000583328 EPB41L4AQ9HCS5 686 aaPredicted RBP14.61□□□□□ -0.07
TOP3A-215ENST00000583328 MCM3APO60318 1980 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms