RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 ATRNL1Q5VV63 1379 aa11.33□□□□□ -0.6
TRAPPC8-211ENST00000582539 STXBP3O00186 592 aa11.33□□□□□ -0.6
TRAPPC8-211ENST00000582539 PLEKHA8P1O95397 391 aa11.33□□□□□ -0.6
TRAPPC8-211ENST00000582539 DNM2P50570 870 aa11.33□□□□□ -0.6
TRAPPC8-211ENST00000582539 SPA17Q15506 151 aa11.33□□□□□ -0.6
TRAPPC8-211ENST00000582539 RDM1Q8NG50 284 aa11.33□□□□□ -0.6
TRAPPC8-211ENST00000582539 FUCA2Q9BTY2 467 aa11.33□□□□□ -0.6
TRAPPC8-211ENST00000582539 NBPF3Q9H094 633 aa11.33□□□□□ -0.6
TRAPPC8-211ENST00000582539 MYO6Q9UM54 1294 aa11.33□□□□□ -0.6
TRAPPC8-211ENST00000582539 PCDHA1Q9Y5I3 950 aa11.33□□□□□ -0.6
TRAPPC8-211ENST00000582539 STAM2O75886 525 aa11.33□□□□□ -0.6
TRAPPC8-211ENST00000582539 RPN1P04843 607 aaKnown RBP11.33□□□□□ -0.6
TRAPPC8-211ENST00000582539 CCT6AP40227 531 aaKnown RBP11.33□□□□□ -0.6
TRAPPC8-211ENST00000582539 FAM173BQ6P4H8 233 aa11.33□□□□□ -0.6
TRAPPC8-211ENST00000582539 GAS2L3Q86XJ1 694 aa11.33□□□□□ -0.6
TRAPPC8-211ENST00000582539 CCDC24Q8N4L8 307 aa11.33□□□□□ -0.6
TRAPPC8-211ENST00000582539 RBM46Q8TBY0 533 aaKnown RBP11.33□□□□□ -0.6
TRAPPC8-211ENST00000582539 RHBDL3P58872 404 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 SNRPFP62306 86 aaKnown RBP11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 CLUL1Q15846 466 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 FAM182BQ5T319 152 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 USP17L2Q6R6M4 530 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 HS2ST1Q7LGA3 356 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 SNX29Q8TEQ0 813 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 AKR1B15C9JRZ8 316 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 PDHBP11177 359 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 DBNDD1Q9H9R9 158 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 MYO1AQ9UBC5 1043 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 MAD2L2Q9UI95 211 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 PCDHA12Q9UN75 941 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 CHD4Q14839 1912 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 SBF2Q86WG5 1849 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 N4BP1O75113 896 aaKnown RBP11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 VIL1P09327 827 aaKnown RBP11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 NT5DC1Q5TFE4 455 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 SPECC1LQ69YQ0 1117 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 SPC24Q8NBT2 197 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 MKRN1Q9UHC7 482 aaKnown RBP11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 LAMB1P07942 1786 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 NAV1Q8NEY1 1877 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 GNPTABQ3T906 1256 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 APBB1IPQ7Z5R6 666 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 LUZP1Q86V48 1076 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 PLA2G4DQ86XP0 818 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 DYNLL2Q96FJ2 89 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 UBR3Q6ZT12 1888 aa11.32□□□□□ -0.6
TRAPPC8-211ENST00000582539 COL1A1P02452 1464 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 CCDC175P0C221 793 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 CYP2D6P10635 497 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 SYCP1Q15431 976 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 PPP1R2P3Q6NXS1 205 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 NIPA1Q7RTP0 329 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 CCDC186Q7Z3E2 898 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 FILIP1Q7Z7B0 1213 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 TEKT3Q9BXF9 490 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 FAM217BQ9NTX9 383 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 COL4A3BPQ9Y5P4 624 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 FOXP2O15409 715 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 SKILP12757 684 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 ANXA13P27216 316 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 GIMAP8Q8ND71 665 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 PIGSQ96S52 555 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 PCDHA5Q9Y5H7 936 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 TAF6LQ9Y6J9 622 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 USP17L5A8MUK1 530 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 CTNND1O60716 968 aaKnown RBP11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 SCNN1DP51172 638 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 INF2Q27J81 1249 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 SPDYE2Q495Y8 402 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 CAMKK2Q96RR4 588 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 GPHNQ9NQX3 736 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 IFNKQ9P0W0 207 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 ZNF70Q9UC06 446 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 NFE2L3Q9Y4A8 694 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 PPME1Q9Y570 386 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 CASZ1Q86V15 1759 aa11.31□□□□□ -0.6
TRAPPC8-211ENST00000582539 MAFGO15525 162 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 PDE4DQ08499 809 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 MORC3Q14149 939 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 COBLL1Q53SF7 1204 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 MSL1Q68DK7 614 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 UNC13DQ70J99 1090 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 PAGE5Q96GU1 130 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 CEP63Q96MT8 703 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 ANO3Q9BYT9 981 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 MAN1B1Q9UKM7 699 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 PCDHA6Q9UN73 950 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 PCDHA8Q9Y5H6 950 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 ITIH6Q6UXX5 1313 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 SNHG28P0DPA3 235 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 CCNE1P24864 410 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 AFMP43652 599 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 GABPAQ06546 454 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 ZNF827Q17R98 1081 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 CCDC40Q4G0X9 1142 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 ARHGAP29Q52LW3 1261 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 DPY19L2Q6NUT2 758 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 BTNL9Q6UXG8 535 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 TBCKQ8TEA7 893 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 LARP4BQ92615 738 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms