RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 OPLAHO14841 1288 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 CA12O43570 354 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 TLR2O60603 784 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 ALDH1A1P00352 501 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 BCRP11274 1271 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 ALAS1P13196 640 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 PDCP20941 246 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 NAPAP54920 295 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 ERVK-9P63128 1117 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 ERVK-24P63145 666 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 NPY5RQ15761 445 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 MUM1L1Q5H9M0 696 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 KRT40Q6A162 431 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 C17orf99Q6UX52 265 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 RIOX2Q8IUF8 465 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 ANKRD13CQ8N6S4 541 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 DNAJC5GQ8N7S2 189 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 ZNF713Q8N859 430 aaPredicted RBP10.98□□□□□ -0.65
RFFL-210ENST00000582308 CLEC4DQ8WXI8 215 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 PHF20Q9BVI0 1012 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 MOV10L1Q9BXT6 1211 aaKnown RBP10.98□□□□□ -0.65
RFFL-210ENST00000582308 ZFYVE28Q9HCC9 887 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 MORF4L1Q9UBU8 362 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 CPA4Q9UI42 421 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 PNMA2Q9UL42 364 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 ABCB11O95342 1321 aa10.98□□□□□ -0.65
RFFL-210ENST00000582308 ESYT2A0FGR8 921 aa10.97□□□□□ -0.65
RFFL-210ENST00000582308 SMCO2A6NFE2 343 aa10.97□□□□□ -0.65
RFFL-210ENST00000582308 NLRP5P59047 1200 aa10.97□□□□□ -0.65
RFFL-210ENST00000582308 TRAF1Q13077 416 aa10.97□□□□□ -0.65
RFFL-210ENST00000582308 PKP1Q13835 747 aa10.97□□□□□ -0.65
RFFL-210ENST00000582308 PPP1R18Q6NYC8 613 aa10.97□□□□□ -0.65
RFFL-210ENST00000582308 FAM177A1Q8N128 213 aaPredicted RBP10.97□□□□□ -0.65
RFFL-210ENST00000582308 GPRC5AQ8NFJ5 357 aa10.97□□□□□ -0.65
RFFL-210ENST00000582308 TBC1D5Q92609 795 aa10.97□□□□□ -0.65
RFFL-210ENST00000582308 TRERF1Q96PN7 1200 aa10.97□□□□□ -0.65
RFFL-210ENST00000582308 ZMYND12Q9H0C1 365 aa10.97□□□□□ -0.65
RFFL-210ENST00000582308 HOMER2Q9NSB8 354 aa10.97□□□□□ -0.65
RFFL-210ENST00000582308 RNF146Q9NTX7 359 aa10.97□□□□□ -0.65
RFFL-210ENST00000582308 RNF186Q9NXI6 227 aa10.97□□□□□ -0.65
RFFL-210ENST00000582308 MRPL11Q9Y3B7 192 aaKnown RBP10.97□□□□□ -0.65
RFFL-210ENST00000582308 PLXNA1Q9UIW2 1896 aa10.97□□□□□ -0.65
RFFL-210ENST00000582308 MYH15Q9Y2K3 1946 aa10.97□□□□□ -0.65
RFFL-210ENST00000582308 ZSWIM8A7E2V4 1837 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 H3BQV1 296 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 NFIBO00712 420 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 STX6O43752 255 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 TRPA1O75762 1119 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 SLC25A27O95847 323 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 MMP1P03956 469 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 XBP1P17861 261 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 ERCC3P19447 782 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 TRIM29Q14134 588 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 FAM110CQ1W6H9 321 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 TKFCQ3LXA3 575 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 IFFO2Q5TF58 517 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 RGS22Q8NE09 1264 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 CCDC148Q8NFR7 591 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 OXER1Q8TDS5 423 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 CCDC12Q8WUD4 166 aaPredicted RBP10.96□□□□□ -0.65
RFFL-210ENST00000582308 PORCNQ9H237 461 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 PSTPIP2Q9H939 334 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 RIC8AQ9NPQ8 531 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 MTMR6Q9Y217 621 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 ZDHHC9Q9Y397 364 aa10.96□□□□□ -0.65
RFFL-210ENST00000582308 MCM3APO60318 1980 aa10.96□□□□□ -0.66
RFFL-210ENST00000582308 VPS37CA5D8V6 355 aaPredicted RBP10.95□□□□□ -0.66
RFFL-210ENST00000582308 M0R2N6 131 aa10.95□□□□□ -0.66
RFFL-210ENST00000582308 MEIS2O14770 477 aa10.95□□□□□ -0.66
RFFL-210ENST00000582308 TBC1D8O95759 1140 aa10.95□□□□□ -0.66
RFFL-210ENST00000582308 CALML3P27482 149 aa10.95□□□□□ -0.66
RFFL-210ENST00000582308 ADCY7P51828 1080 aa10.95□□□□□ -0.66
RFFL-210ENST00000582308 UBE2SQ16763 222 aa10.95□□□□□ -0.66
RFFL-210ENST00000582308 GALNT17Q6IS24 598 aa10.95□□□□□ -0.66
RFFL-210ENST00000582308 USP17L6PQ6QN14 398 aa10.95□□□□□ -0.66
RFFL-210ENST00000582308 NCAPG2Q86XI2 1143 aa10.95□□□□□ -0.66
RFFL-210ENST00000582308 BLIDQ8IZY5 108 aa10.95□□□□□ -0.66
RFFL-210ENST00000582308 DAGLBQ8NCG7 672 aa10.95□□□□□ -0.66
RFFL-210ENST00000582308 SHCBP1Q8NEM2 672 aa10.95□□□□□ -0.66
RFFL-210ENST00000582308 CHST13Q8NET6 341 aa10.95□□□□□ -0.66
RFFL-210ENST00000582308 CUL5Q93034 780 aa10.95□□□□□ -0.66
RFFL-210ENST00000582308 CFHR5Q9BXR6 569 aa10.95□□□□□ -0.66
RFFL-210ENST00000582308 EFCC1Q9HA90 598 aa10.95□□□□□ -0.66
RFFL-210ENST00000582308 C6orf50Q9HD87 102 aa10.95□□□□□ -0.66
RFFL-210ENST00000582308 PCDHA4Q9UN74 947 aa10.95□□□□□ -0.66
RFFL-210ENST00000582308 BTBD18B2RXH4 712 aa10.94□□□□□ -0.66
RFFL-210ENST00000582308 PIK3CDO00329 1044 aa10.94□□□□□ -0.66
RFFL-210ENST00000582308 CFBP00751 764 aa10.94□□□□□ -0.66
RFFL-210ENST00000582308 GNA11P29992 359 aa10.94□□□□□ -0.66
RFFL-210ENST00000582308 HOXA13P31271 388 aaPredicted RBP10.94□□□□□ -0.66
RFFL-210ENST00000582308 COPB2P35606 906 aa10.94□□□□□ -0.66
RFFL-210ENST00000582308 KRT2P35908 639 aa10.94□□□□□ -0.66
RFFL-210ENST00000582308 CLK2P49760 499 aaKnown RBP10.94□□□□□ -0.66
RFFL-210ENST00000582308 HSD17B4P51659 736 aa10.94□□□□□ -0.66
RFFL-210ENST00000582308 MRPL12P52815 198 aaKnown RBP10.94□□□□□ -0.66
RFFL-210ENST00000582308 CCNA1P78396 465 aa10.94□□□□□ -0.66
RFFL-210ENST00000582308 GHRHRQ02643 423 aa10.94□□□□□ -0.66
RFFL-210ENST00000582308 NR5A1Q13285 461 aa10.94□□□□□ -0.66
RFFL-210ENST00000582308 NOM1Q5C9Z4 860 aaKnown RBP10.94□□□□□ -0.66
RFFL-210ENST00000582308 FOXD4L5Q5VV16 416 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms