RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 ZNF396Q96N95 335 aaPredicted RBP14.47□□□□□ -0.09
SRSF1-204ENST00000581979 FEZ1Q99689 392 aa14.47□□□□□ -0.09
SRSF1-204ENST00000581979 CFAP45Q9UL16 551 aa14.47□□□□□ -0.09
SRSF1-204ENST00000581979 USP17L15C9J2P7 530 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 USP17L13C9JLJ4 530 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 USP17L11C9JVI0 530 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 KLRF2D3W0D1 207 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 USP17L18D6R9N7 530 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 USP17L22D6RA61 530 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 USP17L17D6RBQ6 530 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 USP17L19D6RCP7 530 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 USP17L20D6RJB6 530 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 SLC34A2O95436 690 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 EEF2P13639 858 aaKnown RBP14.46□□□□□ -0.09
SRSF1-204ENST00000581979 ICA1Q05084 483 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 USP17L24Q0WX57 530 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 PKN1Q16512 942 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 RASGRP2Q7LDG7 609 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 BRAPQ7Z569 592 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 UBE2Q1Q7Z7E8 422 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 UNC93B1Q9H1C4 597 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 NYAP2Q9P242 653 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 TFIP11Q9UBB9 837 aaKnown RBP14.46□□□□□ -0.09
SRSF1-204ENST00000581979 KCNJ14Q9UNX9 436 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 FRMPD2Q68DX3 1309 aaPredicted RBP14.46□□□□□ -0.09
SRSF1-204ENST00000581979 PLXNB2O15031 1838 aa14.46□□□□□ -0.09
SRSF1-204ENST00000581979 MMP1P03956 469 aa14.46□□□□□ -0.1
SRSF1-204ENST00000581979 PDHBP11177 359 aa14.46□□□□□ -0.1
SRSF1-204ENST00000581979 CAPN2P17655 700 aa14.46□□□□□ -0.1
SRSF1-204ENST00000581979 VCAM1P19320 739 aa14.46□□□□□ -0.1
SRSF1-204ENST00000581979 ERVK-9P63128 1117 aa14.46□□□□□ -0.1
SRSF1-204ENST00000581979 ERVK-24P63145 666 aa14.46□□□□□ -0.1
SRSF1-204ENST00000581979 ZYXQ15942 572 aaKnown RBP14.46□□□□□ -0.1
SRSF1-204ENST00000581979 ASPRV1Q53RT3 343 aa14.46□□□□□ -0.1
SRSF1-204ENST00000581979 CATSPERGQ6ZRH7 1159 aa14.46□□□□□ -0.1
SRSF1-204ENST00000581979 SPATA32Q96LK8 384 aa14.46□□□□□ -0.1
SRSF1-204ENST00000581979 SCAND2PQ9GZW5 306 aaPredicted RBP14.46□□□□□ -0.1
SRSF1-204ENST00000581979 VPS54Q9P1Q0 977 aa14.46□□□□□ -0.1
SRSF1-204ENST00000581979 KIF28PB7ZC32 967 aa14.45□□□□□ -0.1
SRSF1-204ENST00000581979 PEX10O60683 326 aa14.45□□□□□ -0.1
SRSF1-204ENST00000581979 SGPL1O95470 568 aa14.45□□□□□ -0.1
SRSF1-204ENST00000581979 MBD3O95983 291 aa14.45□□□□□ -0.1
SRSF1-204ENST00000581979 SCG2P13521 617 aa14.45□□□□□ -0.1
SRSF1-204ENST00000581979 MAPK4P31152 587 aa14.45□□□□□ -0.1
SRSF1-204ENST00000581979 PFKFB3Q16875 520 aaPredicted RBP14.45□□□□□ -0.1
SRSF1-204ENST00000581979 KLHL40Q2TBA0 621 aa14.45□□□□□ -0.1
SRSF1-204ENST00000581979 Q3C1V9 767 aa14.45□□□□□ -0.1
SRSF1-204ENST00000581979 ATL3Q6DD88 541 aa14.45□□□□□ -0.1
SRSF1-204ENST00000581979 LBX2Q6XYB7 198 aa14.45□□□□□ -0.1
SRSF1-204ENST00000581979 U2AF1L4Q8WU68 220 aaKnown RBP14.45□□□□□ -0.1
SRSF1-204ENST00000581979 MKL1Q969V6 931 aa14.45□□□□□ -0.1
SRSF1-204ENST00000581979 PAK6Q9NQU5 681 aaPredicted RBP14.45□□□□□ -0.1
SRSF1-204ENST00000581979 RABGAP1Q9Y3P9 1069 aa14.45□□□□□ -0.1
SRSF1-204ENST00000581979 A0A1W2PRG0 241 aa14.44□□□□□ -0.1
SRSF1-204ENST00000581979 RAD21O60216 631 aa14.44□□□□□ -0.1
SRSF1-204ENST00000581979 DIS3L2Q8IYB7 885 aaKnown RBP14.44□□□□□ -0.1
SRSF1-204ENST00000581979 SOCS4Q8WXH5 440 aa14.44□□□□□ -0.1
SRSF1-204ENST00000581979 SPZ1Q9BXG8 430 aa14.44□□□□□ -0.1
SRSF1-204ENST00000581979 CYTH3O43739 400 aa14.44□□□□□ -0.1
SRSF1-204ENST00000581979 GADD45BO75293 160 aaPredicted RBP14.44□□□□□ -0.1
SRSF1-204ENST00000581979 HMGCRP04035 888 aa14.44□□□□□ -0.1
SRSF1-204ENST00000581979 SNHG28P0DPA3 235 aa14.44□□□□□ -0.1
SRSF1-204ENST00000581979 XRCC5P13010 732 aaKnown RBP14.44□□□□□ -0.1
SRSF1-204ENST00000581979 SMARCA1P28370 1054 aa14.44□□□□□ -0.1
SRSF1-204ENST00000581979 CEBPZQ03701 1054 aaKnown RBP14.44□□□□□ -0.1
SRSF1-204ENST00000581979 CCDC96Q2M329 555 aa14.44□□□□□ -0.1
SRSF1-204ENST00000581979 TPRNQ4KMQ1 711 aa14.44□□□□□ -0.1
SRSF1-204ENST00000581979 MYSM1Q5VVJ2 828 aa14.44□□□□□ -0.1
SRSF1-204ENST00000581979 GPT2Q8TD30 523 aa14.44□□□□□ -0.1
SRSF1-204ENST00000581979 PHF20Q9BVI0 1012 aa14.44□□□□□ -0.1
SRSF1-204ENST00000581979 PORCNQ9H237 461 aa14.44□□□□□ -0.1
SRSF1-204ENST00000581979 ARHGEF10LQ9HCE6 1279 aa14.44□□□□□ -0.1
SRSF1-204ENST00000581979 GPCPD1Q9NPB8 672 aa14.44□□□□□ -0.1
SRSF1-204ENST00000581979 ISY1Q9ULR0 285 aaKnown RBP14.44□□□□□ -0.1
SRSF1-204ENST00000581979 ELP1O95163 1332 aa14.43□□□□□ -0.1
SRSF1-204ENST00000581979 BTBD18B2RXH4 712 aa14.43□□□□□ -0.1
SRSF1-204ENST00000581979 CNMDO75829 334 aa14.43□□□□□ -0.1
SRSF1-204ENST00000581979 U2AF2P26368 475 aaKnown RBP eCLIP14.43□□□□□ -0.17e-14■■■□□ 15.6
SRSF1-204ENST00000581979 KRT2P35908 639 aa14.43□□□□□ -0.1
SRSF1-204ENST00000581979 UBE2HP62256 183 aa14.43□□□□□ -0.1
SRSF1-204ENST00000581979 ZNF543Q08ER8 600 aa14.43□□□□□ -0.1
SRSF1-204ENST00000581979 SLFN13Q68D06 897 aa14.43□□□□□ -0.1
SRSF1-204ENST00000581979 SIAH1Q8IUQ4 282 aa14.43□□□□□ -0.1
SRSF1-204ENST00000581979 DCAF4Q8WV16 495 aa14.43□□□□□ -0.1
SRSF1-204ENST00000581979 LEO1Q8WVC0 666 aaPredicted RBP14.43□□□□□ -0.1
SRSF1-204ENST00000581979 USP6NLQ92738 828 aa14.43□□□□□ -0.1
SRSF1-204ENST00000581979 RRP36Q96EU6 259 aaKnown RBP14.43□□□□□ -0.1
SRSF1-204ENST00000581979 USP28Q96RU2 1077 aa14.43□□□□□ -0.1
SRSF1-204ENST00000581979 NUDT12Q9BQG2 462 aa14.43□□□□□ -0.1
SRSF1-204ENST00000581979 PAGR1Q9BTK6 254 aa14.43□□□□□ -0.1
SRSF1-204ENST00000581979 UBA5Q9GZZ9 404 aa14.43□□□□□ -0.1
SRSF1-204ENST00000581979 CRISPLD2Q9H0B8 497 aa14.43□□□□□ -0.1
SRSF1-204ENST00000581979 GZF1Q9H116 711 aaPredicted RBP14.43□□□□□ -0.1
SRSF1-204ENST00000581979 FOXP1Q9H334 677 aaPredicted RBP14.43□□□□□ -0.1
SRSF1-204ENST00000581979 CPVLQ9H3G5 476 aa14.43□□□□□ -0.1
SRSF1-204ENST00000581979 RPAP3Q9H6T3 665 aaPredicted RBP14.43□□□□□ -0.1
SRSF1-204ENST00000581979 VAT1LQ9HCJ6 419 aa14.43□□□□□ -0.1
SRSF1-204ENST00000581979 BRMS1Q9HCU9 246 aa14.43□□□□□ -0.1
SRSF1-204ENST00000581979 NLRP5P59047 1200 aa14.42□□□□□ -0.1
SRSF1-204ENST00000581979 SLC35G1Q2M3R5 365 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms