RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 HOMER2Q9NSB8 354 aa18.47■□□□□ 0.55
CCDC57-213ENST00000581625 TRIM17Q9Y577 477 aa18.47■□□□□ 0.55
CCDC57-213ENST00000581625 PLXNB2O15031 1838 aa18.46■□□□□ 0.55
CCDC57-213ENST00000581625 SLC15A5A6NIM6 579 aa18.46■□□□□ 0.55
CCDC57-213ENST00000581625 PTPREP23469 700 aa18.46■□□□□ 0.55
CCDC57-213ENST00000581625 SLC4A3P48751 1232 aa18.46■□□□□ 0.55
CCDC57-213ENST00000581625 AKAP17AQ02040 695 aaKnown RBP18.46■□□□□ 0.55
CCDC57-213ENST00000581625 NTRK3Q16288 839 aa18.46■□□□□ 0.55
CCDC57-213ENST00000581625 OTOP1Q7RTM1 612 aa18.46■□□□□ 0.55
CCDC57-213ENST00000581625 TRIM22Q8IYM9 498 aa18.46■□□□□ 0.55
CCDC57-213ENST00000581625 TRERF1Q96PN7 1200 aa18.46■□□□□ 0.55
CCDC57-213ENST00000581625 MMP19Q99542 508 aa18.46■□□□□ 0.55
CCDC57-213ENST00000581625 NUDT12Q9BQG2 462 aa18.46■□□□□ 0.55
CCDC57-213ENST00000581625 SRRDQ9UH36 339 aa18.46■□□□□ 0.55
CCDC57-213ENST00000581625 MRPL11Q9Y3B7 192 aaKnown RBP18.46■□□□□ 0.55
CCDC57-213ENST00000581625 PFASO15067 1338 aa18.46■□□□□ 0.55
CCDC57-213ENST00000581625 RBBP6Q7Z6E9 1792 aaKnown RBP18.45■□□□□ 0.54
CCDC57-213ENST00000581625 PPP1R11O60927 126 aaPredicted RBP18.45■□□□□ 0.54
CCDC57-213ENST00000581625 LARGE1O95461 756 aa18.45■□□□□ 0.54
CCDC57-213ENST00000581625 PKN2Q16513 984 aaKnown RBP18.45■□□□□ 0.54
CCDC57-213ENST00000581625 PCDHA1Q9Y5I3 950 aa18.45■□□□□ 0.54
CCDC57-213ENST00000581625 CASP8AP2Q9UKL3 1982 aa18.44■□□□□ 0.54
CCDC57-213ENST00000581625 PRPF3O43395 683 aaKnown RBP18.44■□□□□ 0.54
CCDC57-213ENST00000581625 ECM2O94769 699 aaPredicted RBP18.44■□□□□ 0.54
CCDC57-213ENST00000581625 ADORA2AP29274 412 aa18.44■□□□□ 0.54
CCDC57-213ENST00000581625 RGS2P41220 211 aa18.44■□□□□ 0.54
CCDC57-213ENST00000581625 CAP1Q01518 475 aa18.44■□□□□ 0.54
CCDC57-213ENST00000581625 PRKCZQ05513 592 aa18.44■□□□□ 0.54
CCDC57-213ENST00000581625 IRF5Q13568 498 aa18.44■□□□□ 0.54
CCDC57-213ENST00000581625 MORN1Q5T089 497 aa18.44■□□□□ 0.54
CCDC57-213ENST00000581625 MCF2L2Q86YR7 1114 aa18.44■□□□□ 0.54
CCDC57-213ENST00000581625 PIBF1Q8WXW3 757 aa18.44■□□□□ 0.54
CCDC57-213ENST00000581625 APBA2Q99767 749 aa18.44■□□□□ 0.54
CCDC57-213ENST00000581625 SLC5A4Q9NY91 659 aa18.44■□□□□ 0.54
CCDC57-213ENST00000581625 MYH6P13533 1939 aa18.44■□□□□ 0.54
CCDC57-213ENST00000581625 STK36Q9NRP7 1315 aa18.44■□□□□ 0.54
CCDC57-213ENST00000581625 MAP2K5Q13163 448 aa18.43■□□□□ 0.54
CCDC57-213ENST00000581625 MUM1L1Q5H9M0 696 aa18.43■□□□□ 0.54
CCDC57-213ENST00000581625 PPP1R18Q6NYC8 613 aa18.43■□□□□ 0.54
CCDC57-213ENST00000581625 ANKRD35Q8N283 1001 aa18.43■□□□□ 0.54
CCDC57-213ENST00000581625 SAMD3Q8N6K7 520 aa18.43■□□□□ 0.54
CCDC57-213ENST00000581625 RGS22Q8NE09 1264 aa18.43■□□□□ 0.54
CCDC57-213ENST00000581625 CLEC4DQ8WXI8 215 aa18.43■□□□□ 0.54
CCDC57-213ENST00000581625 PHKBQ93100 1093 aa18.43■□□□□ 0.54
CCDC57-213ENST00000581625 SLC26A6Q9BXS9 759 aa18.43■□□□□ 0.54
CCDC57-213ENST00000581625 A1CFQ9NQ94 594 aaKnown RBP18.43■□□□□ 0.54
CCDC57-213ENST00000581625 V9GY48 417 aaPredicted RBP18.43■□□□□ 0.54
CCDC57-213ENST00000581625 NFIBO00712 420 aa18.42■□□□□ 0.54
CCDC57-213ENST00000581625 DEXIO95424 95 aa18.42■□□□□ 0.54
CCDC57-213ENST00000581625 HOXC6P09630 235 aa18.42■□□□□ 0.54
CCDC57-213ENST00000581625 XRCC5P13010 732 aaKnown RBP18.42■□□□□ 0.54
CCDC57-213ENST00000581625 SCG2P13521 617 aa18.42■□□□□ 0.54
CCDC57-213ENST00000581625 FLT3LGP49771 235 aa18.42■□□□□ 0.54
CCDC57-213ENST00000581625 SSRP1Q08945 709 aaKnown RBP18.42■□□□□ 0.54
CCDC57-213ENST00000581625 PFKFB3Q16875 520 aaPredicted RBP18.42■□□□□ 0.54
CCDC57-213ENST00000581625 HEATR3Q7Z4Q2 680 aa18.42■□□□□ 0.54
CCDC57-213ENST00000581625 TEX2Q8IWB9 1127 aa18.42■□□□□ 0.54
CCDC57-213ENST00000581625 NECAB1Q8N987 351 aa18.42■□□□□ 0.54
CCDC57-213ENST00000581625 USP6NLQ92738 828 aa18.42■□□□□ 0.54
CCDC57-213ENST00000581625 DDX11Q96FC9 970 aa18.42■□□□□ 0.54
CCDC57-213ENST00000581625 MAP3K20Q9NYL2 800 aaKnown RBP18.42■□□□□ 0.54
CCDC57-213ENST00000581625 GJD2Q9UKL4 321 aa18.42■□□□□ 0.54
CCDC57-213ENST00000581625 hCG_1642624A0A1W2PR95 340 aa18.41■□□□□ 0.54
CCDC57-213ENST00000581625 CD2BP2O95400 341 aaKnown RBP18.41■□□□□ 0.54
CCDC57-213ENST00000581625 TAL1P17542 331 aaPredicted RBP18.41■□□□□ 0.54
CCDC57-213ENST00000581625 GHRHRQ02643 423 aa18.41■□□□□ 0.54
CCDC57-213ENST00000581625 NSMFQ6X4W1 530 aa18.41■□□□□ 0.54
CCDC57-213ENST00000581625 TRMT44Q8IYL2 757 aaKnown RBP18.41■□□□□ 0.54
CCDC57-213ENST00000581625 RAET1EQ8TD07 263 aa18.41■□□□□ 0.54
CCDC57-213ENST00000581625 CCDC12Q8WUD4 166 aaPredicted RBP18.41■□□□□ 0.54
CCDC57-213ENST00000581625 LLPHQ9BRT6 129 aaKnown RBP18.41■□□□□ 0.54
CCDC57-213ENST00000581625 BARHL2Q9NY43 387 aa18.41■□□□□ 0.54
CCDC57-213ENST00000581625 CYP39A1Q9NYL5 469 aa18.41■□□□□ 0.54
CCDC57-213ENST00000581625 GABRQQ9UN88 632 aa18.41■□□□□ 0.54
CCDC57-213ENST00000581625 DIS3Q9Y2L1 958 aaKnown RBP18.41■□□□□ 0.54
CCDC57-213ENST00000581625 PTPN22Q9Y2R2 807 aa18.41■□□□□ 0.54
CCDC57-213ENST00000581625 DNAJC25-GNG10A0A024R161 153 aa18.4■□□□□ 0.54
CCDC57-213ENST00000581625 WWC2Q6AWC2 1192 aa18.4■□□□□ 0.54
CCDC57-213ENST00000581625 FBXO46Q6PJ61 603 aaPredicted RBP18.4■□□□□ 0.54
CCDC57-213ENST00000581625 RNF207Q6ZRF8 634 aa18.4■□□□□ 0.54
CCDC57-213ENST00000581625 DPP9Q86TI2 863 aa18.4■□□□□ 0.54
CCDC57-213ENST00000581625 CCDC83Q8IWF9 413 aa18.4■□□□□ 0.54
CCDC57-213ENST00000581625 FAM177A1Q8N128 213 aaPredicted RBP18.4■□□□□ 0.54
CCDC57-213ENST00000581625 WASF1Q92558 559 aa18.4■□□□□ 0.54
CCDC57-213ENST00000581625 TMX3Q96JJ7 454 aa18.4■□□□□ 0.54
CCDC57-213ENST00000581625 PTPDC1A2A3K4 754 aa18.39■□□□□ 0.53
CCDC57-213ENST00000581625 NAPAP54920 295 aa18.39■□□□□ 0.53
CCDC57-213ENST00000581625 ST3GAL1Q11201 340 aa18.39■□□□□ 0.53
CCDC57-213ENST00000581625 PKN1Q16512 942 aa18.39■□□□□ 0.53
CCDC57-213ENST00000581625 SLAIN1Q8ND83 568 aa18.39■□□□□ 0.53
CCDC57-213ENST00000581625 NSUN7Q8NE18 718 aaKnown RBP18.39■□□□□ 0.53
CCDC57-213ENST00000581625 CCDC148Q8NFR7 591 aa18.39■□□□□ 0.53
CCDC57-213ENST00000581625 PXYLP1Q8TE99 480 aa18.39■□□□□ 0.53
CCDC57-213ENST00000581625 GPKOWQ92917 476 aaPredicted RBP eCLIP18.39■□□□□ 0.53
CCDC57-213ENST00000581625 BAZ2BQ9UIF8 2168 aaKnown RBP18.39■□□□□ 0.53
CCDC57-213ENST00000581625 POTEB2H3BUK9 544 aa18.38■□□□□ 0.53
CCDC57-213ENST00000581625 STXBP3O00186 592 aa18.38■□□□□ 0.53
CCDC57-213ENST00000581625 OPLAHO14841 1288 aa18.38■□□□□ 0.53
CCDC57-213ENST00000581625 CTDNEP1O95476 244 aa18.38■□□□□ 0.53
CCDC57-213ENST00000581625 CYP2B6P20813 491 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms