RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 SLC9A7Q96T83 725 aa17.59■□□□□ 0.41
IFT20-211ENST00000580991 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.59■□□□□ 0.41
IFT20-211ENST00000580991 ALDH8A1Q9H2A2 487 aaPredicted RBP17.59■□□□□ 0.41
IFT20-211ENST00000580991 SLC4A4Q9Y6R1 1079 aa17.59■□□□□ 0.41
IFT20-211ENST00000580991 ZBED9Q6R2W3 1325 aa17.58■□□□□ 0.4
IFT20-211ENST00000580991 FAM86C2PA6NEL3 165 aa17.58■□□□□ 0.4
IFT20-211ENST00000580991 PI4K2BG5E9Z4 385 aa17.58■□□□□ 0.4
IFT20-211ENST00000580991 DYNC1LI2O43237 492 aaPredicted RBP17.58■□□□□ 0.4
IFT20-211ENST00000580991 SUPT20HL2P0C7V6 817 aa17.58■□□□□ 0.4
IFT20-211ENST00000580991 PSMC6P62333 389 aa17.58■□□□□ 0.4
IFT20-211ENST00000580991 TAP1Q03518 808 aa17.58■□□□□ 0.4
IFT20-211ENST00000580991 SLFNL1Q499Z3 407 aa17.58■□□□□ 0.4
IFT20-211ENST00000580991 ALYREFQ86V81 257 aaKnown RBP17.58■□□□□ 0.4
IFT20-211ENST00000580991 ITPRIPQ8IWB1 547 aa17.58■□□□□ 0.4
IFT20-211ENST00000580991 FTSJ3Q8IY81 847 aaKnown RBP17.58■□□□□ 0.4
IFT20-211ENST00000580991 CLASRPQ8N2M8 674 aaKnown RBP17.58■□□□□ 0.4
IFT20-211ENST00000580991 PHOSPHO2Q8TCD6 241 aa17.58■□□□□ 0.4
IFT20-211ENST00000580991 RHPN1Q8TCX5 695 aa17.58■□□□□ 0.4
IFT20-211ENST00000580991 HOMER2Q9NSB8 354 aa17.58■□□□□ 0.4
IFT20-211ENST00000580991 PAG1Q9NWQ8 432 aa17.58■□□□□ 0.4
IFT20-211ENST00000580991 FEM1BQ9UK73 627 aa17.58■□□□□ 0.4
IFT20-211ENST00000580991 Q9Y3F1 56 aa17.58■□□□□ 0.4
IFT20-211ENST00000580991 FDX1P10109 184 aa17.57■□□□□ 0.4
IFT20-211ENST00000580991 SMPD1P17405 629 aa17.57■□□□□ 0.4
IFT20-211ENST00000580991 IQSEC1Q6DN90 963 aa17.57■□□□□ 0.4
IFT20-211ENST00000580991 DEFB128Q7Z7B8 93 aa17.57■□□□□ 0.4
IFT20-211ENST00000580991 ACAD9Q9H845 621 aa17.57■□□□□ 0.4
IFT20-211ENST00000580991 ARPP21Q9UBL0 812 aaPredicted RBP17.57■□□□□ 0.4
IFT20-211ENST00000580991 MYH4Q9Y623 1939 aa17.57■□□□□ 0.4
IFT20-211ENST00000580991 SCN5AQ14524 2016 aa17.56■□□□□ 0.4
IFT20-211ENST00000580991 KIF28PB7ZC32 967 aa17.56■□□□□ 0.4
IFT20-211ENST00000580991 IFIT2P09913 472 aaKnown RBP17.56■□□□□ 0.4
IFT20-211ENST00000580991 RASA1P20936 1047 aa17.56■□□□□ 0.4
IFT20-211ENST00000580991 MKNK2Q9HBH9 465 aa17.56■□□□□ 0.4
IFT20-211ENST00000580991 A1CFQ9NQ94 594 aaKnown RBP17.56■□□□□ 0.4
IFT20-211ENST00000580991 CLIP2Q9UDT6 1046 aa17.56■□□□□ 0.4
IFT20-211ENST00000580991 COG6Q9Y2V7 657 aa17.56■□□□□ 0.4
IFT20-211ENST00000580991 TNKSO95271 1327 aa17.55■□□□□ 0.4
IFT20-211ENST00000580991 SOWAHBA6NEL2 793 aa17.55■□□□□ 0.4
IFT20-211ENST00000580991 CYP2C9P11712 490 aa17.55■□□□□ 0.4
IFT20-211ENST00000580991 RFC2P35250 354 aa17.55■□□□□ 0.4
IFT20-211ENST00000580991 GRB10Q13322 594 aa17.55■□□□□ 0.4
IFT20-211ENST00000580991 UBE3CQ15386 1083 aa17.55■□□□□ 0.4
IFT20-211ENST00000580991 TRMT13Q9NUP7 481 aaKnown RBP17.55■□□□□ 0.4
IFT20-211ENST00000580991 SYNPO2Q9UMS6 1093 aa17.55■□□□□ 0.4
IFT20-211ENST00000580991 PRR33A8MZF0 331 aa17.54■□□□□ 0.4
IFT20-211ENST00000580991 PTGS1P23219 599 aa17.54■□□□□ 0.4
IFT20-211ENST00000580991 HERC6Q8IVU3 1022 aa17.54■□□□□ 0.4
IFT20-211ENST00000580991 RPAP2Q8IXW5 612 aaPredicted RBP17.54■□□□□ 0.4
IFT20-211ENST00000580991 MKL1Q969V6 931 aa17.54■□□□□ 0.4
IFT20-211ENST00000580991 KIF1BPQ96EK5 621 aa17.54■□□□□ 0.4
IFT20-211ENST00000580991 PDGFCQ9NRA1 345 aa17.54■□□□□ 0.4
IFT20-211ENST00000580991 MYH7P12883 1935 aa17.53■□□□□ 0.4
IFT20-211ENST00000580991 ARHGEF15O94989 841 aa17.53■□□□□ 0.4
IFT20-211ENST00000580991 SBK1Q52WX2 424 aa17.53■□□□□ 0.4
IFT20-211ENST00000580991 TAPT1Q6NXT6 567 aa17.53■□□□□ 0.4
IFT20-211ENST00000580991 GMCL1P1Q8NEA9 526 aa17.53■□□□□ 0.4
IFT20-211ENST00000580991 BOLA2Q9H3K6 86 aa17.53■□□□□ 0.4
IFT20-211ENST00000580991 CD320Q9NPF0 282 aa17.53■□□□□ 0.4
IFT20-211ENST00000580991 RNF146Q9NTX7 359 aa17.53■□□□□ 0.4
IFT20-211ENST00000580991 POLR3EQ9NVU0 708 aa17.53■□□□□ 0.4
IFT20-211ENST00000580991 LMCD1Q9NZU5 365 aa17.53■□□□□ 0.4
IFT20-211ENST00000580991 IGKV6D-41A0A0C4DH26 115 aa17.52■□□□□ 0.4
IFT20-211ENST00000580991 PITPNM1O00562 1244 aa17.52■□□□□ 0.4
IFT20-211ENST00000580991 LPXNO60711 386 aa17.52■□□□□ 0.4
IFT20-211ENST00000580991 CHGBP05060 677 aa17.52■□□□□ 0.4
IFT20-211ENST00000580991 BMP3P12645 472 aa17.52■□□□□ 0.4
IFT20-211ENST00000580991 TKFCQ3LXA3 575 aa17.52■□□□□ 0.4
IFT20-211ENST00000580991 EEPD1Q7L9B9 569 aa17.52■□□□□ 0.4
IFT20-211ENST00000580991 FBXO16Q8IX29 292 aaPredicted RBP17.52■□□□□ 0.4
IFT20-211ENST00000580991 STK11IPQ8N1F8 1099 aa17.52■□□□□ 0.4
IFT20-211ENST00000580991 FTOQ9C0B1 505 aaKnown RBP eCLIP17.52■□□□□ 0.4
IFT20-211ENST00000580991 PUS7LQ9H0K6 701 aaKnown RBP17.52■□□□□ 0.4
IFT20-211ENST00000580991 VTA1Q9NP79 307 aa17.52■□□□□ 0.4
IFT20-211ENST00000580991 TET1Q8NFU7 2136 aa17.51■□□□□ 0.39
IFT20-211ENST00000580991 IQCF3P0C7M6 154 aa17.51■□□□□ 0.39
IFT20-211ENST00000580991 RLBP1P12271 317 aa17.51■□□□□ 0.39
IFT20-211ENST00000580991 ATP5JP18859 108 aa17.51■□□□□ 0.39
IFT20-211ENST00000580991 STAT2P52630 851 aa17.51■□□□□ 0.39
IFT20-211ENST00000580991 PURAQ00577 322 aaKnown RBP17.51■□□□□ 0.39
IFT20-211ENST00000580991 DUSP28Q4G0W2 176 aa17.51■□□□□ 0.39
IFT20-211ENST00000580991 TMEM63BQ5T3F8 832 aa17.51■□□□□ 0.39
IFT20-211ENST00000580991 ZSCAN25Q6NSZ9 544 aa17.51■□□□□ 0.39
IFT20-211ENST00000580991 KIAA1211Q6ZU35 1233 aa17.51■□□□□ 0.39
IFT20-211ENST00000580991 ZNF444Q8N0Y2 327 aaPredicted RBP17.51■□□□□ 0.39
IFT20-211ENST00000580991 RETREG2Q8NC44 543 aa17.51■□□□□ 0.39
IFT20-211ENST00000580991 CEP95Q96GE4 821 aa17.51■□□□□ 0.39
IFT20-211ENST00000580991 TRERF1Q96PN7 1200 aa17.51■□□□□ 0.39
IFT20-211ENST00000580991 HAUS7Q99871 368 aa17.51■□□□□ 0.39
IFT20-211ENST00000580991 ZNF287Q9HBT7 754 aa17.51■□□□□ 0.39
IFT20-211ENST00000580991 MTMR4Q9NYA4 1195 aa17.51■□□□□ 0.39
IFT20-211ENST00000580991 DDX49Q9Y6V7 483 aaKnown RBP17.51■□□□□ 0.39
IFT20-211ENST00000580991 ZNF536O15090 1300 aa17.5■□□□□ 0.39
IFT20-211ENST00000580991 MINDY4BA8MYZ0 360 aa17.5■□□□□ 0.39
IFT20-211ENST00000580991 TMEM232C9JQI7 657 aa17.5■□□□□ 0.39
IFT20-211ENST00000580991 BAIAP3O94812 1187 aa17.5■□□□□ 0.39
IFT20-211ENST00000580991 TTLL1O95922 423 aa17.5■□□□□ 0.39
IFT20-211ENST00000580991 MRE11P49959 708 aa17.5■□□□□ 0.39
IFT20-211ENST00000580991 CPT1AP50416 773 aa17.5■□□□□ 0.39
IFT20-211ENST00000580991 SLFN13Q68D06 897 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms