RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 PDGFCQ9NRA1 345 aa22.84■■□□□ 1.25
NDEL1-209ENST00000580738 MTMR4Q9NYA4 1195 aa22.84■■□□□ 1.25
NDEL1-209ENST00000580738 KCNQ1P51787 676 aa22.83■■□□□ 1.25
NDEL1-209ENST00000580738 AP5M1Q9H0R1 490 aa22.83■■□□□ 1.25
NDEL1-209ENST00000580738 PCDHA11Q9Y5I1 949 aa22.83■■□□□ 1.25
NDEL1-209ENST00000580738 ZBBXA8MT70 800 aa22.82■■□□□ 1.24
NDEL1-209ENST00000580738 TMEM232C9JQI7 657 aa22.82■■□□□ 1.24
NDEL1-209ENST00000580738 RFXAPO00287 272 aa22.82■■□□□ 1.24
NDEL1-209ENST00000580738 BMP3P12645 472 aa22.82■■□□□ 1.24
NDEL1-209ENST00000580738 SLFN13Q68D06 897 aa22.82■■□□□ 1.24
NDEL1-209ENST00000580738 GIMAP6Q6P9H5 292 aa22.82■■□□□ 1.24
NDEL1-209ENST00000580738 ZNF444Q8N0Y2 327 aaPredicted RBP22.82■■□□□ 1.24
NDEL1-209ENST00000580738 GMCL1P1Q8NEA9 526 aa22.82■■□□□ 1.24
NDEL1-209ENST00000580738 OSBP2Q969R2 916 aa22.82■■□□□ 1.24
NDEL1-209ENST00000580738 CHMP4CQ96CF2 233 aa22.82■■□□□ 1.24
NDEL1-209ENST00000580738 EPB41L4AQ9HCS5 686 aaPredicted RBP22.82■■□□□ 1.24
NDEL1-209ENST00000580738 RNF146Q9NTX7 359 aa22.82■■□□□ 1.24
NDEL1-209ENST00000580738 ZBTB40Q9NUA8 1239 aa22.82■■□□□ 1.24
NDEL1-209ENST00000580738 TRANK1O15050 2925 aa22.82■■□□□ 1.24
NDEL1-209ENST00000580738 ZNF536O15090 1300 aa22.82■■□□□ 1.24
NDEL1-209ENST00000580738 ASB14A6NK59 587 aa22.81■■□□□ 1.24
NDEL1-209ENST00000580738 TTLL1O95922 423 aa22.81■■□□□ 1.24
NDEL1-209ENST00000580738 ATP2A2P16615 1042 aaKnown RBP22.81■■□□□ 1.24
NDEL1-209ENST00000580738 EEPD1Q7L9B9 569 aa22.81■■□□□ 1.24
NDEL1-209ENST00000580738 RPUSD2Q8IZ73 545 aaKnown RBP22.81■■□□□ 1.24
NDEL1-209ENST00000580738 COG6Q9Y2V7 657 aa22.81■■□□□ 1.24
NDEL1-209ENST00000580738 TCF20Q9UGU0 1960 aaKnown RBP22.81■■□□□ 1.24
NDEL1-209ENST00000580738 TTLL4Q14679 1199 aa22.8■■□□□ 1.24
NDEL1-209ENST00000580738 SKIV2LQ15477 1246 aaKnown RBP22.8■■□□□ 1.24
NDEL1-209ENST00000580738 TAPT1Q6NXT6 567 aa22.8■■□□□ 1.24
NDEL1-209ENST00000580738 C1QTNF1Q9BXJ1 281 aa22.8■■□□□ 1.24
NDEL1-209ENST00000580738 ISY1Q9ULR0 285 aaKnown RBP22.8■■□□□ 1.24
NDEL1-209ENST00000580738 SYNPO2Q9UMS6 1093 aa22.8■■□□□ 1.24
NDEL1-209ENST00000580738 MYH7P12883 1935 aa22.8■■□□□ 1.24
NDEL1-209ENST00000580738 SMARCA5O60264 1052 aaPredicted RBP22.79■■□□□ 1.24
NDEL1-209ENST00000580738 ZEB2O60315 1214 aa22.79■■□□□ 1.24
NDEL1-209ENST00000580738 HNRNPUQ00839 825 aaKnown RBP eCLIP22.79■■□□□ 1.24
NDEL1-209ENST00000580738 FBXO16Q8IX29 292 aaPredicted RBP22.79■■□□□ 1.24
NDEL1-209ENST00000580738 TRERF1Q96PN7 1200 aa22.79■■□□□ 1.24
NDEL1-209ENST00000580738 SEZ6LQ9BYH1 1024 aa22.79■■□□□ 1.24
NDEL1-209ENST00000580738 ALDH8A1Q9H2A2 487 aaPredicted RBP22.79■■□□□ 1.24
NDEL1-209ENST00000580738 CERS4Q9HA82 394 aa22.79■■□□□ 1.24
NDEL1-209ENST00000580738 MYH4Q9Y623 1939 aa22.78■■□□□ 1.24
NDEL1-209ENST00000580738 ERC2O15083 957 aa22.78■■□□□ 1.24
NDEL1-209ENST00000580738 CA3P07451 260 aa22.78■■□□□ 1.24
NDEL1-209ENST00000580738 FDX1P10109 184 aa22.78■■□□□ 1.24
NDEL1-209ENST00000580738 ALAS1P13196 640 aa22.78■■□□□ 1.24
NDEL1-209ENST00000580738 TDO2P48775 406 aa22.78■■□□□ 1.24
NDEL1-209ENST00000580738 STAT2P52630 851 aa22.78■■□□□ 1.24
NDEL1-209ENST00000580738 SNAP25P60880 206 aa22.78■■□□□ 1.24
NDEL1-209ENST00000580738 AAK1Q2M2I8 961 aa22.78■■□□□ 1.24
NDEL1-209ENST00000580738 IQSEC1Q6DN90 963 aa22.78■■□□□ 1.24
NDEL1-209ENST00000580738 PURBQ96QR8 312 aaKnown RBP22.78■■□□□ 1.24
NDEL1-209ENST00000580738 TRMT13Q9NUP7 481 aaKnown RBP22.78■■□□□ 1.24
NDEL1-209ENST00000580738 MTCH2Q9Y6C9 303 aa22.78■■□□□ 1.24
NDEL1-209ENST00000580738 CYP2C9P11712 490 aa22.77■■□□□ 1.24
NDEL1-209ENST00000580738 IKQ13123 557 aaPredicted RBP22.77■■□□□ 1.24
NDEL1-209ENST00000580738 MUM1L1Q5H9M0 696 aa22.77■■□□□ 1.24
NDEL1-209ENST00000580738 KRT40Q6A162 431 aa22.77■■□□□ 1.24
NDEL1-209ENST00000580738 DEFB128Q7Z7B8 93 aa22.77■■□□□ 1.24
NDEL1-209ENST00000580738 APPBP2Q92624 585 aa22.77■■□□□ 1.24
NDEL1-209ENST00000580738 ZNF287Q9HBT7 754 aa22.77■■□□□ 1.24
NDEL1-209ENST00000580738 Q9Y3F1 56 aa22.77■■□□□ 1.24
NDEL1-209ENST00000580738 PRRC2BQ5JSZ5 2229 aaKnown RBP22.77■■□□□ 1.24
NDEL1-209ENST00000580738 EPOPA6NHQ4 379 aa22.76■■□□□ 1.23
NDEL1-209ENST00000580738 GPAA1O43292 621 aa22.76■■□□□ 1.23
NDEL1-209ENST00000580738 APPP05067 770 aa22.76■■□□□ 1.23
NDEL1-209ENST00000580738 MCCP23508 829 aa22.76■■□□□ 1.23
NDEL1-209ENST00000580738 TMEM67Q5HYA8 995 aa22.76■■□□□ 1.23
NDEL1-209ENST00000580738 KBTBD3Q8NAB2 608 aa22.76■■□□□ 1.23
NDEL1-209ENST00000580738 NEDD1Q8NHV4 660 aa22.76■■□□□ 1.23
NDEL1-209ENST00000580738 CHURC1Q8WUH1 139 aa22.76■■□□□ 1.23
NDEL1-209ENST00000580738 STAG1Q8WVM7 1258 aa22.76■■□□□ 1.23
NDEL1-209ENST00000580738 LRRCC1Q9C099 1032 aa22.76■■□□□ 1.23
NDEL1-209ENST00000580738 EPHX3Q9H6B9 360 aa22.76■■□□□ 1.23
NDEL1-209ENST00000580738 CYP39A1Q9NYL5 469 aa22.76■■□□□ 1.23
NDEL1-209ENST00000580738 DDX19BQ9UMR2 479 aa22.76■■□□□ 1.23
NDEL1-209ENST00000580738 M0R2C6 588 aa22.75■■□□□ 1.23
NDEL1-209ENST00000580738 TSPY3P0CV98 308 aa22.75■■□□□ 1.23
NDEL1-209ENST00000580738 TSPY8P0CW00 308 aa22.75■■□□□ 1.23
NDEL1-209ENST00000580738 POU3F3P20264 500 aaPredicted RBP22.75■■□□□ 1.23
NDEL1-209ENST00000580738 TKFCQ3LXA3 575 aa22.75■■□□□ 1.23
NDEL1-209ENST00000580738 KIAA1211Q6ZU35 1233 aa22.75■■□□□ 1.23
NDEL1-209ENST00000580738 FAM160B2Q86V87 743 aa22.75■■□□□ 1.23
NDEL1-209ENST00000580738 GMCL1Q96IK5 515 aa22.75■■□□□ 1.23
NDEL1-209ENST00000580738 ECHDC1Q9NTX5 307 aa22.75■■□□□ 1.23
NDEL1-209ENST00000580738 LRRC37A2A6NM11 1700 aa22.74■■□□□ 1.23
NDEL1-209ENST00000580738 RNF113AO15541 343 aaKnown RBP22.74■■□□□ 1.23
NDEL1-209ENST00000580738 ARHGEF15O94989 841 aa22.74■■□□□ 1.23
NDEL1-209ENST00000580738 HOXD11P31277 338 aaPredicted RBP22.74■■□□□ 1.23
NDEL1-209ENST00000580738 SLC1A4P43007 532 aa22.74■■□□□ 1.23
NDEL1-209ENST00000580738 TFAP4Q01664 338 aa22.74■■□□□ 1.23
NDEL1-209ENST00000580738 KCTD1Q719H9 257 aa22.74■■□□□ 1.23
NDEL1-209ENST00000580738 TNKSO95271 1327 aa22.74■■□□□ 1.23
NDEL1-209ENST00000580738 PLIN4Q96Q06 1357 aa22.74■■□□□ 1.23
NDEL1-209ENST00000580738 GTPBP6O43824 516 aaPredicted RBP22.73■■□□□ 1.23
NDEL1-209ENST00000580738 PFKMP08237 780 aa22.73■■□□□ 1.23
NDEL1-209ENST00000580738 MS4A1P11836 297 aa22.73■■□□□ 1.23
NDEL1-209ENST00000580738 TSHZ3Q63HK5 1081 aa22.73■■□□□ 1.23
NDEL1-209ENST00000580738 NSMFQ6X4W1 530 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms