RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 EEPD1Q7L9B9 569 aa17.12■□□□□ 0.33
CSNK1D-213ENST00000580446 FBXO22Q8NEZ5 403 aa17.12■□□□□ 0.33
CSNK1D-213ENST00000580446 ARHGEF10LQ9HCE6 1279 aa17.12■□□□□ 0.33
CSNK1D-213ENST00000580446 GNEQ9Y223 722 aaKnown RBP17.12■□□□□ 0.33
CSNK1D-213ENST00000580446 MYO15AQ9UKN7 3530 aa17.12■□□□□ 0.33
CSNK1D-213ENST00000580446 MYH1P12882 1939 aa17.11■□□□□ 0.33
CSNK1D-213ENST00000580446 IDH1O75874 414 aaKnown RBP17.11■□□□□ 0.33
CSNK1D-213ENST00000580446 NKX3-2P78367 333 aa17.11■□□□□ 0.33
CSNK1D-213ENST00000580446 FBXL6Q8N531 539 aa17.11■□□□□ 0.33
CSNK1D-213ENST00000580446 MAGEB6Q8N7X4 407 aa17.11■□□□□ 0.33
CSNK1D-213ENST00000580446 CRBNQ96SW2 442 aa17.11■□□□□ 0.33
CSNK1D-213ENST00000580446 TRPC6Q9Y210 931 aa17.11■□□□□ 0.33
CSNK1D-213ENST00000580446 PTPRCP08575 1304 aa17.11■□□□□ 0.33
CSNK1D-213ENST00000580446 PTPRSQ13332 1948 aa17.1■□□□□ 0.33
CSNK1D-213ENST00000580446 KMT2BQ9UMN6 2715 aaPredicted RBP17.1■□□□□ 0.33
CSNK1D-213ENST00000580446 PRR23AA6NEV1 266 aa17.1■□□□□ 0.33
CSNK1D-213ENST00000580446 SRGAP3O43295 1099 aa17.1■□□□□ 0.33
CSNK1D-213ENST00000580446 CSPG5O95196 566 aa17.1■□□□□ 0.33
CSNK1D-213ENST00000580446 DLX2Q07687 328 aaPredicted RBP17.1■□□□□ 0.33
CSNK1D-213ENST00000580446 TMEM179Q6ZVK1 233 aa17.1■□□□□ 0.33
CSNK1D-213ENST00000580446 ZNF467Q7Z7K2 595 aaPredicted RBP17.1■□□□□ 0.33
CSNK1D-213ENST00000580446 ANKRD35Q8N283 1001 aa17.1■□□□□ 0.33
CSNK1D-213ENST00000580446 SSH1Q8WYL5 1049 aa17.1■□□□□ 0.33
CSNK1D-213ENST00000580446 MEIS3Q99687 375 aa17.1■□□□□ 0.33
CSNK1D-213ENST00000580446 DBNDD2Q9BQY9 259 aa17.1■□□□□ 0.33
CSNK1D-213ENST00000580446 TEX13BQ9BXU2 312 aa17.1■□□□□ 0.33
CSNK1D-213ENST00000580446 RAVER2Q9HCJ3 691 aaKnown RBP17.1■□□□□ 0.33
CSNK1D-213ENST00000580446 HOMER2Q9NSB8 354 aa17.1■□□□□ 0.33
CSNK1D-213ENST00000580446 E9PSI1 815 aa17.09■□□□□ 0.33
CSNK1D-213ENST00000580446 CHMP4BP1P59074 171 aa17.09■□□□□ 0.33
CSNK1D-213ENST00000580446 BMP8AQ7Z5Y6 402 aa17.09■□□□□ 0.33
CSNK1D-213ENST00000580446 FBXO16Q8IX29 292 aaPredicted RBP17.09■□□□□ 0.33
CSNK1D-213ENST00000580446 RETREG2Q8NC44 543 aa17.09■□□□□ 0.33
CSNK1D-213ENST00000580446 BANK1Q8NDB2 785 aa17.09■□□□□ 0.33
CSNK1D-213ENST00000580446 PABPC5Q96DU9 382 aaKnown RBP17.09■□□□□ 0.33
CSNK1D-213ENST00000580446 MRPL38Q96DV4 380 aaKnown RBP17.09■□□□□ 0.33
CSNK1D-213ENST00000580446 FSD1Q9BTV5 496 aa17.09■□□□□ 0.33
CSNK1D-213ENST00000580446 MCM9Q9NXL9 1143 aa17.09■□□□□ 0.33
CSNK1D-213ENST00000580446 FAM50BQ9Y247 325 aa17.09■□□□□ 0.33
CSNK1D-213ENST00000580446 PARP14Q460N5 1801 aa17.09■□□□□ 0.33
CSNK1D-213ENST00000580446 GVINP1Q7Z2Y8 2422 aa17.09■□□□□ 0.33
CSNK1D-213ENST00000580446 WDR87Q6ZQQ6 2873 aa17.09■□□□□ 0.33
CSNK1D-213ENST00000580446 MCM3APO60318 1980 aa17.08■□□□□ 0.33
CSNK1D-213ENST00000580446 KDM4AO75164 1064 aa17.08■□□□□ 0.32
CSNK1D-213ENST00000580446 MYL3P08590 195 aa17.08■□□□□ 0.32
CSNK1D-213ENST00000580446 EEF2P13639 858 aaKnown RBP17.08■□□□□ 0.32
CSNK1D-213ENST00000580446 RFC2P35250 354 aa17.08■□□□□ 0.32
CSNK1D-213ENST00000580446 COPB2P35606 906 aa17.08■□□□□ 0.32
CSNK1D-213ENST00000580446 LTBRP36941 435 aa17.08■□□□□ 0.32
CSNK1D-213ENST00000580446 GPNMBQ14956 572 aa17.08■□□□□ 0.32
CSNK1D-213ENST00000580446 RPAINQ86UA6 219 aa17.08■□□□□ 0.32
CSNK1D-213ENST00000580446 PRRX2Q99811 253 aa17.08■□□□□ 0.32
CSNK1D-213ENST00000580446 ZFHX4Q86UP3 3567 aa17.08■□□□□ 0.32
CSNK1D-213ENST00000580446 PLXNA3P51805 1871 aa17.07■□□□□ 0.32
CSNK1D-213ENST00000580446 ZEB2O60315 1214 aa17.07■□□□□ 0.32
CSNK1D-213ENST00000580446 BAIAP3O94812 1187 aa17.07■□□□□ 0.32
CSNK1D-213ENST00000580446 GJB5O95377 273 aa17.07■□□□□ 0.32
CSNK1D-213ENST00000580446 SUPT20HL2P0C7V6 817 aa17.07■□□□□ 0.32
CSNK1D-213ENST00000580446 CNTNAP3BQ96NU0 1288 aa17.07■□□□□ 0.32
CSNK1D-213ENST00000580446 RAD9AQ99638 391 aa17.07■□□□□ 0.32
CSNK1D-213ENST00000580446 CNTNAP3Q9BZ76 1288 aa17.07■□□□□ 0.32
CSNK1D-213ENST00000580446 KMT2EQ8IZD2 1858 aa17.06■□□□□ 0.32
CSNK1D-213ENST00000580446 STXBP3O00186 592 aa17.06■□□□□ 0.32
CSNK1D-213ENST00000580446 ZXDAP98168 799 aa17.06■□□□□ 0.32
CSNK1D-213ENST00000580446 MKRN4PQ13434 485 aaPredicted RBP17.06■□□□□ 0.32
CSNK1D-213ENST00000580446 SMAD2Q15796 467 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-213ENST00000580446 SLF1Q9BQI6 1058 aa17.06■□□□□ 0.32
CSNK1D-213ENST00000580446 SH2D4AQ9H788 454 aa17.06■□□□□ 0.32
CSNK1D-213ENST00000580446 TET1Q8NFU7 2136 aa17.06■□□□□ 0.32
CSNK1D-213ENST00000580446 MYO5AQ9Y4I1 1855 aaKnown RBP17.05■□□□□ 0.32
CSNK1D-213ENST00000580446 CYP2D7A0A087X1C5 515 aa17.05■□□□□ 0.32
CSNK1D-213ENST00000580446 MBTPS2O43462 519 aa17.05■□□□□ 0.32
CSNK1D-213ENST00000580446 PDGFBP01127 241 aaPredicted RBP17.05■□□□□ 0.32
CSNK1D-213ENST00000580446 AVPR2P30518 371 aa17.05■□□□□ 0.32
CSNK1D-213ENST00000580446 NBPF20Q3BBV1 942 aa17.05■□□□□ 0.32
CSNK1D-213ENST00000580446 TIGD5Q53EQ6 642 aa17.05■□□□□ 0.32
CSNK1D-213ENST00000580446 SDR42E1Q8WUS8 393 aa17.05■□□□□ 0.32
CSNK1D-213ENST00000580446 ANTXR1Q9H6X2 564 aa17.05■□□□□ 0.32
CSNK1D-213ENST00000580446 FAM186AA6NE01 2351 aa17.04■□□□□ 0.32
CSNK1D-213ENST00000580446 GTF2F1P35269 517 aaKnown RBP eCLIP17.04■□□□□ 0.321e-7■■■■■ 38.7
CSNK1D-213ENST00000580446 POP1Q99575 1024 aaKnown RBP17.04■□□□□ 0.32
CSNK1D-213ENST00000580446 RIOK1Q9BRS2 568 aaKnown RBP17.04■□□□□ 0.32
CSNK1D-213ENST00000580446 TLR7Q9NYK1 1049 aaKnown RBP17.04■□□□□ 0.32
CSNK1D-213ENST00000580446 LINC01565O15544 149 aa17.03■□□□□ 0.32
CSNK1D-213ENST00000580446 PURAQ00577 322 aaKnown RBP17.03■□□□□ 0.32
CSNK1D-213ENST00000580446 PTPROQ16827 1216 aa17.03■□□□□ 0.32
CSNK1D-213ENST00000580446 EPC2Q52LR7 807 aa17.03■□□□□ 0.32
CSNK1D-213ENST00000580446 TAPT1Q6NXT6 567 aa17.03■□□□□ 0.32
CSNK1D-213ENST00000580446 FRMD5Q7Z6J6 570 aa17.03■□□□□ 0.32
CSNK1D-213ENST00000580446 ADSSL1Q8N142 457 aa17.03■□□□□ 0.32
CSNK1D-213ENST00000580446 FAM133AQ8N9E0 248 aa17.03■□□□□ 0.32
CSNK1D-213ENST00000580446 PURBQ96QR8 312 aaKnown RBP17.03■□□□□ 0.32
CSNK1D-213ENST00000580446 NOD1Q9Y239 953 aa17.03■□□□□ 0.32
CSNK1D-213ENST00000580446 BAHCC1Q9P281 2608 aa17.03■□□□□ 0.32
CSNK1D-213ENST00000580446 DMDP11532 3685 aa17.03■□□□□ 0.32
CSNK1D-213ENST00000580446 PROB1E7EW31 1015 aa17.02■□□□□ 0.32
CSNK1D-213ENST00000580446 PITPNM1O00562 1244 aa17.02■□□□□ 0.32
CSNK1D-213ENST00000580446 GPM6BQ13491 265 aa17.02■□□□□ 0.32
CSNK1D-213ENST00000580446 COL19A1Q14993 1142 aa17.02■□□□□ 0.32
CSNK1D-213ENST00000580446 CCDC158Q5M9N0 1113 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms