RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 TJP1Q07157 1748 aa8.87□□□□□ -0.99
PPP4R1-216ENST00000580283 ANKRD26Q9UPS8 1709 aa8.87□□□□□ -0.99
PPP4R1-216ENST00000580283 CNTNAP1P78357 1384 aa8.86□□□□□ -0.99
PPP4R1-216ENST00000580283 TONSLQ96HA7 1378 aa8.86□□□□□ -0.99
PPP4R1-216ENST00000580283 CNTNAP4Q9C0A0 1308 aa8.86□□□□□ -0.99
PPP4R1-216ENST00000580283 CACNA1SQ13698 1873 aa8.86□□□□□ -0.99
PPP4R1-216ENST00000580283 PRR19A6NJB7 356 aa8.86□□□□□ -0.99
PPP4R1-216ENST00000580283 RLBP1P12271 317 aa8.86□□□□□ -0.99
PPP4R1-216ENST00000580283 ST13P50502 369 aaKnown RBP8.86□□□□□ -0.99
PPP4R1-216ENST00000580283 LBX1P52954 281 aa8.86□□□□□ -0.99
PPP4R1-216ENST00000580283 MFAP1P55081 439 aaKnown RBP8.86□□□□□ -0.99
PPP4R1-216ENST00000580283 NBPF11Q86T75 865 aa8.86□□□□□ -0.99
PPP4R1-216ENST00000580283 SMG6Q86US8 1419 aaKnown RBP8.86□□□□□ -0.99
PPP4R1-216ENST00000580283 FLT4P35916 1363 aa8.86□□□□□ -0.99
PPP4R1-216ENST00000580283 PASKQ96RG2 1323 aa8.85□□□□□ -0.99
PPP4R1-216ENST00000580283 USP42Q9H9J4 1324 aaKnown RBP8.85□□□□□ -0.99
PPP4R1-216ENST00000580283 DYNC1LI2O43237 492 aaPredicted RBP8.85□□□□□ -0.99
PPP4R1-216ENST00000580283 CTSHP09668 335 aa8.85□□□□□ -0.99
PPP4R1-216ENST00000580283 CD97P48960 835 aa8.85□□□□□ -0.99
PPP4R1-216ENST00000580283 CTCFP49711 727 aaPredicted RBP8.85□□□□□ -0.99
PPP4R1-216ENST00000580283 LIG3P49916 1009 aa8.85□□□□□ -0.99
PPP4R1-216ENST00000580283 PPM1JQ5JR12 505 aa8.85□□□□□ -0.99
PPP4R1-216ENST00000580283 SEZ6L2Q6UXD5 910 aa8.85□□□□□ -0.99
PPP4R1-216ENST00000580283 C12orf40Q86WS4 652 aa8.85□□□□□ -0.99
PPP4R1-216ENST00000580283 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.85□□□□□ -0.99
PPP4R1-216ENST00000580283 NOC4LQ9BVI4 516 aaKnown RBP8.85□□□□□ -0.99
PPP4R1-216ENST00000580283 CARD11Q9BXL7 1154 aa8.85□□□□□ -0.99
PPP4R1-216ENST00000580283 C1GALT1Q9NS00 363 aa8.85□□□□□ -0.99
PPP4R1-216ENST00000580283 FAM170BA6NMN3 283 aa8.84□□□□□ -0.99
PPP4R1-216ENST00000580283 CRKLP46109 303 aaKnown RBP8.84□□□□□ -0.99
PPP4R1-216ENST00000580283 DIEXFQ68CQ4 756 aaKnown RBP8.84□□□□□ -0.99
PPP4R1-216ENST00000580283 IFNL2Q8IZJ0 200 aa8.84□□□□□ -0.99
PPP4R1-216ENST00000580283 SHISA5Q8N114 240 aa8.84□□□□□ -0.99
PPP4R1-216ENST00000580283 GATA6Q92908 595 aa8.84□□□□□ -0.99
PPP4R1-216ENST00000580283 ISL2Q96A47 359 aa8.84□□□□□ -0.99
PPP4R1-216ENST00000580283 SCN4AP35499 1836 aa8.84□□□□□ -0.99
PPP4R1-216ENST00000580283 SLX4Q8IY92 1834 aa8.84□□□□□ -0.99
PPP4R1-216ENST00000580283 CASP8AP2Q9UKL3 1982 aa8.83□□□□□ -1
PPP4R1-216ENST00000580283 NEFMP07197 916 aa8.83□□□□□ -1
PPP4R1-216ENST00000580283 HSPA8P11142 646 aaKnown RBP8.83□□□□□ -1
PPP4R1-216ENST00000580283 CDK5R2Q13319 367 aa8.83□□□□□ -1
PPP4R1-216ENST00000580283 CYP27C1Q4G0S4 372 aa8.83□□□□□ -1
PPP4R1-216ENST00000580283 AGMOQ6ZNB7 445 aa8.83□□□□□ -1
PPP4R1-216ENST00000580283 CDC37L1Q7L3B6 337 aa8.83□□□□□ -1
PPP4R1-216ENST00000580283 HDXQ7Z353 690 aa8.83□□□□□ -1
PPP4R1-216ENST00000580283 MIR1-1HGQ9H1L0 117 aa8.83□□□□□ -1
PPP4R1-216ENST00000580283 PDE4DIPQ5VU43 2346 aa8.83□□□□□ -1
PPP4R1-216ENST00000580283 ADAMTSL1Q8N6G6 1762 aa8.83□□□□□ -1
PPP4R1-216ENST00000580283 KIF24Q5T7B8 1368 aa8.83□□□□□ -1
PPP4R1-216ENST00000580283 ST20-MTHFSA0A0A6YYL1 179 aa8.82□□□□□ -1
PPP4R1-216ENST00000580283 PRAMEF27A3QJZ7 478 aa8.82□□□□□ -1
PPP4R1-216ENST00000580283 ERVV-2B6SEH9 535 aa8.82□□□□□ -1
PPP4R1-216ENST00000580283 FANCGO15287 622 aa8.82□□□□□ -1
PPP4R1-216ENST00000580283 CYP26A1O43174 497 aa8.82□□□□□ -1
PPP4R1-216ENST00000580283 DDNO94850 711 aaPredicted RBP8.82□□□□□ -1
PPP4R1-216ENST00000580283 PTPN11Q06124 597 aaPredicted RBP8.82□□□□□ -1
PPP4R1-216ENST00000580283 SEPT6Q14141 434 aa8.82□□□□□ -1
PPP4R1-216ENST00000580283 OGFOD3Q6PK18 319 aa8.82□□□□□ -1
PPP4R1-216ENST00000580283 ZNF765Q7L2R6 523 aa8.82□□□□□ -1
PPP4R1-216ENST00000580283 GAL3ST3Q96A11 431 aa8.82□□□□□ -1
PPP4R1-216ENST00000580283 COL11A2P13942 1736 aaPredicted RBP8.82□□□□□ -1
PPP4R1-216ENST00000580283 WASHC2AQ641Q2 1341 aa8.81□□□□□ -1
PPP4R1-216ENST00000580283 SCN11AQ9UI33 1791 aa8.81□□□□□ -1
PPP4R1-216ENST00000580283 FOSL1P15407 271 aa8.81□□□□□ -1
PPP4R1-216ENST00000580283 INPP5AQ14642 412 aa8.81□□□□□ -1
PPP4R1-216ENST00000580283 NFIXQ14938 502 aa8.81□□□□□ -1
PPP4R1-216ENST00000580283 WIPI1Q5MNZ9 446 aaPredicted RBP8.81□□□□□ -1
PPP4R1-216ENST00000580283 LRFN4Q6PJG9 635 aa8.81□□□□□ -1
PPP4R1-216ENST00000580283 KCT2Q8NC54 265 aa8.81□□□□□ -1
PPP4R1-216ENST00000580283 PLPPR2Q96GM1 343 aa8.81□□□□□ -1
PPP4R1-216ENST00000580283 LRRC4CQ9HCJ2 640 aa8.81□□□□□ -1
PPP4R1-216ENST00000580283 PCDHB5Q9Y5E4 795 aa8.81□□□□□ -1
PPP4R1-216ENST00000580283 CARMIL3Q8ND23 1372 aa8.81□□□□□ -1
PPP4R1-216ENST00000580283 KIAA1324LA8MWY0 1029 aaPredicted RBP8.8□□□□□ -1
PPP4R1-216ENST00000580283 MED26O95402 600 aa8.8□□□□□ -1
PPP4R1-216ENST00000580283 FAM87AP0C7U9 286 aa8.8□□□□□ -1
PPP4R1-216ENST00000580283 HOXA10P31260 410 aaPredicted RBP8.8□□□□□ -1
PPP4R1-216ENST00000580283 XP32Q5T750 250 aa8.8□□□□□ -1
PPP4R1-216ENST00000580283 ZBTB37Q5TC79 503 aa8.8□□□□□ -1
PPP4R1-216ENST00000580283 RELL1Q8IUW5 271 aa8.8□□□□□ -1
PPP4R1-216ENST00000580283 TTLL6Q8N841 843 aa8.8□□□□□ -1
PPP4R1-216ENST00000580283 SNCAIPQ9Y6H5 919 aa8.8□□□□□ -1
PPP4R1-216ENST00000580283 SERPINB2P05120 415 aa8.79□□□□□ -1
PPP4R1-216ENST00000580283 RING1Q06587 406 aa8.79□□□□□ -1
PPP4R1-216ENST00000580283 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.79□□□□□ -1
PPP4R1-216ENST00000580283 C2CD5Q86YS7 1000 aa8.79□□□□□ -1
PPP4R1-216ENST00000580283 ZNF507Q8TCN5 953 aa8.79□□□□□ -1
PPP4R1-216ENST00000580283 TLR6Q9Y2C9 796 aa8.79□□□□□ -1
PPP4R1-216ENST00000580283 ARFGEF2Q9Y6D5 1785 aa8.78□□□□□ -1
PPP4R1-216ENST00000580283 RASSF10A6NK89 507 aa8.78□□□□□ -1
PPP4R1-216ENST00000580283 CCDC85CA6NKD9 419 aa8.78□□□□□ -1
PPP4R1-216ENST00000580283 PPM1GO15355 546 aaPredicted RBP8.78□□□□□ -1
PPP4R1-216ENST00000580283 TFE3P19532 575 aaPredicted RBP8.78□□□□□ -1
PPP4R1-216ENST00000580283 ETF1P62495 437 aaKnown RBP8.78□□□□□ -1
PPP4R1-216ENST00000580283 TRIM26Q12899 539 aaPredicted RBP8.78□□□□□ -1
PPP4R1-216ENST00000580283 PWP1Q13610 501 aa8.78□□□□□ -1
PPP4R1-216ENST00000580283 JARID2Q92833 1246 aaPredicted RBP8.78□□□□□ -1
PPP4R1-216ENST00000580283 POLKQ9UBT6 870 aa8.78□□□□□ -1
PPP4R1-216ENST00000580283 THSD7BQ9C0I4 1608 aa8.78□□□□□ -1
PPP4R1-216ENST00000580283 TRPM7Q96QT4 1865 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms