RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 MTA3Q9BTC8 594 aa21.76■■□□□ 1.07
PPP4R1-215ENST00000580182 DDX49Q9Y6V7 483 aaKnown RBP21.76■■□□□ 1.07
PPP4R1-215ENST00000580182 WDR19Q8NEZ3 1342 aa21.76■■□□□ 1.07
PPP4R1-215ENST00000580182 HSPA4P34932 840 aa21.75■■□□□ 1.07
PPP4R1-215ENST00000580182 MAMDC4Q6UXC1 1216 aa21.75■■□□□ 1.07
PPP4R1-215ENST00000580182 NFXL1Q6ZNB6 911 aa21.75■■□□□ 1.07
PPP4R1-215ENST00000580182 ZNF467Q7Z7K2 595 aaPredicted RBP21.75■■□□□ 1.07
PPP4R1-215ENST00000580182 KCNB2Q92953 911 aa21.75■■□□□ 1.07
PPP4R1-215ENST00000580182 PAWRQ96IZ0 340 aaKnown RBP21.75■■□□□ 1.07
PPP4R1-215ENST00000580182 ASTN1O14525 1302 aa21.75■■□□□ 1.07
PPP4R1-215ENST00000580182 PFASO15067 1338 aa21.75■■□□□ 1.07
PPP4R1-215ENST00000580182 FRMPD3Q5JV73 1810 aa21.74■■□□□ 1.07
PPP4R1-215ENST00000580182 SEPT4O43236 478 aa21.74■■□□□ 1.07
PPP4R1-215ENST00000580182 REC8O95072 547 aa21.74■■□□□ 1.07
PPP4R1-215ENST00000580182 ZNF865P0CJ78 1059 aaPredicted RBP21.74■■□□□ 1.07
PPP4R1-215ENST00000580182 CPA1P15085 419 aa21.74■■□□□ 1.07
PPP4R1-215ENST00000580182 EXOSC10Q01780 885 aaKnown RBP21.74■■□□□ 1.07
PPP4R1-215ENST00000580182 BAATQ14032 418 aaPredicted RBP21.74■■□□□ 1.07
PPP4R1-215ENST00000580182 RAB11FIP4Q86YS3 637 aa21.74■■□□□ 1.07
PPP4R1-215ENST00000580182 SNX14Q9Y5W7 946 aa21.74■■□□□ 1.07
PPP4R1-215ENST00000580182 LCTP09848 1927 aa21.74■■□□□ 1.07
PPP4R1-215ENST00000580182 SYNGAP1Q96PV0 1343 aa21.74■■□□□ 1.07
PPP4R1-215ENST00000580182 PTPDC1A2A3K4 754 aa21.73■■□□□ 1.07
PPP4R1-215ENST00000580182 CCDC69A6NI79 296 aa21.73■■□□□ 1.07
PPP4R1-215ENST00000580182 CYTH3O43739 400 aa21.73■■□□□ 1.07
PPP4R1-215ENST00000580182 RXRAP19793 462 aa21.73■■□□□ 1.07
PPP4R1-215ENST00000580182 LIFRP42702 1097 aa21.73■■□□□ 1.07
PPP4R1-215ENST00000580182 SLC30A10Q6XR72 485 aa21.73■■□□□ 1.07
PPP4R1-215ENST00000580182 ARMCX2Q7L311 632 aa21.73■■□□□ 1.07
PPP4R1-215ENST00000580182 CCDC144CPQ8IYA2 1237 aa21.73■■□□□ 1.07
PPP4R1-215ENST00000580182 MSL3Q8N5Y2 521 aaKnown RBP21.73■■□□□ 1.07
PPP4R1-215ENST00000580182 MTMR8Q96EF0 704 aa21.73■■□□□ 1.07
PPP4R1-215ENST00000580182 PPP1R11O60927 126 aaPredicted RBP21.72■■□□□ 1.07
PPP4R1-215ENST00000580182 DDAH1O94760 285 aa21.72■■□□□ 1.07
PPP4R1-215ENST00000580182 CAPN2P17655 700 aa21.72■■□□□ 1.07
PPP4R1-215ENST00000580182 KRT32Q14532 448 aa21.72■■□□□ 1.07
PPP4R1-215ENST00000580182 DHX32Q7L7V1 743 aaKnown RBP21.72■■□□□ 1.07
PPP4R1-215ENST00000580182 FBXO11Q86XK2 927 aa21.72■■□□□ 1.07
PPP4R1-215ENST00000580182 TMTC2Q8N394 836 aa21.72■■□□□ 1.07
PPP4R1-215ENST00000580182 ANKLE1Q8NAG6 615 aa21.72■■□□□ 1.07
PPP4R1-215ENST00000580182 TBC1D5Q92609 795 aa21.72■■□□□ 1.07
PPP4R1-215ENST00000580182 PIGSQ96S52 555 aa21.72■■□□□ 1.07
PPP4R1-215ENST00000580182 RIOX1Q9H6W3 641 aa21.72■■□□□ 1.07
PPP4R1-215ENST00000580182 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.72■■□□□ 1.07
PPP4R1-215ENST00000580182 NRBP1Q9UHY1 535 aa21.72■■□□□ 1.07
PPP4R1-215ENST00000580182 PNMA2Q9UL42 364 aa21.72■■□□□ 1.07
PPP4R1-215ENST00000580182 CNPY2Q9Y2B0 182 aa21.72■■□□□ 1.07
PPP4R1-215ENST00000580182 MCM3APO60318 1980 aa21.72■■□□□ 1.07
PPP4R1-215ENST00000580182 MSCO60682 206 aa21.71■■□□□ 1.07
PPP4R1-215ENST00000580182 CALML3P27482 149 aa21.71■■□□□ 1.07
PPP4R1-215ENST00000580182 RNF207Q6ZRF8 634 aa21.71■■□□□ 1.07
PPP4R1-215ENST00000580182 HOMER1Q86YM7 354 aa21.71■■□□□ 1.07
PPP4R1-215ENST00000580182 LENG1Q96BZ8 264 aaPredicted RBP21.71■■□□□ 1.07
PPP4R1-215ENST00000580182 JAKMIP1Q96N16 626 aaKnown RBP21.71■■□□□ 1.07
PPP4R1-215ENST00000580182 ZHX1Q9UKY1 873 aaPredicted RBP21.71■■□□□ 1.07
PPP4R1-215ENST00000580182 ZBTB5O15062 677 aa21.7■■□□□ 1.06
PPP4R1-215ENST00000580182 RPS6P62753 249 aaKnown RBP21.7■■□□□ 1.06
PPP4R1-215ENST00000580182 ACVR2BQ13705 512 aa21.7■■□□□ 1.06
PPP4R1-215ENST00000580182 NECAB2Q7Z6G3 386 aa21.7■■□□□ 1.06
PPP4R1-215ENST00000580182 CTCFLQ8NI51 663 aaPredicted RBP21.7■■□□□ 1.06
PPP4R1-215ENST00000580182 PIBF1Q8WXW3 757 aa21.7■■□□□ 1.06
PPP4R1-215ENST00000580182 USP26Q9BXU7 913 aa21.7■■□□□ 1.06
PPP4R1-215ENST00000580182 KATNBL1Q9H079 304 aa21.7■■□□□ 1.06
PPP4R1-215ENST00000580182 ABCB11O95342 1321 aa21.7■■□□□ 1.06
PPP4R1-215ENST00000580182 MYH6P13533 1939 aa21.7■■□□□ 1.06
PPP4R1-215ENST00000580182 PLEKHA8P1O95397 391 aa21.69■■□□□ 1.06
PPP4R1-215ENST00000580182 GJC2Q5T442 439 aaPredicted RBP21.69■■□□□ 1.06
PPP4R1-215ENST00000580182 SGMS1Q86VZ5 419 aa21.69■■□□□ 1.06
PPP4R1-215ENST00000580182 CMTR1Q8N1G2 835 aaKnown RBP21.69■■□□□ 1.06
PPP4R1-215ENST00000580182 MAP3K14Q99558 947 aa21.69■■□□□ 1.06
PPP4R1-215ENST00000580182 AMNQ9BXJ7 453 aa21.69■■□□□ 1.06
PPP4R1-215ENST00000580182 C11orf49Q9H6J7 331 aa21.69■■□□□ 1.06
PPP4R1-215ENST00000580182 BRPF3Q9ULD4 1205 aa21.69■■□□□ 1.06
PPP4R1-215ENST00000580182 SLC12A7Q9Y666 1083 aa21.69■■□□□ 1.06
PPP4R1-215ENST00000580182 BAZ2BQ9UIF8 2168 aaKnown RBP21.69■■□□□ 1.06
PPP4R1-215ENST00000580182 ASB14A6NK59 587 aa21.68■■□□□ 1.06
PPP4R1-215ENST00000580182 ABHD16BQ9H3Z7 469 aa21.68■■□□□ 1.06
PPP4R1-215ENST00000580182 PDE4DIPQ5VU43 2346 aa21.68■■□□□ 1.06
PPP4R1-215ENST00000580182 OPLAHO14841 1288 aa21.67■■□□□ 1.06
PPP4R1-215ENST00000580182 ADCY6O43306 1168 aa21.67■■□□□ 1.06
PPP4R1-215ENST00000580182 MYCNP04198 464 aaPredicted RBP21.67■■□□□ 1.06
PPP4R1-215ENST00000580182 HMGB1P09429 215 aaKnown RBP21.67■■□□□ 1.06
PPP4R1-215ENST00000580182 AKR1A1P14550 325 aa21.67■■□□□ 1.06
PPP4R1-215ENST00000580182 KIF5BP33176 963 aa21.67■■□□□ 1.06
PPP4R1-215ENST00000580182 ALDH5A1P51649 535 aaPredicted RBP21.67■■□□□ 1.06
PPP4R1-215ENST00000580182 EEPD1Q7L9B9 569 aa21.67■■□□□ 1.06
PPP4R1-215ENST00000580182 MICU3Q86XE3 530 aa21.67■■□□□ 1.06
PPP4R1-215ENST00000580182 SRBD1Q8N5C6 995 aaKnown RBP21.67■■□□□ 1.06
PPP4R1-215ENST00000580182 DPF3Q92784 378 aa21.67■■□□□ 1.06
PPP4R1-215ENST00000580182 FAM184BQ9ULE4 1060 aa21.67■■□□□ 1.06
PPP4R1-215ENST00000580182 MRPL11Q9Y3B7 192 aaKnown RBP21.67■■□□□ 1.06
PPP4R1-215ENST00000580182 PCDHA1Q9Y5I3 950 aa21.67■■□□□ 1.06
PPP4R1-215ENST00000580182 EPB41L2O43491 1005 aaKnown RBP21.66■■□□□ 1.06
PPP4R1-215ENST00000580182 CALM1P0DP23 149 aa21.66■■□□□ 1.06
PPP4R1-215ENST00000580182 CALM2P0DP24 149 aa21.66■■□□□ 1.06
PPP4R1-215ENST00000580182 CALM3P0DP25 149 aa21.66■■□□□ 1.06
PPP4R1-215ENST00000580182 RARBP10826 455 aa21.66■■□□□ 1.06
PPP4R1-215ENST00000580182 COL6A1P12109 1028 aa21.66■■□□□ 1.06
PPP4R1-215ENST00000580182 CCDC144BQ3MJ40 725 aa21.66■■□□□ 1.06
PPP4R1-215ENST00000580182 APOA5Q6Q788 366 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms