RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 RAB30Q15771 203 aa21.15■□□□□ 0.98
MKS1-209ENST00000580127 CXCL17Q6UXB2 119 aa21.15■□□□□ 0.98
MKS1-209ENST00000580127 ZNF365Q70YC5 407 aa21.15■□□□□ 0.98
MKS1-209ENST00000580127 TLK2Q86UE8 772 aa21.15■□□□□ 0.98
MKS1-209ENST00000580127 RPUSD2Q8IZ73 545 aaKnown RBP21.15■□□□□ 0.98
MKS1-209ENST00000580127 PI4K2BQ8TCG2 481 aa21.15■□□□□ 0.98
MKS1-209ENST00000580127 CHMP4CQ96CF2 233 aa21.15■□□□□ 0.98
MKS1-209ENST00000580127 MPHOSPH6Q99547 160 aaKnown RBP21.15■□□□□ 0.98
MKS1-209ENST00000580127 KATNBL1Q9H079 304 aa21.15■□□□□ 0.98
MKS1-209ENST00000580127 IL23AQ9NPF7 189 aa21.15■□□□□ 0.98
MKS1-209ENST00000580127 CCPG1Q9ULG6 757 aa21.15■□□□□ 0.98
MKS1-209ENST00000580127 PRR12Q9ULL5 1215 aa21.15■□□□□ 0.98
MKS1-209ENST00000580127 ZNF536O15090 1300 aa21.14■□□□□ 0.97
MKS1-209ENST00000580127 SOWAHBA6NEL2 793 aa21.14■□□□□ 0.97
MKS1-209ENST00000580127 ADCY6O43306 1168 aa21.14■□□□□ 0.97
MKS1-209ENST00000580127 CCDC96Q2M329 555 aa21.14■□□□□ 0.97
MKS1-209ENST00000580127 NSMFQ6X4W1 530 aa21.14■□□□□ 0.97
MKS1-209ENST00000580127 TICAM2Q86XR7 235 aa21.14■□□□□ 0.97
MKS1-209ENST00000580127 DCAF4Q8WV16 495 aa21.14■□□□□ 0.97
MKS1-209ENST00000580127 EVI5LQ96CN4 794 aa21.14■□□□□ 0.97
MKS1-209ENST00000580127 HIPK3Q9H422 1215 aa21.14■□□□□ 0.97
MKS1-209ENST00000580127 VTA1Q9NP79 307 aa21.14■□□□□ 0.97
MKS1-209ENST00000580127 TOMM22Q9NS69 142 aa21.14■□□□□ 0.97
MKS1-209ENST00000580127 CYP39A1Q9NYL5 469 aa21.14■□□□□ 0.97
MKS1-209ENST00000580127 GNEQ9Y223 722 aaKnown RBP21.14■□□□□ 0.97
MKS1-209ENST00000580127 LOC102724159A0A0B4J2E5 919 aa21.13■□□□□ 0.97
MKS1-209ENST00000580127 CD4P01730 458 aa21.13■□□□□ 0.97
MKS1-209ENST00000580127 IRX5P78411 483 aaPredicted RBP21.13■□□□□ 0.97
MKS1-209ENST00000580127 CTDSPL2Q05D32 466 aa21.13■□□□□ 0.97
MKS1-209ENST00000580127 PWP2Q15269 919 aaKnown RBP21.13■□□□□ 0.97
MKS1-209ENST00000580127 BRDTQ58F21 947 aaPredicted RBP21.13■□□□□ 0.97
MKS1-209ENST00000580127 KIAA1211Q6ZU35 1233 aa21.13■□□□□ 0.97
MKS1-209ENST00000580127 C16orf59Q7L2K0 433 aa21.13■□□□□ 0.97
MKS1-209ENST00000580127 SLC43A3Q8NBI5 491 aa21.13■□□□□ 0.97
MKS1-209ENST00000580127 HELLSQ9NRZ9 838 aa21.13■□□□□ 0.97
MKS1-209ENST00000580127 ANAPC4Q9UJX5 808 aa21.13■□□□□ 0.97
MKS1-209ENST00000580127 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.13■□□□□ 0.97
MKS1-209ENST00000580127 B4DLN1 442 aa21.12■□□□□ 0.97
MKS1-209ENST00000580127 CTAGE5O15320 804 aa21.12■□□□□ 0.97
MKS1-209ENST00000580127 ORC4O43929 436 aa21.12■□□□□ 0.97
MKS1-209ENST00000580127 ICAM1P05362 532 aa21.12■□□□□ 0.97
MKS1-209ENST00000580127 SUPT20HL2P0C7V6 817 aa21.12■□□□□ 0.97
MKS1-209ENST00000580127 ACRP10323 421 aa21.12■□□□□ 0.97
MKS1-209ENST00000580127 CYP2C18P33260 490 aa21.12■□□□□ 0.97
MKS1-209ENST00000580127 MRPL12P52815 198 aaKnown RBP21.12■□□□□ 0.97
MKS1-209ENST00000580127 ALX1Q15699 326 aa21.12■□□□□ 0.97
MKS1-209ENST00000580127 HERVK_113Q902F9 699 aa21.12■□□□□ 0.97
MKS1-209ENST00000580127 IL17RBQ9NRM6 502 aa21.12■□□□□ 0.97
MKS1-209ENST00000580127 MTMR7Q9Y216 660 aa21.12■□□□□ 0.97
MKS1-209ENST00000580127 UNC80Q8N2C7 3258 aa21.12■□□□□ 0.97
MKS1-209ENST00000580127 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.11■□□□□ 0.97
MKS1-209ENST00000580127 SMPD1P17405 629 aa21.11■□□□□ 0.97
MKS1-209ENST00000580127 ANKRD45Q5TZF3 282 aa21.11■□□□□ 0.97
MKS1-209ENST00000580127 RASIP1Q5U651 963 aa21.11■□□□□ 0.97
MKS1-209ENST00000580127 EEPD1Q7L9B9 569 aa21.11■□□□□ 0.97
MKS1-209ENST00000580127 SLC28A3Q9HAS3 691 aa21.11■□□□□ 0.97
MKS1-209ENST00000580127 GPHNQ9NQX3 736 aaPredicted RBP21.11■□□□□ 0.97
MKS1-209ENST00000580127 POLR3EQ9NVU0 708 aa21.11■□□□□ 0.97
MKS1-209ENST00000580127 PCDHB15Q9Y5E8 787 aa21.11■□□□□ 0.97
MKS1-209ENST00000580127 TOP1P11387 765 aaKnown RBP21.1■□□□□ 0.97
MKS1-209ENST00000580127 MUM1L1Q5H9M0 696 aa21.1■□□□□ 0.97
MKS1-209ENST00000580127 PBX4Q9BYU1 374 aa21.1■□□□□ 0.97
MKS1-209ENST00000580127 NMT2O60551 498 aa21.09■□□□□ 0.97
MKS1-209ENST00000580127 CPT1AP50416 773 aa21.09■□□□□ 0.97
MKS1-209ENST00000580127 SNAP25P60880 206 aa21.09■□□□□ 0.97
MKS1-209ENST00000580127 DUSP28Q4G0W2 176 aa21.09■□□□□ 0.97
MKS1-209ENST00000580127 TJAP1Q5JTD0 557 aa21.09■□□□□ 0.97
MKS1-209ENST00000580127 AKNAD1Q5T1N1 836 aa21.09■□□□□ 0.97
MKS1-209ENST00000580127 TAPT1Q6NXT6 567 aa21.09■□□□□ 0.97
MKS1-209ENST00000580127 BTNL9Q6UXG8 535 aa21.09■□□□□ 0.97
MKS1-209ENST00000580127 OTUD7AQ8TE49 926 aaPredicted RBP21.09■□□□□ 0.97
MKS1-209ENST00000580127 INCENPQ9NQS7 918 aa21.09■□□□□ 0.97
MKS1-209ENST00000580127 PDGFCQ9NRA1 345 aa21.09■□□□□ 0.97
MKS1-209ENST00000580127 TCP11L1Q9NUJ3 509 aa21.09■□□□□ 0.97
MKS1-209ENST00000580127 ASTN1O14525 1302 aa21.08■□□□□ 0.97
MKS1-209ENST00000580127 RAD50Q92878 1312 aa21.08■□□□□ 0.97
MKS1-209ENST00000580127 PTPDC1A2A3K4 754 aa21.08■□□□□ 0.97
MKS1-209ENST00000580127 BAATQ14032 418 aaPredicted RBP21.08■□□□□ 0.97
MKS1-209ENST00000580127 MCMDC2Q4G0Z9 681 aa21.08■□□□□ 0.97
MKS1-209ENST00000580127 RRP12Q5JTH9 1297 aaKnown RBP21.08■□□□□ 0.97
MKS1-209ENST00000580127 SYDE2Q5VT97 1194 aa21.08■□□□□ 0.97
MKS1-209ENST00000580127 FBXO16Q8IX29 292 aaPredicted RBP21.08■□□□□ 0.97
MKS1-209ENST00000580127 MORC4Q8TE76 937 aa21.08■□□□□ 0.97
MKS1-209ENST00000580127 TTC14Q96N46 770 aa21.08■□□□□ 0.97
MKS1-209ENST00000580127 WDR11Q9BZH6 1224 aa21.08■□□□□ 0.97
MKS1-209ENST00000580127 RANBP17Q9H2T7 1088 aaKnown RBP21.08■□□□□ 0.97
MKS1-209ENST00000580127 SLC4A7Q9Y6M7 1214 aa21.08■□□□□ 0.97
MKS1-209ENST00000580127 GRXCR1A8MXD5 290 aa21.07■□□□□ 0.96
MKS1-209ENST00000580127 KPNA6O60684 536 aa21.07■□□□□ 0.96
MKS1-209ENST00000580127 FGRP09769 529 aa21.07■□□□□ 0.96
MKS1-209ENST00000580127 PCP11498 1178 aaKnown RBP21.07■□□□□ 0.96
MKS1-209ENST00000580127 NOVP48745 357 aa21.07■□□□□ 0.96
MKS1-209ENST00000580127 TRPV6Q9H1D0 765 aa21.07■□□□□ 0.96
MKS1-209ENST00000580127 TSPYL2Q9H2G4 693 aaPredicted RBP21.07■□□□□ 0.96
MKS1-209ENST00000580127 NKRFO15226 690 aaKnown RBP eCLIP21.06■□□□□ 0.96
MKS1-209ENST00000580127 FGAP02671 866 aa21.06■□□□□ 0.96
MKS1-209ENST00000580127 PFKMP08237 780 aa21.06■□□□□ 0.96
MKS1-209ENST00000580127 SLC16A2P36021 539 aa21.06■□□□□ 0.96
MKS1-209ENST00000580127 PBX2P40425 430 aa21.06■□□□□ 0.96
MKS1-209ENST00000580127 ALDH5A1P51649 535 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms