RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	GMCL1P1	Q8NEA9	526 aa		11.44	□□□□□ -0.58
MSI2-208	ENST00000579466	PURB	Q96QR8	312 aa	Known RBP	11.44	□□□□□ -0.58
MSI2-208	ENST00000579466	NAPB	Q9H115	298 aa		11.44	□□□□□ -0.58
MSI2-208	ENST00000579466	HIPK3	Q9H422	1215 aa		11.44	□□□□□ -0.58
MSI2-208	ENST00000579466	IL23A	Q9NPF7	189 aa		11.44	□□□□□ -0.58
MSI2-208	ENST00000579466	PDGFC	Q9NRA1	345 aa		11.44	□□□□□ -0.58
MSI2-208	ENST00000579466	THEG	Q9P2T0	379 aa		11.44	□□□□□ -0.58
MSI2-208	ENST00000579466	MSRA	Q9UJ68	235 aa		11.44	□□□□□ -0.58
MSI2-208	ENST00000579466	RCAN3	Q9UKA8	241 aa		11.44	□□□□□ -0.58
MSI2-208	ENST00000579466	STX8	Q9UNK0	236 aa		11.44	□□□□□ -0.58
MSI2-208	ENST00000579466	PLIN4	Q96Q06	1357 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	ZNF536	O15090	1300 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	ZBBX	A8MT70	800 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	TNFRSF10A	O00220	468 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	NMT2	O60551	498 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	ZFY	P08048	801 aa	Predicted RBP	11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	SMPD1	P17405	629 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	GNAT2	P19087	354 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	RABGGTB	P53611	331 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	CTDSPL2	Q05D32	466 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	PDE4B	Q07343	736 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	PPARA	Q07869	468 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	ADGRE1	Q14246	886 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	FSCN1	Q16658	493 aa	Known RBP	11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	MUM1L1	Q5H9M0	696 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	RASIP1	Q5U651	963 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	PPP1R13L	Q8WUF5	828 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	MKL1	Q969V6	931 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	TRERF1	Q96PN7	1200 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	FSD1	Q9BTV5	496 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	NACAP1	Q9BZK3	213 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	AP5M1	Q9H0R1	490 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	TRPV6	Q9H1D0	765 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	RAPGEFL1	Q9UHV5	662 aa		11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	YBX2	Q9Y2T7	364 aa	Known RBP	11.43	□□□□□ -0.58
MSI2-208	ENST00000579466	CHD9	Q3L8U1	2897 aa		11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	ASB14	A6NK59	587 aa		11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	TSPY2	A6NKD2	308 aa		11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	PATL2	C9JE40	543 aa	Known RBP	11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	B4GALT4	O60513	344 aa		11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	CD4	P01730	458 aa		11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	FGB	P02675	491 aa		11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	SLC3A2	P08195	630 aa	Known RBP	11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	MYOG	P15173	224 aa		11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	ITGA7	Q13683	1181 aa		11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	RAB30	Q15771	203 aa		11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	CCDC96	Q2M329	555 aa		11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	DIEXF	Q68CQ4	756 aa	Known RBP	11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	NEDD1	Q8NHV4	660 aa		11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	CHURC1	Q8WUH1	139 aa		11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	SCLY	Q96I15	445 aa		11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	WNT8A	Q9H1J5	351 aa		11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	MTIF3	Q9H2K0	278 aa	Known RBP	11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	SLC28A3	Q9HAS3	691 aa		11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	INCENP	Q9NQS7	918 aa		11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	NCOR1	O75376	2440 aa		11.42	□□□□□ -0.58
MSI2-208	ENST00000579466	GRIN2D	O15399	1336 aa		11.41	□□□□□ -0.58
MSI2-208	ENST00000579466	COL9A1	P20849	921 aa		11.41	□□□□□ -0.58
MSI2-208	ENST00000579466	PPP2R2D	Q66LE6	453 aa		11.41	□□□□□ -0.58
MSI2-208	ENST00000579466	KIAA1211	Q6ZU35	1233 aa		11.41	□□□□□ -0.58
MSI2-208	ENST00000579466	FAM160B2	Q86V87	743 aa		11.41	□□□□□ -0.58
MSI2-208	ENST00000579466	IL27	Q8NEV9	243 aa		11.41	□□□□□ -0.58
MSI2-208	ENST00000579466	ADAMTS19	Q8TE59	1207 aa		11.41	□□□□□ -0.58
MSI2-208	ENST00000579466	STAG1	Q8WVM7	1258 aa		11.41	□□□□□ -0.58
MSI2-208	ENST00000579466	HERVK_113	Q902F9	699 aa		11.41	□□□□□ -0.58
MSI2-208	ENST00000579466	NOC4L	Q9BVI4	516 aa	Known RBP	11.41	□□□□□ -0.58
MSI2-208	ENST00000579466	TOMM22	Q9NS69	142 aa		11.41	□□□□□ -0.58
MSI2-208	ENST00000579466	CCPG1	Q9ULG6	757 aa		11.41	□□□□□ -0.58
MSI2-208	ENST00000579466	PRR12	Q9ULL5	1215 aa		11.41	□□□□□ -0.58
MSI2-208	ENST00000579466	GNE	Q9Y223	722 aa	Known RBP	11.41	□□□□□ -0.58
MSI2-208	ENST00000579466	MUC3A	Q02505	3323 aa		11.4	□□□□□ -0.58
MSI2-208	ENST00000579466	ZEB2	O60315	1214 aa		11.4	□□□□□ -0.58
MSI2-208	ENST00000579466	RANBP6	O60518	1105 aa	Known RBP	11.4	□□□□□ -0.58
MSI2-208	ENST00000579466	CABYR	O75952	493 aa		11.4	□□□□□ -0.58
MSI2-208	ENST00000579466	CYP2C9	P11712	490 aa		11.4	□□□□□ -0.58
MSI2-208	ENST00000579466	SLC16A2	P36021	539 aa		11.4	□□□□□ -0.58
MSI2-208	ENST00000579466	CHMP4BP1	P59074	171 aa		11.4	□□□□□ -0.58
MSI2-208	ENST00000579466	SKIV2L	Q15477	1246 aa	Known RBP	11.4	□□□□□ -0.58
MSI2-208	ENST00000579466	FAM47C	Q5HY64	1035 aa		11.4	□□□□□ -0.58
MSI2-208	ENST00000579466	DEFB128	Q7Z7B8	93 aa		11.4	□□□□□ -0.58
MSI2-208	ENST00000579466	GMCL1	Q96IK5	515 aa		11.4	□□□□□ -0.58
MSI2-208	ENST00000579466	NECAB3	Q96P71	396 aa	Predicted RBP	11.4	□□□□□ -0.58
MSI2-208	ENST00000579466	ASB2	Q96Q27	587 aa		11.4	□□□□□ -0.58
MSI2-208	ENST00000579466	CERS4	Q9HA82	394 aa		11.4	□□□□□ -0.58
MSI2-208	ENST00000579466	TRMT13	Q9NUP7	481 aa	Known RBP	11.4	□□□□□ -0.58
MSI2-208	ENST00000579466	CYP39A1	Q9NYL5	469 aa		11.4	□□□□□ -0.58
MSI2-208	ENST00000579466	SYNPO2	Q9UMS6	1093 aa		11.4	□□□□□ -0.58
MSI2-208	ENST00000579466	SLC4A7	Q9Y6M7	1214 aa		11.4	□□□□□ -0.58
MSI2-208	ENST00000579466	TANC1	Q9C0D5	1861 aa		11.4	□□□□□ -0.59
MSI2-208	ENST00000579466	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.39	□□□□□ -0.59
MSI2-208	ENST00000579466	PTPDC1	A2A3K4	754 aa		11.39	□□□□□ -0.59
MSI2-208	ENST00000579466	BDP1	A6H8Y1	2624 aa		11.39	□□□□□ -0.59
MSI2-208	ENST00000579466	MYL3	P08590	195 aa		11.39	□□□□□ -0.59
MSI2-208	ENST00000579466	FDX1	P10109	184 aa		11.39	□□□□□ -0.59
MSI2-208	ENST00000579466	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.39	□□□□□ -0.59
MSI2-208	ENST00000579466	TKFC	Q3LXA3	575 aa		11.39	□□□□□ -0.59
MSI2-208	ENST00000579466	RRP12	Q5JTH9	1297 aa	Known RBP	11.39	□□□□□ -0.59
MSI2-208	ENST00000579466	AKNAD1	Q5T1N1	836 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms