RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 FAM133AQ8N9E0 248 aa27.88■■■□□ 2.05
LIMD2-207ENST00000579329 DPF3Q92784 378 aa27.88■■■□□ 2.05
LIMD2-207ENST00000579329 GPHNQ9NQX3 736 aaPredicted RBP27.88■■■□□ 2.05
LIMD2-207ENST00000579329 SYNGAP1Q96PV0 1343 aa27.88■■■□□ 2.05
LIMD2-207ENST00000579329 DDAH1O94760 285 aa27.87■■■□□ 2.05
LIMD2-207ENST00000579329 COL9A3Q14050 684 aaPredicted RBP27.87■■■□□ 2.05
LIMD2-207ENST00000579329 PRAMEF19Q5SWL8 479 aa27.87■■■□□ 2.05
LIMD2-207ENST00000579329 NFXL1Q6ZNB6 911 aa27.87■■■□□ 2.05
LIMD2-207ENST00000579329 ZNF654Q8IZM8 581 aa27.87■■■□□ 2.05
LIMD2-207ENST00000579329 FGD4Q96M96 766 aa27.87■■■□□ 2.05
LIMD2-207ENST00000579329 JMJD4Q9H9V9 463 aa27.87■■■□□ 2.05
LIMD2-207ENST00000579329 CYP39A1Q9NYL5 469 aa27.87■■■□□ 2.05
LIMD2-207ENST00000579329 CNPY2Q9Y2B0 182 aa27.87■■■□□ 2.05
LIMD2-207ENST00000579329 CCDC69A6NI79 296 aa27.86■■■□□ 2.05
LIMD2-207ENST00000579329 SEPT4O43236 478 aa27.86■■■□□ 2.05
LIMD2-207ENST00000579329 HSPA4P34932 840 aa27.86■■■□□ 2.05
LIMD2-207ENST00000579329 LIFRP42702 1097 aa27.86■■■□□ 2.05
LIMD2-207ENST00000579329 CNTN2Q02246 1040 aa27.86■■■□□ 2.05
LIMD2-207ENST00000579329 NUP133Q8WUM0 1156 aa27.86■■■□□ 2.05
LIMD2-207ENST00000579329 KCNB2Q92953 911 aa27.86■■■□□ 2.05
LIMD2-207ENST00000579329 VAT1LQ9HCJ6 419 aa27.86■■■□□ 2.05
LIMD2-207ENST00000579329 NFIBO00712 420 aa27.85■■■□□ 2.05
LIMD2-207ENST00000579329 EPB41L2O43491 1005 aaKnown RBP27.85■■■□□ 2.05
LIMD2-207ENST00000579329 QRICH1Q2TAL8 776 aa27.85■■■□□ 2.05
LIMD2-207ENST00000579329 USH1GQ495M9 461 aa27.85■■■□□ 2.05
LIMD2-207ENST00000579329 CLEC4DQ8WXI8 215 aa27.85■■■□□ 2.05
LIMD2-207ENST00000579329 MAP3K14Q99558 947 aa27.85■■■□□ 2.05
LIMD2-207ENST00000579329 FRMPD3Q5JV73 1810 aa27.85■■■□□ 2.05
LIMD2-207ENST00000579329 ADCK5Q3MIX3 580 aa27.84■■■□□ 2.05
LIMD2-207ENST00000579329 CTCFLQ8NI51 663 aaPredicted RBP27.84■■■□□ 2.05
LIMD2-207ENST00000579329 LRRC2Q9BYS8 371 aa27.84■■■□□ 2.05
LIMD2-207ENST00000579329 RBM27Q9P2N5 1060 aaKnown RBP27.84■■■□□ 2.05
LIMD2-207ENST00000579329 ABCB11O95342 1321 aa27.84■■■□□ 2.05
LIMD2-207ENST00000579329 SMCHD1A6NHR9 2005 aa27.84■■■□□ 2.05
LIMD2-207ENST00000579329 HMGB1P09429 215 aaKnown RBP27.83■■■□□ 2.05
LIMD2-207ENST00000579329 DHX32Q7L7V1 743 aaKnown RBP27.83■■■□□ 2.05
LIMD2-207ENST00000579329 FBXO11Q86XK2 927 aa27.83■■■□□ 2.05
LIMD2-207ENST00000579329 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.83■■■□□ 2.05
LIMD2-207ENST00000579329 PTPDC1A2A3K4 754 aa27.82■■■□□ 2.04
LIMD2-207ENST00000579329 SOWAHBA6NEL2 793 aa27.82■■■□□ 2.04
LIMD2-207ENST00000579329 ASB14A6NK59 587 aa27.82■■■□□ 2.04
LIMD2-207ENST00000579329 SNAI1O95863 264 aaPredicted RBP27.82■■■□□ 2.04
LIMD2-207ENST00000579329 ZNF865P0CJ78 1059 aaPredicted RBP27.82■■■□□ 2.04
LIMD2-207ENST00000579329 KIF5BP33176 963 aa27.82■■■□□ 2.04
LIMD2-207ENST00000579329 BAATQ14032 418 aaPredicted RBP27.82■■■□□ 2.04
LIMD2-207ENST00000579329 ARMCX2Q7L311 632 aa27.82■■■□□ 2.04
LIMD2-207ENST00000579329 NECAB2Q7Z6G3 386 aa27.82■■■□□ 2.04
LIMD2-207ENST00000579329 DIS3LQ8TF46 1054 aaKnown RBP27.82■■■□□ 2.04
LIMD2-207ENST00000579329 MTMR8Q96EF0 704 aa27.82■■■□□ 2.04
LIMD2-207ENST00000579329 PAWRQ96IZ0 340 aaKnown RBP27.82■■■□□ 2.04
LIMD2-207ENST00000579329 MYL10Q9BUA6 226 aa27.82■■■□□ 2.04
LIMD2-207ENST00000579329 HTATIP2Q9BUP3 242 aa27.82■■■□□ 2.04
LIMD2-207ENST00000579329 CALM1P0DP23 149 aa27.81■■■□□ 2.04
LIMD2-207ENST00000579329 CALM2P0DP24 149 aa27.81■■■□□ 2.04
LIMD2-207ENST00000579329 CALM3P0DP25 149 aa27.81■■■□□ 2.04
LIMD2-207ENST00000579329 EXOSC10Q01780 885 aaKnown RBP27.81■■■□□ 2.04
LIMD2-207ENST00000579329 RNF207Q6ZRF8 634 aa27.81■■■□□ 2.04
LIMD2-207ENST00000579329 SGMS1Q86VZ5 419 aa27.81■■■□□ 2.04
LIMD2-207ENST00000579329 AMNQ9BXJ7 453 aa27.81■■■□□ 2.04
LIMD2-207ENST00000579329 MAF1Q9H063 256 aa27.81■■■□□ 2.04
LIMD2-207ENST00000579329 RIOX1Q9H6W3 641 aa27.81■■■□□ 2.04
LIMD2-207ENST00000579329 SNX14Q9Y5W7 946 aa27.81■■■□□ 2.04
LIMD2-207ENST00000579329 SLC12A7Q9Y666 1083 aa27.81■■■□□ 2.04
LIMD2-207ENST00000579329 ZBTB5O15062 677 aa27.8■■■□□ 2.04
LIMD2-207ENST00000579329 AKR1A1P14550 325 aa27.8■■■□□ 2.04
LIMD2-207ENST00000579329 MNX1P50219 401 aaPredicted RBP27.8■■■□□ 2.04
LIMD2-207ENST00000579329 SLC30A10Q6XR72 485 aa27.8■■■□□ 2.04
LIMD2-207ENST00000579329 CCDC144CPQ8IYA2 1237 aa27.8■■■□□ 2.04
LIMD2-207ENST00000579329 RGS22Q8NE09 1264 aa27.8■■■□□ 2.04
LIMD2-207ENST00000579329 ABHD16BQ9H3Z7 469 aa27.8■■■□□ 2.04
LIMD2-207ENST00000579329 ADD3Q9UEY8 706 aaKnown RBP27.8■■■□□ 2.04
LIMD2-207ENST00000579329 ZHX1Q9UKY1 873 aaPredicted RBP27.8■■■□□ 2.04
LIMD2-207ENST00000579329 MRPL11Q9Y3B7 192 aaKnown RBP27.8■■■□□ 2.04
LIMD2-207ENST00000579329 MYH6P13533 1939 aa27.79■■■□□ 2.04
LIMD2-207ENST00000579329 SLC35G1Q2M3R5 365 aa27.79■■■□□ 2.04
LIMD2-207ENST00000579329 ANO1Q5XXA6 986 aa27.79■■■□□ 2.04
LIMD2-207ENST00000579329 HOMER1Q86YM7 354 aa27.79■■■□□ 2.04
LIMD2-207ENST00000579329 TCEANC2Q96MN5 208 aa27.79■■■□□ 2.04
LIMD2-207ENST00000579329 LCTP09848 1927 aa27.79■■■□□ 2.04
LIMD2-207ENST00000579329 ASTN1O14525 1302 aa27.78■■■□□ 2.04
LIMD2-207ENST00000579329 CYTH3O43739 400 aa27.78■■■□□ 2.04
LIMD2-207ENST00000579329 RARBP10826 455 aa27.78■■■□□ 2.04
LIMD2-207ENST00000579329 CALML3P27482 149 aa27.78■■■□□ 2.04
LIMD2-207ENST00000579329 GNAQP50148 359 aa27.78■■■□□ 2.04
LIMD2-207ENST00000579329 RPS6P62753 249 aaKnown RBP27.78■■■□□ 2.04
LIMD2-207ENST00000579329 TRAF1Q13077 416 aa27.78■■■□□ 2.04
LIMD2-207ENST00000579329 ACVR2BQ13705 512 aa27.78■■■□□ 2.04
LIMD2-207ENST00000579329 SYNE3Q6ZMZ3 975 aa27.78■■■□□ 2.04
LIMD2-207ENST00000579329 JAKMIP1Q96N16 626 aaKnown RBP27.78■■■□□ 2.04
LIMD2-207ENST00000579329 PIGSQ96S52 555 aa27.78■■■□□ 2.04
LIMD2-207ENST00000579329 LZTS2Q9BRK4 669 aa27.78■■■□□ 2.04
LIMD2-207ENST00000579329 C11orf49Q9H6J7 331 aa27.78■■■□□ 2.04
LIMD2-207ENST00000579329 FAM184BQ9ULE4 1060 aa27.78■■■□□ 2.04
LIMD2-207ENST00000579329 LOC102724159A0A0B4J2E5 919 aa27.77■■■□□ 2.04
LIMD2-207ENST00000579329 PWP2Q15269 919 aaKnown RBP27.77■■■□□ 2.04
LIMD2-207ENST00000579329 MCF2L2Q86YR7 1114 aa27.77■■■□□ 2.04
LIMD2-207ENST00000579329 ARRDC4Q8NCT1 418 aa27.77■■■□□ 2.04
LIMD2-207ENST00000579329 SPZ1Q9BXG8 430 aa27.77■■■□□ 2.04
LIMD2-207ENST00000579329 RXRAP19793 462 aa27.76■■■□□ 2.03
LIMD2-207ENST00000579329 SMARCA1P28370 1054 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms