RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 GJA9P57773 515 aa13.56□□□□□ -0.24
SSH2-208ENST00000579040 SNAP25P60880 206 aa13.56□□□□□ -0.24
SSH2-208ENST00000579040 NKX3-2P78367 333 aa13.56□□□□□ -0.24
SSH2-208ENST00000579040 TLE2Q04725 743 aa13.56□□□□□ -0.24
SSH2-208ENST00000579040 PWP2Q15269 919 aaKnown RBP13.56□□□□□ -0.24
SSH2-208ENST00000579040 IMMTQ16891 758 aaKnown RBP13.56□□□□□ -0.24
SSH2-208ENST00000579040 GPATCH4Q5T3I0 446 aaKnown RBP13.56□□□□□ -0.24
SSH2-208ENST00000579040 CCSAPQ6IQ19 270 aaPredicted RBP13.56□□□□□ -0.24
SSH2-208ENST00000579040 IQCA1Q86XH1 822 aa13.56□□□□□ -0.24
SSH2-208ENST00000579040 TOX2Q96NM4 488 aa13.56□□□□□ -0.24
SSH2-208ENST00000579040 GPCPD1Q9NPB8 672 aa13.56□□□□□ -0.24
SSH2-208ENST00000579040 PRDM5Q9NQX1 630 aaPredicted RBP13.56□□□□□ -0.24
SSH2-208ENST00000579040 FRMPD2Q68DX3 1309 aaPredicted RBP13.56□□□□□ -0.24
SSH2-208ENST00000579040 WDR19Q8NEZ3 1342 aa13.56□□□□□ -0.24
SSH2-208ENST00000579040 RAD50Q92878 1312 aa13.56□□□□□ -0.24
SSH2-208ENST00000579040 ADCY6O43306 1168 aa13.55□□□□□ -0.24
SSH2-208ENST00000579040 CLTBP09497 229 aa13.55□□□□□ -0.24
SSH2-208ENST00000579040 C6orf222P0C671 652 aaPredicted RBP13.55□□□□□ -0.24
SSH2-208ENST00000579040 KCNA10Q16322 511 aa13.55□□□□□ -0.24
SSH2-208ENST00000579040 TTC22Q5TAA0 569 aa13.55□□□□□ -0.24
SSH2-208ENST00000579040 NSMFQ6X4W1 530 aa13.55□□□□□ -0.24
SSH2-208ENST00000579040 ANKRD33Q7Z3H0 272 aa13.55□□□□□ -0.24
SSH2-208ENST00000579040 STARD7Q9NQZ5 370 aa13.55□□□□□ -0.24
SSH2-208ENST00000579040 ADD3Q9UEY8 706 aaKnown RBP13.55□□□□□ -0.24
SSH2-208ENST00000579040 ELP1O95163 1332 aa13.55□□□□□ -0.24
SSH2-208ENST00000579040 TRIM43BA6NCK2 446 aa13.54□□□□□ -0.24
SSH2-208ENST00000579040 KIAA0355O15063 1070 aa13.54□□□□□ -0.24
SSH2-208ENST00000579040 KDM4AO75164 1064 aa13.54□□□□□ -0.24
SSH2-208ENST00000579040 PDE4AP27815 886 aa13.54□□□□□ -0.24
SSH2-208ENST00000579040 TNFAIP2Q03169 654 aa13.54□□□□□ -0.24
SSH2-208ENST00000579040 MORC4Q8TE76 937 aa13.54□□□□□ -0.24
SSH2-208ENST00000579040 ANKS1AQ92625 1134 aa13.54□□□□□ -0.24
SSH2-208ENST00000579040 TRIM43Q96BQ3 446 aaPredicted RBP13.54□□□□□ -0.24
SSH2-208ENST00000579040 GLT1D1Q96MS3 346 aa13.54□□□□□ -0.24
SSH2-208ENST00000579040 KRT23Q9C075 422 aa13.54□□□□□ -0.24
SSH2-208ENST00000579040 CNNM2Q9H8M5 875 aa13.54□□□□□ -0.24
SSH2-208ENST00000579040 VTA1Q9NP79 307 aa13.54□□□□□ -0.24
SSH2-208ENST00000579040 ASTN1O14525 1302 aa13.54□□□□□ -0.24
SSH2-208ENST00000579040 MROH7Q68CQ1 1323 aa13.54□□□□□ -0.24
SSH2-208ENST00000579040 MYADML2A6NDP7 307 aa13.53□□□□□ -0.24
SSH2-208ENST00000579040 DCDC2CA8MYV0 355 aa13.53□□□□□ -0.24
SSH2-208ENST00000579040 B4E1Z4 1266 aa13.53□□□□□ -0.24
SSH2-208ENST00000579040 PQBP1O60828 265 aaKnown RBP13.53□□□□□ -0.24
SSH2-208ENST00000579040 GSPT1P15170 499 aaKnown RBP13.53□□□□□ -0.24
SSH2-208ENST00000579040 GNASQ5JWF2 1037 aa13.53□□□□□ -0.24
SSH2-208ENST00000579040 IQSEC1Q6DN90 963 aa13.53□□□□□ -0.24
SSH2-208ENST00000579040 SH3RF1Q7Z6J0 888 aa13.53□□□□□ -0.24
SSH2-208ENST00000579040 PNMA1Q8ND90 353 aa13.53□□□□□ -0.24
SSH2-208ENST00000579040 RUFY2Q8WXA3 655 aa13.53□□□□□ -0.24
SSH2-208ENST00000579040 BADQ92934 168 aa13.53□□□□□ -0.24
SSH2-208ENST00000579040 ZSCAN10Q96SZ4 725 aaPredicted RBP13.53□□□□□ -0.24
SSH2-208ENST00000579040 ZKSCAN3Q9BRR0 538 aa13.53□□□□□ -0.24
SSH2-208ENST00000579040 MAF1Q9H063 256 aa13.53□□□□□ -0.24
SSH2-208ENST00000579040 KAT14Q9H8E8 782 aa13.53□□□□□ -0.24
SSH2-208ENST00000579040 GNEQ9Y223 722 aaKnown RBP13.53□□□□□ -0.24
SSH2-208ENST00000579040 Q9Y3F1 56 aa13.53□□□□□ -0.24
SSH2-208ENST00000579040 A0A0U1RQG5 324 aaPredicted RBP13.52□□□□□ -0.25
SSH2-208ENST00000579040 NFIBO00712 420 aa13.52□□□□□ -0.25
SSH2-208ENST00000579040 CTAGE5O15320 804 aa13.52□□□□□ -0.25
SSH2-208ENST00000579040 ASGR1P07306 291 aa13.52□□□□□ -0.25
SSH2-208ENST00000579040 BAATQ14032 418 aaPredicted RBP13.52□□□□□ -0.25
SSH2-208ENST00000579040 ASPRV1Q53RT3 343 aa13.52□□□□□ -0.25
SSH2-208ENST00000579040 NOL8Q76FK4 1167 aaKnown RBP13.52□□□□□ -0.25
SSH2-208ENST00000579040 TLK2Q86UE8 772 aa13.52□□□□□ -0.25
SSH2-208ENST00000579040 DEFB123Q8N688 67 aa13.52□□□□□ -0.25
SSH2-208ENST00000579040 ENAHQ8N8S7 591 aaPredicted RBP13.52□□□□□ -0.25
SSH2-208ENST00000579040 AP5M1Q9H0R1 490 aa13.52□□□□□ -0.25
SSH2-208ENST00000579040 ZSWIM5Q9P217 1185 aa13.52□□□□□ -0.25
SSH2-208ENST00000579040 TNKSO95271 1327 aa13.51□□□□□ -0.25
SSH2-208ENST00000579040 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.51□□□□□ -0.25
SSH2-208ENST00000579040 PTPDC1A2A3K4 754 aa13.51□□□□□ -0.25
SSH2-208ENST00000579040 CABYRO75952 493 aa13.51□□□□□ -0.25
SSH2-208ENST00000579040 RAG1P15918 1043 aa13.51□□□□□ -0.25
SSH2-208ENST00000579040 CDK7P50613 346 aa13.51□□□□□ -0.25
SSH2-208ENST00000579040 ALDH5A1P51649 535 aaPredicted RBP13.51□□□□□ -0.25
SSH2-208ENST00000579040 FAAP100Q0VG06 881 aa13.51□□□□□ -0.25
SSH2-208ENST00000579040 FAM109BQ6ICB4 259 aaPredicted RBP13.51□□□□□ -0.25
SSH2-208ENST00000579040 TAPT1Q6NXT6 567 aa13.51□□□□□ -0.25
SSH2-208ENST00000579040 FBXO16Q8IX29 292 aaPredicted RBP13.51□□□□□ -0.25
SSH2-208ENST00000579040 CLEC4DQ8WXI8 215 aa13.51□□□□□ -0.25
SSH2-208ENST00000579040 MPHOSPH6Q99547 160 aaKnown RBP13.51□□□□□ -0.25
SSH2-208ENST00000579040 UBAC1Q9BSL1 405 aa13.51□□□□□ -0.25
SSH2-208ENST00000579040 SEZ6LQ9BYH1 1024 aa13.51□□□□□ -0.25
SSH2-208ENST00000579040 TMEM39AQ9NV64 488 aa13.51□□□□□ -0.25
SSH2-208ENST00000579040 KIAA1217Q5T5P2 1943 aa13.51□□□□□ -0.25
SSH2-208ENST00000579040 SZT2Q5T011 3432 aa13.5□□□□□ -0.25
SSH2-208ENST00000579040 B4DLN1 442 aa13.5□□□□□ -0.25
SSH2-208ENST00000579040 ARVCFO00192 962 aa13.5□□□□□ -0.25
SSH2-208ENST00000579040 ZEB2O60315 1214 aa13.5□□□□□ -0.25
SSH2-208ENST00000579040 GOLGA8HP0CJ92 632 aa13.5□□□□□ -0.25
SSH2-208ENST00000579040 SMPD1P17405 629 aa13.5□□□□□ -0.25
SSH2-208ENST00000579040 MRPL12P52815 198 aaKnown RBP13.5□□□□□ -0.25
SSH2-208ENST00000579040 IRX5P78411 483 aaPredicted RBP13.5□□□□□ -0.25
SSH2-208ENST00000579040 SHHQ15465 462 aa13.5□□□□□ -0.25
SSH2-208ENST00000579040 FSCN1Q16658 493 aaKnown RBP13.5□□□□□ -0.25
SSH2-208ENST00000579040 SLC30A10Q6XR72 485 aa13.5□□□□□ -0.25
SSH2-208ENST00000579040 RNF207Q6ZRF8 634 aa13.5□□□□□ -0.25
SSH2-208ENST00000579040 RGS22Q8NE09 1264 aa13.5□□□□□ -0.25
SSH2-208ENST00000579040 DNERQ8NFT8 737 aa13.5□□□□□ -0.25
SSH2-208ENST00000579040 VTI1AQ96AJ9 217 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms