RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 STAG2Q8N3U4 1231 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 TRPV1Q8NER1 839 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 IGDCC4Q8TDY8 1250 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 VTI1AQ96AJ9 217 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 TMEM87BQ96K49 555 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 AMNQ9BXJ7 453 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 ABHD16BQ9H3Z7 469 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 JMJD4Q9H9V9 463 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 SPC25Q9HBM1 224 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 XPNPEP3Q9NQH7 507 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.62□□□□□ -1.19
TRAF4-213ENST00000578917 CYP39A1Q9NYL5 469 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 OGDHLQ9ULD0 1010 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 MRPL11Q9Y3B7 192 aaKnown RBP7.62□□□□□ -1.19
TRAF4-213ENST00000578917 PCDHA1Q9Y5I3 950 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 PDE4DIPQ5VU43 2346 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 PTPRFP10586 1907 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 ABCB11O95342 1321 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 SYNGAP1Q96PV0 1343 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 DNAJC25-GNG10A0A024R161 153 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 NFIBO00712 420 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 ZBTB5O15062 677 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 PGK1P00558 417 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 AKR1A1P14550 325 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 GNAQP50148 359 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 PDE4DQ08499 809 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 GRM4Q14833 912 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 QRICH1Q2TAL8 776 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 CCDC144BQ3MJ40 725 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 GJC2Q5T442 439 aaPredicted RBP7.61□□□□□ -1.19
TRAF4-213ENST00000578917 PRPF38BQ5VTL8 546 aaKnown RBP7.61□□□□□ -1.19
TRAF4-213ENST00000578917 MAMDC4Q6UXC1 1216 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 ARMCX2Q7L311 632 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 DHX32Q7L7V1 743 aaKnown RBP7.61□□□□□ -1.19
TRAF4-213ENST00000578917 EEPD1Q7L9B9 569 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 ZNF654Q8IZM8 581 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 CCDC82Q8N4S0 544 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 DIS3LQ8TF46 1054 aaKnown RBP7.61□□□□□ -1.19
TRAF4-213ENST00000578917 FERMT2Q96AC1 680 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 RRP36Q96EU6 259 aaKnown RBP7.61□□□□□ -1.19
TRAF4-213ENST00000578917 LZTS2Q9BRK4 669 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 MTA3Q9BTC8 594 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 MYL10Q9BUA6 226 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 LRRC2Q9BYS8 371 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 AP5M1Q9H0R1 490 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 SENP2Q9HC62 589 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 GPHNQ9NQX3 736 aaPredicted RBP7.61□□□□□ -1.19
TRAF4-213ENST00000578917 SEC63Q9UGP8 760 aaKnown RBP7.61□□□□□ -1.19
TRAF4-213ENST00000578917 MAD2L2Q9UI95 211 aa7.61□□□□□ -1.19
TRAF4-213ENST00000578917 TNRC18O15417 2968 aaPredicted RBP7.61□□□□□ -1.19
TRAF4-213ENST00000578917 WDR19Q8NEZ3 1342 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 ZSWIM8A7E2V4 1837 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 PNMA6FA0A0J9YX94 578 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 PALM3A6NDB9 673 aaPredicted RBP7.6□□□□□ -1.19
TRAF4-213ENST00000578917 SOWAHBA6NEL2 793 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 H0YGN5 161 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 DNM1LO00429 736 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 SH2B2O14492 632 aaPredicted RBP7.6□□□□□ -1.19
TRAF4-213ENST00000578917 EIF5BO60841 1220 aaKnown RBP7.6□□□□□ -1.19
TRAF4-213ENST00000578917 DDAH1O94760 285 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 SNAI1O95863 264 aaPredicted RBP7.6□□□□□ -1.19
TRAF4-213ENST00000578917 CFBP00751 764 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 PSMA5P28066 241 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 ADCYAP1R1P41586 468 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 LIFRP42702 1097 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 ATN1P54259 1190 aaPredicted RBP7.6□□□□□ -1.19
TRAF4-213ENST00000578917 ANTXR2P58335 489 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 RPS6P62753 249 aaKnown RBP7.6□□□□□ -1.19
TRAF4-213ENST00000578917 TNFAIP2Q03169 654 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 TROAPQ12815 778 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 ARHGEF16Q5VV41 709 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 BLOC1S2Q6QNY1 142 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 RAB11FIP4Q86YS3 637 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 RASEFQ8IZ41 740 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 FAM133AQ8N9E0 248 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 FANCBQ8NB91 859 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 RGS22Q8NE09 1264 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 CLEC4DQ8WXI8 215 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 JAKMIP1Q96N16 626 aaKnown RBP7.6□□□□□ -1.19
TRAF4-213ENST00000578917 PURBQ96QR8 312 aaKnown RBP7.6□□□□□ -1.19
TRAF4-213ENST00000578917 PIGSQ96S52 555 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 LY9Q9HBG7 655 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 PRKAG2Q9UGJ0 569 aa7.6□□□□□ -1.19
TRAF4-213ENST00000578917 DYNC1LI2O43237 492 aaPredicted RBP7.59□□□□□ -1.19
TRAF4-213ENST00000578917 ZEB2O60315 1214 aa7.59□□□□□ -1.19
TRAF4-213ENST00000578917 C6orf222P0C671 652 aaPredicted RBP7.59□□□□□ -1.19
TRAF4-213ENST00000578917 ZNF865P0CJ78 1059 aaPredicted RBP7.59□□□□□ -1.19
TRAF4-213ENST00000578917 RXRAP19793 462 aa7.59□□□□□ -1.19
TRAF4-213ENST00000578917 LRRC41Q15345 812 aa7.59□□□□□ -1.19
TRAF4-213ENST00000578917 TSGA10IPQ3SY00 556 aa7.59□□□□□ -1.19
TRAF4-213ENST00000578917 GNASQ5JWF2 1037 aa7.59□□□□□ -1.19
TRAF4-213ENST00000578917 IQSEC1Q6DN90 963 aa7.59□□□□□ -1.19
TRAF4-213ENST00000578917 SLC30A10Q6XR72 485 aa7.59□□□□□ -1.19
TRAF4-213ENST00000578917 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.59□□□□□ -1.19
TRAF4-213ENST00000578917 UBE2Q1Q7Z7E8 422 aa7.59□□□□□ -1.19
TRAF4-213ENST00000578917 MICU3Q86XE3 530 aa7.59□□□□□ -1.19
TRAF4-213ENST00000578917 C7orf61Q8IZ16 206 aa7.59□□□□□ -1.19
TRAF4-213ENST00000578917 NSUN6Q8TEA1 469 aaKnown RBP7.59□□□□□ -1.19
TRAF4-213ENST00000578917 TCEANC2Q96MN5 208 aa7.59□□□□□ -1.19
TRAF4-213ENST00000578917 RMDN3Q96TC7 470 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms