RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 PCNTO95613 3336 aa14□□□□□ -0.17
IFT20-207ENST00000578547 NAPAP54920 295 aa14□□□□□ -0.17
IFT20-207ENST00000578547 FAM110CQ1W6H9 321 aa14□□□□□ -0.17
IFT20-207ENST00000578547 NCAPG2Q86XI2 1143 aa14□□□□□ -0.17
IFT20-207ENST00000578547 INTS4Q96HW7 963 aaKnown RBP14□□□□□ -0.17
IFT20-207ENST00000578547 MOV10L1Q9BXT6 1211 aaKnown RBP14□□□□□ -0.17
IFT20-207ENST00000578547 CWC22Q9HCG8 908 aaKnown RBP14□□□□□ -0.17
IFT20-207ENST00000578547 VPS54Q9P1Q0 977 aa14□□□□□ -0.17
IFT20-207ENST00000578547 ABCB11O95342 1321 aa13.99□□□□□ -0.17
IFT20-207ENST00000578547 STXBP3O00186 592 aa13.99□□□□□ -0.17
IFT20-207ENST00000578547 ATP2A1O14983 1001 aa13.99□□□□□ -0.17
IFT20-207ENST00000578547 HSPA8P11142 646 aaKnown RBP13.99□□□□□ -0.17
IFT20-207ENST00000578547 CCNA1P78396 465 aa13.99□□□□□ -0.17
IFT20-207ENST00000578547 SP3Q02447 781 aa13.99□□□□□ -0.17
IFT20-207ENST00000578547 NOM1Q5C9Z4 860 aaKnown RBP13.99□□□□□ -0.17
IFT20-207ENST00000578547 CCAR1Q8IX12 1150 aaKnown RBP13.99□□□□□ -0.17
IFT20-207ENST00000578547 ZNF296Q8WUU4 475 aaPredicted RBP13.99□□□□□ -0.17
IFT20-207ENST00000578547 TRERF1Q96PN7 1200 aa13.99□□□□□ -0.17
IFT20-207ENST00000578547 RNF146Q9NTX7 359 aa13.99□□□□□ -0.17
IFT20-207ENST00000578547 BARHL2Q9NY43 387 aa13.99□□□□□ -0.17
IFT20-207ENST00000578547 KIF3AQ9Y496 699 aa13.99□□□□□ -0.17
IFT20-207ENST00000578547 RIPK3Q9Y572 518 aa13.99□□□□□ -0.17
IFT20-207ENST00000578547 hCG_1984214I3L0E3 225 aa13.98□□□□□ -0.17
IFT20-207ENST00000578547 FKTNO75072 461 aa13.98□□□□□ -0.17
IFT20-207ENST00000578547 ERCC3P19447 782 aa13.98□□□□□ -0.17
IFT20-207ENST00000578547 CTGFP29279 349 aa13.98□□□□□ -0.17
IFT20-207ENST00000578547 CTCFP49711 727 aaPredicted RBP13.98□□□□□ -0.17
IFT20-207ENST00000578547 CAP1Q01518 475 aa13.98□□□□□ -0.17
IFT20-207ENST00000578547 GUCY1B3Q02153 619 aa13.98□□□□□ -0.17
IFT20-207ENST00000578547 TRAF1Q13077 416 aa13.98□□□□□ -0.17
IFT20-207ENST00000578547 TRIM29Q14134 588 aa13.98□□□□□ -0.17
IFT20-207ENST00000578547 MUM1L1Q5H9M0 696 aa13.98□□□□□ -0.17
IFT20-207ENST00000578547 TYW1BQ6NUM6 668 aa13.98□□□□□ -0.17
IFT20-207ENST00000578547 PPP4R3CPQ6ZMV5 832 aa13.98□□□□□ -0.17
IFT20-207ENST00000578547 RIOX2Q8IUF8 465 aa13.98□□□□□ -0.17
IFT20-207ENST00000578547 ZNF713Q8N859 430 aaPredicted RBP13.98□□□□□ -0.17
IFT20-207ENST00000578547 ARHGAP39Q9C0H5 1083 aa13.98□□□□□ -0.17
IFT20-207ENST00000578547 PORCNQ9H237 461 aa13.98□□□□□ -0.17
IFT20-207ENST00000578547 EFCC1Q9HA90 598 aa13.98□□□□□ -0.17
IFT20-207ENST00000578547 GJB4Q9NTQ9 266 aa13.98□□□□□ -0.17
IFT20-207ENST00000578547 PNMA2Q9UL42 364 aa13.98□□□□□ -0.17
IFT20-207ENST00000578547 MRPL11Q9Y3B7 192 aaKnown RBP13.98□□□□□ -0.17
IFT20-207ENST00000578547 NFIBO00712 420 aa13.97□□□□□ -0.17
IFT20-207ENST00000578547 SLC25A27O95847 323 aa13.97□□□□□ -0.17
IFT20-207ENST00000578547 XBP1P17861 261 aa13.97□□□□□ -0.17
IFT20-207ENST00000578547 LBX1P52954 281 aa13.97□□□□□ -0.17
IFT20-207ENST00000578547 NLRP5P59047 1200 aa13.97□□□□□ -0.17
IFT20-207ENST00000578547 LACTBP83111 547 aaPredicted RBP13.97□□□□□ -0.17
IFT20-207ENST00000578547 TKFCQ3LXA3 575 aa13.97□□□□□ -0.17
IFT20-207ENST00000578547 PPP1R18Q6NYC8 613 aa13.97□□□□□ -0.17
IFT20-207ENST00000578547 CCDC148Q8NFR7 591 aa13.97□□□□□ -0.17
IFT20-207ENST00000578547 CD99L2Q8TCZ2 262 aa13.97□□□□□ -0.17
IFT20-207ENST00000578547 CCDC12Q8WUD4 166 aaPredicted RBP13.97□□□□□ -0.17
IFT20-207ENST00000578547 SHISA4Q96DD7 197 aa13.97□□□□□ -0.17
IFT20-207ENST00000578547 C8orf76Q96K31 380 aa13.97□□□□□ -0.17
IFT20-207ENST00000578547 ACAD9Q9H845 621 aa13.97□□□□□ -0.17
IFT20-207ENST00000578547 KCNJ14Q9UNX9 436 aa13.97□□□□□ -0.17
IFT20-207ENST00000578547 RBBP6Q7Z6E9 1792 aaKnown RBP13.96□□□□□ -0.17
IFT20-207ENST00000578547 COPB2P35606 906 aa13.96□□□□□ -0.17
IFT20-207ENST00000578547 PSMC4P43686 418 aa13.96□□□□□ -0.17
IFT20-207ENST00000578547 ADCY7P51828 1080 aa13.96□□□□□ -0.17
IFT20-207ENST00000578547 NSMFQ6X4W1 530 aa13.96□□□□□ -0.17
IFT20-207ENST00000578547 CHST13Q8NET6 341 aa13.96□□□□□ -0.17
IFT20-207ENST00000578547 CLEC4DQ8WXI8 215 aa13.96□□□□□ -0.17
IFT20-207ENST00000578547 TRIM47Q96LD4 638 aa13.96□□□□□ -0.17
IFT20-207ENST00000578547 SMCO2A6NFE2 343 aa13.95□□□□□ -0.18
IFT20-207ENST00000578547 H3BQV1 296 aa13.95□□□□□ -0.18
IFT20-207ENST00000578547 OPLAHO14841 1288 aa13.95□□□□□ -0.18
IFT20-207ENST00000578547 CFBP00751 764 aa13.95□□□□□ -0.18
IFT20-207ENST00000578547 MAPK4P31152 587 aa13.95□□□□□ -0.18
IFT20-207ENST00000578547 KIF22Q14807 665 aa13.95□□□□□ -0.18
IFT20-207ENST00000578547 UBE2SQ16763 222 aa13.95□□□□□ -0.18
IFT20-207ENST00000578547 IFFO2Q5TF58 517 aa13.95□□□□□ -0.18
IFT20-207ENST00000578547 KRT40Q6A162 431 aa13.95□□□□□ -0.18
IFT20-207ENST00000578547 SHCBP1Q8NEM2 672 aa13.95□□□□□ -0.18
IFT20-207ENST00000578547 ERO1AQ96HE7 468 aa13.95□□□□□ -0.18
IFT20-207ENST00000578547 MMP19Q99542 508 aa13.95□□□□□ -0.18
IFT20-207ENST00000578547 MROH8Q9H579 483 aa13.95□□□□□ -0.18
IFT20-207ENST00000578547 PSTPIP2Q9H939 334 aa13.95□□□□□ -0.18
IFT20-207ENST00000578547 C6orf50Q9HD87 102 aa13.95□□□□□ -0.18
IFT20-207ENST00000578547 SH3GLB2Q9NR46 395 aa13.95□□□□□ -0.18
IFT20-207ENST00000578547 FBXO40Q9UH90 709 aa13.95□□□□□ -0.18
IFT20-207ENST00000578547 SMCHD1A6NHR9 2005 aa13.95□□□□□ -0.18
IFT20-207ENST00000578547 ZSWIM8A7E2V4 1837 aa13.94□□□□□ -0.18
IFT20-207ENST00000578547 VPS37CA5D8V6 355 aaPredicted RBP13.94□□□□□ -0.18
IFT20-207ENST00000578547 HOXA13P31271 388 aaPredicted RBP13.94□□□□□ -0.18
IFT20-207ENST00000578547 LARP1BQ659C4 914 aaKnown RBP13.94□□□□□ -0.18
IFT20-207ENST00000578547 SLC30A10Q6XR72 485 aa13.94□□□□□ -0.18
IFT20-207ENST00000578547 GPR142Q7Z601 462 aa13.94□□□□□ -0.18
IFT20-207ENST00000578547 MCF2L2Q86YR7 1114 aa13.94□□□□□ -0.18
IFT20-207ENST00000578547 ANKRD35Q8N283 1001 aa13.94□□□□□ -0.18
IFT20-207ENST00000578547 CUL5Q93034 780 aa13.94□□□□□ -0.18
IFT20-207ENST00000578547 PHF20Q9BVI0 1012 aa13.94□□□□□ -0.18
IFT20-207ENST00000578547 IVNS1ABPQ9Y6Y0 642 aa13.94□□□□□ -0.18
IFT20-207ENST00000578547 PLXNB2O15031 1838 aa13.94□□□□□ -0.18
IFT20-207ENST00000578547 ESYT2A0FGR8 921 aa13.93□□□□□ -0.18
IFT20-207ENST00000578547 GCOM1H8Y6P7 765 aaPredicted RBP13.93□□□□□ -0.18
IFT20-207ENST00000578547 TNPO2O14787 897 aaKnown RBP13.93□□□□□ -0.18
IFT20-207ENST00000578547 POLR2MP0CAP2 368 aa13.93□□□□□ -0.18
IFT20-207ENST00000578547 FCER1AP12319 257 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms