RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 CPXCR1Q8N123 301 aa14.68□□□□□ -0.06
MKS1-206ENST00000577824 CCDC82Q8N4S0 544 aa14.68□□□□□ -0.06
MKS1-206ENST00000577824 RGS22Q8NE09 1264 aa14.68□□□□□ -0.06
MKS1-206ENST00000577824 ZNF296Q8WUU4 475 aaPredicted RBP14.68□□□□□ -0.06
MKS1-206ENST00000577824 CLEC4DQ8WXI8 215 aa14.68□□□□□ -0.06
MKS1-206ENST00000577824 SLC26A6Q9BXS9 759 aa14.68□□□□□ -0.06
MKS1-206ENST00000577824 VAT1LQ9HCJ6 419 aa14.68□□□□□ -0.06
MKS1-206ENST00000577824 RNF146Q9NTX7 359 aa14.68□□□□□ -0.06
MKS1-206ENST00000577824 BARHL2Q9NY43 387 aa14.68□□□□□ -0.06
MKS1-206ENST00000577824 V9GY48 417 aaPredicted RBP14.68□□□□□ -0.06
MKS1-206ENST00000577824 FKTNO75072 461 aa14.67□□□□□ -0.06
MKS1-206ENST00000577824 FDPSP14324 419 aaKnown RBP14.67□□□□□ -0.06
MKS1-206ENST00000577824 HMGN5P82970 282 aaKnown RBP14.67□□□□□ -0.06
MKS1-206ENST00000577824 SSRP1Q08945 709 aaKnown RBP14.67□□□□□ -0.06
MKS1-206ENST00000577824 GRB14Q14449 540 aa14.67□□□□□ -0.06
MKS1-206ENST00000577824 PLS1Q14651 629 aa14.67□□□□□ -0.06
MKS1-206ENST00000577824 GPR142Q7Z601 462 aa14.67□□□□□ -0.06
MKS1-206ENST00000577824 ERO1AQ96HE7 468 aa14.67□□□□□ -0.06
MKS1-206ENST00000577824 ACAD9Q9H845 621 aa14.67□□□□□ -0.06
MKS1-206ENST00000577824 EFCC1Q9HA90 598 aa14.67□□□□□ -0.06
MKS1-206ENST00000577824 PCDHA1Q9Y5I3 950 aa14.67□□□□□ -0.06
MKS1-206ENST00000577824 CASP8AP2Q9UKL3 1982 aa14.67□□□□□ -0.06
MKS1-206ENST00000577824 BAZ2BQ9UIF8 2168 aaKnown RBP14.66□□□□□ -0.06
MKS1-206ENST00000577824 ESYT2A0FGR8 921 aa14.66□□□□□ -0.06
MKS1-206ENST00000577824 STXBP3O00186 592 aa14.66□□□□□ -0.06
MKS1-206ENST00000577824 STRNO43815 780 aa14.66□□□□□ -0.06
MKS1-206ENST00000577824 JAK2O60674 1132 aa14.66□□□□□ -0.06
MKS1-206ENST00000577824 GNRH1P01148 92 aa14.66□□□□□ -0.06
MKS1-206ENST00000577824 FCGRTP55899 365 aa14.66□□□□□ -0.06
MKS1-206ENST00000577824 CAP1Q01518 475 aa14.66□□□□□ -0.06
MKS1-206ENST00000577824 USH1GQ495M9 461 aa14.66□□□□□ -0.06
MKS1-206ENST00000577824 MUM1L1Q5H9M0 696 aa14.66□□□□□ -0.06
MKS1-206ENST00000577824 TYW1BQ6NUM6 668 aa14.66□□□□□ -0.06
MKS1-206ENST00000577824 PLEKHH3Q7Z736 793 aa14.66□□□□□ -0.06
MKS1-206ENST00000577824 HSCBQ8IWL3 235 aa14.66□□□□□ -0.06
MKS1-206ENST00000577824 SAMD3Q8N6K7 520 aa14.66□□□□□ -0.06
MKS1-206ENST00000577824 INTS4Q96HW7 963 aaKnown RBP14.66□□□□□ -0.06
MKS1-206ENST00000577824 TRIM47Q96LD4 638 aa14.66□□□□□ -0.06
MKS1-206ENST00000577824 TRERF1Q96PN7 1200 aa14.66□□□□□ -0.06
MKS1-206ENST00000577824 SH3GLB2Q9NR46 395 aa14.66□□□□□ -0.06
MKS1-206ENST00000577824 MAP3K20Q9NYL2 800 aaKnown RBP14.66□□□□□ -0.06
MKS1-206ENST00000577824 TSKSQ9UJT2 592 aa14.66□□□□□ -0.06
MKS1-206ENST00000577824 MRPL11Q9Y3B7 192 aaKnown RBP14.66□□□□□ -0.06
MKS1-206ENST00000577824 LCTP09848 1927 aa14.66□□□□□ -0.06
MKS1-206ENST00000577824 PFASO15067 1338 aa14.66□□□□□ -0.06
MKS1-206ENST00000577824 DNAJC25-GNG10A0A024R161 153 aa14.65□□□□□ -0.06
MKS1-206ENST00000577824 hCG_1642624A0A1W2PR95 340 aa14.65□□□□□ -0.06
MKS1-206ENST00000577824 NFIBO00712 420 aa14.65□□□□□ -0.06
MKS1-206ENST00000577824 ALAS1P13196 640 aa14.65□□□□□ -0.06
MKS1-206ENST00000577824 TAL1P17542 331 aaPredicted RBP14.65□□□□□ -0.06
MKS1-206ENST00000577824 PTPREP23469 700 aa14.65□□□□□ -0.06
MKS1-206ENST00000577824 CTCFP49711 727 aaPredicted RBP14.65□□□□□ -0.06
MKS1-206ENST00000577824 HSD17B4P51659 736 aa14.65□□□□□ -0.06
MKS1-206ENST00000577824 AKAP17AQ02040 695 aaKnown RBP14.65□□□□□ -0.06
MKS1-206ENST00000577824 MORN1Q5T089 497 aa14.65□□□□□ -0.06
MKS1-206ENST00000577824 NCAPG2Q86XI2 1143 aa14.65□□□□□ -0.06
MKS1-206ENST00000577824 SOCS4Q8WXH5 440 aa14.65□□□□□ -0.06
MKS1-206ENST00000577824 WASF1Q92558 559 aa14.65□□□□□ -0.06
MKS1-206ENST00000577824 USP6NLQ92738 828 aa14.65□□□□□ -0.06
MKS1-206ENST00000577824 GPKOWQ92917 476 aaPredicted RBP eCLIP14.65□□□□□ -0.06
MKS1-206ENST00000577824 SHISA4Q96DD7 197 aa14.65□□□□□ -0.06
MKS1-206ENST00000577824 ARHGAP39Q9C0H5 1083 aa14.65□□□□□ -0.06
MKS1-206ENST00000577824 A1CFQ9NQ94 594 aaKnown RBP14.65□□□□□ -0.06
MKS1-206ENST00000577824 SMCHD1A6NHR9 2005 aa14.65□□□□□ -0.06
MKS1-206ENST00000577824 BRCA2P51587 3418 aa14.64□□□□□ -0.07
MKS1-206ENST00000577824 SLC15A5A6NIM6 579 aa14.64□□□□□ -0.07
MKS1-206ENST00000577824 PIK3CDO00329 1044 aa14.64□□□□□ -0.07
MKS1-206ENST00000577824 HOXC6P09630 235 aa14.64□□□□□ -0.07
MKS1-206ENST00000577824 PSMC4P43686 418 aa14.64□□□□□ -0.07
MKS1-206ENST00000577824 KIF22Q14807 665 aa14.64□□□□□ -0.07
MKS1-206ENST00000577824 HEATR3Q7Z4Q2 680 aa14.64□□□□□ -0.07
MKS1-206ENST00000577824 CCDC148Q8NFR7 591 aa14.64□□□□□ -0.07
MKS1-206ENST00000577824 CD99L2Q8TCZ2 262 aa14.64□□□□□ -0.07
MKS1-206ENST00000577824 CCDC12Q8WUD4 166 aaPredicted RBP14.64□□□□□ -0.07
MKS1-206ENST00000577824 PIBF1Q8WXW3 757 aa14.64□□□□□ -0.07
MKS1-206ENST00000577824 COA7Q96BR5 231 aa14.64□□□□□ -0.07
MKS1-206ENST00000577824 ZMYND12Q9H0C1 365 aa14.64□□□□□ -0.07
MKS1-206ENST00000577824 HOMER2Q9NSB8 354 aa14.64□□□□□ -0.07
MKS1-206ENST00000577824 CYP39A1Q9NYL5 469 aa14.64□□□□□ -0.07
MKS1-206ENST00000577824 ORC3Q9UBD5 711 aaPredicted RBP14.64□□□□□ -0.07
MKS1-206ENST00000577824 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.64□□□□□ -0.07
MKS1-206ENST00000577824 LRRC37A2A6NM11 1700 aa14.63□□□□□ -0.07
MKS1-206ENST00000577824 TNPO2O14787 897 aaKnown RBP14.63□□□□□ -0.07
MKS1-206ENST00000577824 FCER1AP12319 257 aa14.63□□□□□ -0.07
MKS1-206ENST00000577824 MCF2L2Q86YR7 1114 aa14.63□□□□□ -0.07
MKS1-206ENST00000577824 GLT8D2Q9H1C3 349 aa14.63□□□□□ -0.07
MKS1-206ENST00000577824 GJD2Q9UKL4 321 aa14.63□□□□□ -0.07
MKS1-206ENST00000577824 IVNS1ABPQ9Y6Y0 642 aa14.63□□□□□ -0.07
MKS1-206ENST00000577824 FRMPD4Q14CM0 1322 aa14.63□□□□□ -0.07
MKS1-206ENST00000577824 PPFIA3O75145 1194 aa14.62□□□□□ -0.07
MKS1-206ENST00000577824 IGHA2P01877 340 aa14.62□□□□□ -0.07
MKS1-206ENST00000577824 ADORA2AP29274 412 aa14.62□□□□□ -0.07
MKS1-206ENST00000577824 CLK2P49760 499 aaKnown RBP14.62□□□□□ -0.07
MKS1-206ENST00000577824 NAPAP54920 295 aa14.62□□□□□ -0.07
MKS1-206ENST00000577824 PRMT2P55345 433 aa14.62□□□□□ -0.07
MKS1-206ENST00000577824 IRF5Q13568 498 aa14.62□□□□□ -0.07
MKS1-206ENST00000577824 KCTD2Q14681 263 aa14.62□□□□□ -0.07
MKS1-206ENST00000577824 ARHGEF6Q15052 776 aa14.62□□□□□ -0.07
MKS1-206ENST00000577824 NPY5RQ15761 445 aa14.62□□□□□ -0.07
MKS1-206ENST00000577824 SLC30A10Q6XR72 485 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms