RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 CCDC69A6NI79 296 aa22.5■■□□□ 1.19
SS18-208ENST00000577751 QRICH1Q2TAL8 776 aa22.5■■□□□ 1.19
SS18-208ENST00000577751 MYL10Q9BUA6 226 aa22.5■■□□□ 1.19
SS18-208ENST00000577751 LCTP09848 1927 aa22.5■■□□□ 1.19
SS18-208ENST00000577751 POTEB2H3BUK9 544 aa22.49■■□□□ 1.19
SS18-208ENST00000577751 NFIBO00712 420 aa22.49■■□□□ 1.19
SS18-208ENST00000577751 CYTH3O43739 400 aa22.49■■□□□ 1.19
SS18-208ENST00000577751 LHX8Q68G74 356 aa22.49■■□□□ 1.19
SS18-208ENST00000577751 NFXL1Q6ZNB6 911 aa22.49■■□□□ 1.19
SS18-208ENST00000577751 NUP133Q8WUM0 1156 aa22.49■■□□□ 1.19
SS18-208ENST00000577751 TCEANC2Q96MN5 208 aa22.49■■□□□ 1.19
SS18-208ENST00000577751 NRBP1Q9UHY1 535 aa22.49■■□□□ 1.19
SS18-208ENST00000577751 FRMPD3Q5JV73 1810 aa22.49■■□□□ 1.19
SS18-208ENST00000577751 SYNGAP1Q96PV0 1343 aa22.49■■□□□ 1.19
SS18-208ENST00000577751 SOWAHBA6NEL2 793 aa22.48■■□□□ 1.19
SS18-208ENST00000577751 DHX16O60231 1041 aaKnown RBP22.48■■□□□ 1.19
SS18-208ENST00000577751 TFRCP02786 760 aaKnown RBP22.48■■□□□ 1.19
SS18-208ENST00000577751 SMARCA1P28370 1054 aa22.48■■□□□ 1.19
SS18-208ENST00000577751 CNTN2Q02246 1040 aa22.48■■□□□ 1.19
SS18-208ENST00000577751 PRAMEF19Q5SWL8 479 aa22.48■■□□□ 1.19
SS18-208ENST00000577751 UBE2Q1Q7Z7E8 422 aa22.48■■□□□ 1.19
SS18-208ENST00000577751 FBXO11Q86XK2 927 aa22.48■■□□□ 1.19
SS18-208ENST00000577751 JAKMIP1Q96N16 626 aaKnown RBP22.48■■□□□ 1.19
SS18-208ENST00000577751 OGDHLQ9ULD0 1010 aa22.48■■□□□ 1.19
SS18-208ENST00000577751 SLC12A7Q9Y666 1083 aa22.48■■□□□ 1.19
SS18-208ENST00000577751 MKI67P46013 3256 aaKnown RBP22.47■■□□□ 1.19
SS18-208ENST00000577751 ZBTB5O15062 677 aa22.47■■□□□ 1.19
SS18-208ENST00000577751 SNAI1O95863 264 aaPredicted RBP22.47■■□□□ 1.19
SS18-208ENST00000577751 CALM1P0DP23 149 aa22.47■■□□□ 1.19
SS18-208ENST00000577751 CALM2P0DP24 149 aa22.47■■□□□ 1.19
SS18-208ENST00000577751 CALM3P0DP25 149 aa22.47■■□□□ 1.19
SS18-208ENST00000577751 KIF5BP33176 963 aa22.47■■□□□ 1.19
SS18-208ENST00000577751 USH1GQ495M9 461 aa22.47■■□□□ 1.19
SS18-208ENST00000577751 NSMFQ6X4W1 530 aa22.47■■□□□ 1.19
SS18-208ENST00000577751 RGS22Q8NE09 1264 aa22.47■■□□□ 1.19
SS18-208ENST00000577751 CTCFLQ8NI51 663 aaPredicted RBP22.47■■□□□ 1.19
SS18-208ENST00000577751 MAF1Q9H063 256 aa22.47■■□□□ 1.19
SS18-208ENST00000577751 DDX20Q9UHI6 824 aaKnown RBP22.47■■□□□ 1.19
SS18-208ENST00000577751 BAZ2BQ9UIF8 2168 aaKnown RBP22.47■■□□□ 1.19
SS18-208ENST00000577751 ABCB11O95342 1321 aa22.47■■□□□ 1.19
SS18-208ENST00000577751 MCM3APO60318 1980 aa22.47■■□□□ 1.19
SS18-208ENST00000577751 SEPT4O43236 478 aa22.46■■□□□ 1.19
SS18-208ENST00000577751 MSCO60682 206 aa22.46■■□□□ 1.19
SS18-208ENST00000577751 CPA1P15085 419 aa22.46■■□□□ 1.19
SS18-208ENST00000577751 CNGA1P29973 690 aa22.46■■□□□ 1.19
SS18-208ENST00000577751 BAATQ14032 418 aaPredicted RBP22.46■■□□□ 1.19
SS18-208ENST00000577751 BLOC1S2Q6QNY1 142 aa22.46■■□□□ 1.19
SS18-208ENST00000577751 FBXL16Q8N461 479 aa22.46■■□□□ 1.19
SS18-208ENST00000577751 ANKLE1Q8NAG6 615 aa22.46■■□□□ 1.19
SS18-208ENST00000577751 ASTN1O14525 1302 aa22.46■■□□□ 1.19
SS18-208ENST00000577751 PPP1R11O60927 126 aaPredicted RBP22.45■■□□□ 1.18
SS18-208ENST00000577751 ZNF865P0CJ78 1059 aaPredicted RBP22.45■■□□□ 1.18
SS18-208ENST00000577751 PSMA5P28066 241 aa22.45■■□□□ 1.18
SS18-208ENST00000577751 GNAQP50148 359 aa22.45■■□□□ 1.18
SS18-208ENST00000577751 APOA5Q6Q788 366 aa22.45■■□□□ 1.18
SS18-208ENST00000577751 RNF207Q6ZRF8 634 aa22.45■■□□□ 1.18
SS18-208ENST00000577751 FANCBQ8NB91 859 aa22.45■■□□□ 1.18
SS18-208ENST00000577751 PIGSQ96S52 555 aa22.45■■□□□ 1.18
SS18-208ENST00000577751 LZTS2Q9BRK4 669 aa22.45■■□□□ 1.18
SS18-208ENST00000577751 SPZ1Q9BXG8 430 aa22.45■■□□□ 1.18
SS18-208ENST00000577751 AMNQ9BXJ7 453 aa22.45■■□□□ 1.18
SS18-208ENST00000577751 BRPF3Q9ULD4 1205 aa22.45■■□□□ 1.18
SS18-208ENST00000577751 RXRAP19793 462 aa22.44■■□□□ 1.18
SS18-208ENST00000577751 RPS6KB1P23443 525 aa22.44■■□□□ 1.18
SS18-208ENST00000577751 MNX1P50219 401 aaPredicted RBP22.44■■□□□ 1.18
SS18-208ENST00000577751 RPS6P62753 249 aaKnown RBP22.44■■□□□ 1.18
SS18-208ENST00000577751 AGXT2Q9BYV1 514 aa22.44■■□□□ 1.18
SS18-208ENST00000577751 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.44■■□□□ 1.18
SS18-208ENST00000577751 MRPL11Q9Y3B7 192 aaKnown RBP22.44■■□□□ 1.18
SS18-208ENST00000577751 PNMA6FA0A0J9YX94 578 aa22.43■■□□□ 1.18
SS18-208ENST00000577751 PTPDC1A2A3K4 754 aa22.43■■□□□ 1.18
SS18-208ENST00000577751 SLC30A10Q6XR72 485 aa22.43■■□□□ 1.18
SS18-208ENST00000577751 SYNE3Q6ZMZ3 975 aa22.43■■□□□ 1.18
SS18-208ENST00000577751 Q6ZUG5 572 aa22.43■■□□□ 1.18
SS18-208ENST00000577751 ARMCX2Q7L311 632 aa22.43■■□□□ 1.18
SS18-208ENST00000577751 HOMER1Q86YM7 354 aa22.43■■□□□ 1.18
SS18-208ENST00000577751 CCDC144CPQ8IYA2 1237 aa22.43■■□□□ 1.18
SS18-208ENST00000577751 SRBD1Q8N5C6 995 aaKnown RBP22.43■■□□□ 1.18
SS18-208ENST00000577751 MORC4Q8TE76 937 aa22.43■■□□□ 1.18
SS18-208ENST00000577751 PURBQ96QR8 312 aaKnown RBP22.43■■□□□ 1.18
SS18-208ENST00000577751 TM6SF1Q9BZW5 370 aa22.43■■□□□ 1.18
SS18-208ENST00000577751 KATNBL1Q9H079 304 aa22.43■■□□□ 1.18
SS18-208ENST00000577751 ABHD16BQ9H3Z7 469 aa22.43■■□□□ 1.18
SS18-208ENST00000577751 ZSWIM6Q9HCJ5 1215 aa22.43■■□□□ 1.18
SS18-208ENST00000577751 CNPY2Q9Y2B0 182 aa22.43■■□□□ 1.18
SS18-208ENST00000577751 LOC102724159A0A0B4J2E5 919 aa22.42■■□□□ 1.18
SS18-208ENST00000577751 ASB14A6NK59 587 aa22.42■■□□□ 1.18
SS18-208ENST00000577751 EIF5BO60841 1220 aaKnown RBP22.42■■□□□ 1.18
SS18-208ENST00000577751 FARP2O94887 1054 aaPredicted RBP22.42■■□□□ 1.18
SS18-208ENST00000577751 PLEKHA8P1O95397 391 aa22.42■■□□□ 1.18
SS18-208ENST00000577751 CASTP20810 708 aaKnown RBP22.42■■□□□ 1.18
SS18-208ENST00000577751 RCAN1P53805 252 aa22.42■■□□□ 1.18
SS18-208ENST00000577751 PWP2Q15269 919 aaKnown RBP22.42■■□□□ 1.18
SS18-208ENST00000577751 MICU3Q86XE3 530 aa22.42■■□□□ 1.18
SS18-208ENST00000577751 RAB11FIP4Q86YS3 637 aa22.42■■□□□ 1.18
SS18-208ENST00000577751 TBC1D5Q92609 795 aa22.42■■□□□ 1.18
SS18-208ENST00000577751 ADD3Q9UEY8 706 aaKnown RBP22.42■■□□□ 1.18
SS18-208ENST00000577751 TNRC18O15417 2968 aaPredicted RBP22.42■■□□□ 1.18
SS18-208ENST00000577751 OPLAHO14841 1288 aa22.41■■□□□ 1.18
SS18-208ENST00000577751 CALML3P27482 149 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms