RNA–Protein interactions for RNA: ENST00000577052.5

ABR-236, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-236ENST00000577052 VPS53Q5VIR6 699 aa20.31■□□□□ 0.84
ABR-236ENST00000577052 RASGRP2Q7LDG7 609 aa20.31■□□□□ 0.84
ABR-236ENST00000577052 CCDC144CPQ8IYA2 1237 aa20.31■□□□□ 0.84
ABR-236ENST00000577052 GMCL1P1Q8NEA9 526 aa20.31■□□□□ 0.84
ABR-236ENST00000577052 ABHD16BQ9H3Z7 469 aa20.31■□□□□ 0.84
ABR-236ENST00000577052 FEM1BQ9UK73 627 aa20.31■□□□□ 0.84
ABR-236ENST00000577052 ELP1O95163 1332 aa20.3■□□□□ 0.84
ABR-236ENST00000577052 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.3■□□□□ 0.84
ABR-236ENST00000577052 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.3■□□□□ 0.84
ABR-236ENST00000577052 SOWAHBA6NEL2 793 aa20.3■□□□□ 0.84
ABR-236ENST00000577052 PBX2P40425 430 aa20.3■□□□□ 0.84
ABR-236ENST00000577052 TDO2P48775 406 aa20.3■□□□□ 0.84
ABR-236ENST00000577052 NKX3-2P78367 333 aa20.3■□□□□ 0.84
ABR-236ENST00000577052 SLFN13Q68D06 897 aa20.3■□□□□ 0.84
ABR-236ENST00000577052 MFSD5Q6N075 450 aa20.3■□□□□ 0.84
ABR-236ENST00000577052 FAM126BQ8IXS8 530 aa20.3■□□□□ 0.84
ABR-236ENST00000577052 ANKRD35Q8N283 1001 aa20.3■□□□□ 0.84
ABR-236ENST00000577052 FAM133AQ8N9E0 248 aa20.3■□□□□ 0.84
ABR-236ENST00000577052 CHST13Q8NET6 341 aa20.3■□□□□ 0.84
ABR-236ENST00000577052 NEDD1Q8NHV4 660 aa20.3■□□□□ 0.84
ABR-236ENST00000577052 CHMP4CQ96CF2 233 aa20.3■□□□□ 0.84
ABR-236ENST00000577052 PATL2C9JE40 543 aaKnown RBP20.29■□□□□ 0.84
ABR-236ENST00000577052 TTLL1O95922 423 aa20.29■□□□□ 0.84
ABR-236ENST00000577052 CSF2RAP15509 400 aa20.29■□□□□ 0.84
ABR-236ENST00000577052 BEX3Q00994 111 aa20.29■□□□□ 0.84
ABR-236ENST00000577052 TMEM63BQ5T3F8 832 aa20.29■□□□□ 0.84
ABR-236ENST00000577052 ZNF444Q8N0Y2 327 aaPredicted RBP20.29■□□□□ 0.84
ABR-236ENST00000577052 MAP4K1Q92918 833 aa20.29■□□□□ 0.84
ABR-236ENST00000577052 AGBL1Q96MI9 1066 aa20.29■□□□□ 0.84
ABR-236ENST00000577052 GLT1D1Q96MS3 346 aa20.29■□□□□ 0.84
ABR-236ENST00000577052 INCENPQ9NQS7 918 aa20.29■□□□□ 0.84
ABR-236ENST00000577052 PRDM6Q9NQX0 595 aa20.29■□□□□ 0.84
ABR-236ENST00000577052 HOMER2Q9NSB8 354 aa20.29■□□□□ 0.84
ABR-236ENST00000577052 SYNPO2Q9UMS6 1093 aa20.29■□□□□ 0.84
ABR-236ENST00000577052 RBM8AQ9Y5S9 174 aaKnown RBP20.29■□□□□ 0.84
ABR-236ENST00000577052 MYO9BQ13459 2157 aa20.28■□□□□ 0.84
ABR-236ENST00000577052 TMEM232C9JQI7 657 aa20.28■□□□□ 0.84
ABR-236ENST00000577052 ARVCFO00192 962 aa20.28■□□□□ 0.84
ABR-236ENST00000577052 CD4P01730 458 aa20.28■□□□□ 0.84
ABR-236ENST00000577052 ACRP10323 421 aa20.28■□□□□ 0.84
ABR-236ENST00000577052 BMP3P12645 472 aa20.28■□□□□ 0.84
ABR-236ENST00000577052 HSPA4P34932 840 aa20.28■□□□□ 0.84
ABR-236ENST00000577052 OAZ1P54368 228 aa20.28■□□□□ 0.84
ABR-236ENST00000577052 SNAP25P60880 206 aa20.28■□□□□ 0.84
ABR-236ENST00000577052 GNASQ5JWF2 1037 aa20.28■□□□□ 0.84
ABR-236ENST00000577052 KIF2CQ99661 725 aa20.28■□□□□ 0.84
ABR-236ENST00000577052 DSCC1Q9BVC3 393 aa20.28■□□□□ 0.84
ABR-236ENST00000577052 ZNF576Q9H609 170 aa20.28■□□□□ 0.84
ABR-236ENST00000577052 A1CFQ9NQ94 594 aaKnown RBP20.28■□□□□ 0.84
ABR-236ENST00000577052 GNEQ9Y223 722 aaKnown RBP20.28■□□□□ 0.84
ABR-236ENST00000577052 GRIN2DO15399 1336 aa20.27■□□□□ 0.84
ABR-236ENST00000577052 LAMA4Q16363 1823 aa20.27■□□□□ 0.84
ABR-236ENST00000577052 CHD9Q3L8U1 2897 aa20.27■□□□□ 0.84
ABR-236ENST00000577052 A0A0U1RQG5 324 aaPredicted RBP20.27■□□□□ 0.84
ABR-236ENST00000577052 APPP05067 770 aa20.27■□□□□ 0.84
ABR-236ENST00000577052 HSPD1P10809 573 aaKnown RBP20.27■□□□□ 0.84
ABR-236ENST00000577052 GNAT2P19087 354 aa20.27■□□□□ 0.84
ABR-236ENST00000577052 PCSK9Q8NBP7 692 aaKnown RBP20.27■□□□□ 0.84
ABR-236ENST00000577052 TIFAQ96CG3 184 aa20.27■□□□□ 0.84
ABR-236ENST00000577052 PBX4Q9BYU1 374 aa20.27■□□□□ 0.84
ABR-236ENST00000577052 PPP1R12CQ9BZL4 782 aa20.27■□□□□ 0.84
ABR-236ENST00000577052 FBXO40Q9UH90 709 aa20.27■□□□□ 0.84
ABR-236ENST00000577052 MUC3AQ02505 3323 aa20.27■□□□□ 0.84
ABR-236ENST00000577052 UMODL1Q5DID0 1318 aa20.27■□□□□ 0.83
ABR-236ENST00000577052 CYP2C18P33260 490 aa20.26■□□□□ 0.83
ABR-236ENST00000577052 TFAP4Q01664 338 aa20.26■□□□□ 0.83
ABR-236ENST00000577052 NECTIN1Q15223 517 aa20.26■□□□□ 0.83
ABR-236ENST00000577052 ZNF365Q70YC5 407 aa20.26■□□□□ 0.83
ABR-236ENST00000577052 SLC43A3Q8NBI5 491 aa20.26■□□□□ 0.83
ABR-236ENST00000577052 VWCEQ96DN2 955 aa20.26■□□□□ 0.83
ABR-236ENST00000577052 PURBQ96QR8 312 aaKnown RBP20.26■□□□□ 0.83
ABR-236ENST00000577052 IL17RBQ9NRM6 502 aa20.26■□□□□ 0.83
ABR-236ENST00000577052 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.26■□□□□ 0.83
ABR-236ENST00000577052 GBF1Q92538 1859 aa20.26■□□□□ 0.83
ABR-236ENST00000577052 NMT2O60551 498 aa20.25■□□□□ 0.83
ABR-236ENST00000577052 MCCP23508 829 aa20.25■□□□□ 0.83
ABR-236ENST00000577052 PPARAQ07869 468 aa20.25■□□□□ 0.83
ABR-236ENST00000577052 MUM1L1Q5H9M0 696 aa20.25■□□□□ 0.83
ABR-236ENST00000577052 CXCL17Q6UXB2 119 aa20.25■□□□□ 0.83
ABR-236ENST00000577052 IL17RAQ96F46 866 aa20.25■□□□□ 0.83
ABR-236ENST00000577052 ACAD9Q9H845 621 aa20.25■□□□□ 0.83
ABR-236ENST00000577052 PDGFCQ9NRA1 345 aa20.25■□□□□ 0.83
ABR-236ENST00000577052 RNF146Q9NTX7 359 aa20.25■□□□□ 0.83
ABR-236ENST00000577052 CXXC1Q9P0U4 656 aaPredicted RBP20.25■□□□□ 0.83
ABR-236ENST00000577052 CTDP1Q9Y5B0 961 aaPredicted RBP20.25■□□□□ 0.83
ABR-236ENST00000577052 U3KPZ7 1027 aaPredicted RBP20.25■□□□□ 0.83
ABR-236ENST00000577052 MROH7Q68CQ1 1323 aa20.25■□□□□ 0.83
ABR-236ENST00000577052 TSPY3P0CV98 308 aa20.24■□□□□ 0.83
ABR-236ENST00000577052 TSPY8P0CW00 308 aa20.24■□□□□ 0.83
ABR-236ENST00000577052 SMPD1P17405 629 aa20.24■□□□□ 0.83
ABR-236ENST00000577052 PPIGQ13427 754 aaKnown RBP eCLIP20.24■□□□□ 0.83
ABR-236ENST00000577052 KCTD1Q719H9 257 aa20.24■□□□□ 0.83
ABR-236ENST00000577052 STAG1Q8WVM7 1258 aa20.24■□□□□ 0.83
ABR-236ENST00000577052 KCNB2Q92953 911 aa20.24■□□□□ 0.83
ABR-236ENST00000577052 VTI1AQ96AJ9 217 aa20.24■□□□□ 0.83
ABR-236ENST00000577052 GMCL1Q96IK5 515 aa20.24■□□□□ 0.83
ABR-236ENST00000577052 STAT2P52630 851 aa20.23■□□□□ 0.83
ABR-236ENST00000577052 TNFAIP2Q03169 654 aa20.23■□□□□ 0.83
ABR-236ENST00000577052 CREB3L3Q68CJ9 461 aa20.23■□□□□ 0.83
ABR-236ENST00000577052 TAPT1Q6NXT6 567 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms