RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-216ENST00000577001 EXOC1Q9NV70 894 aa16.58■□□□□ 0.24
PRPF8-216ENST00000577001 ZNF652Q9Y2D9 606 aa16.58■□□□□ 0.24
PRPF8-216ENST00000577001 MYH15Q9Y2K3 1946 aa16.58■□□□□ 0.24
PRPF8-216ENST00000577001 CCDC66A2RUB6 948 aa16.58■□□□□ 0.24
PRPF8-216ENST00000577001 ZNF658Q5TYW1 1059 aaPredicted RBP16.58■□□□□ 0.24
PRPF8-216ENST00000577001 BSDC1Q9NW68 430 aaPredicted RBP16.58■□□□□ 0.24
PRPF8-216ENST00000577001 PODXL2Q9NZ53 605 aa16.58■□□□□ 0.24
PRPF8-216ENST00000577001 TCP10Q12799 353 aa16.57■□□□□ 0.24
PRPF8-216ENST00000577001 CASP8Q14790 479 aa16.57■□□□□ 0.24
PRPF8-216ENST00000577001 CENPHQ9H3R5 247 aa16.57■□□□□ 0.24
PRPF8-216ENST00000577001 MYH13Q9UKX3 1938 aa16.57■□□□□ 0.24
PRPF8-216ENST00000577001 WDR59Q6PJI9 974 aa16.57■□□□□ 0.24
PRPF8-216ENST00000577001 RRAGAQ7L523 313 aa16.57■□□□□ 0.24
PRPF8-216ENST00000577001 TRIML1Q8N9V2 468 aa16.57■□□□□ 0.24
PRPF8-216ENST00000577001 OR8K1Q8NGG5 319 aa16.57■□□□□ 0.24
PRPF8-216ENST00000577001 SPATA20Q8TB22 786 aa16.57■□□□□ 0.24
PRPF8-216ENST00000577001 UBE4AQ14139 1066 aa16.57■□□□□ 0.24
PRPF8-216ENST00000577001 BEND6Q5SZJ8 279 aaPredicted RBP16.57■□□□□ 0.24
PRPF8-216ENST00000577001 KCTD16Q68DU8 428 aa16.57■□□□□ 0.24
PRPF8-216ENST00000577001 NFRKBQ6P4R8 1299 aa16.57■□□□□ 0.24
PRPF8-216ENST00000577001 COG1Q8WTW3 980 aa16.57■□□□□ 0.24
PRPF8-216ENST00000577001 CTAGE1Q96RT6 745 aa16.57■□□□□ 0.24
PRPF8-216ENST00000577001 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.57■□□□□ 0.24
PRPF8-216ENST00000577001 RBM28Q9NW13 759 aaKnown RBP16.57■□□□□ 0.24
PRPF8-216ENST00000577001 C4AP0C0L4 1744 aa16.56■□□□□ 0.24
PRPF8-216ENST00000577001 C4BP0C0L5 1744 aa16.56■□□□□ 0.24
PRPF8-216ENST00000577001 ZSCAN5CA6NGD5 496 aaPredicted RBP16.56■□□□□ 0.24
PRPF8-216ENST00000577001 BTDP43251 543 aa16.56■□□□□ 0.24
PRPF8-216ENST00000577001 HSP90B2PQ58FF3 399 aa16.56■□□□□ 0.24
PRPF8-216ENST00000577001 SPTY2D1Q68D10 685 aaPredicted RBP16.56■□□□□ 0.24
PRPF8-216ENST00000577001 KCTD1Q719H9 257 aa16.56■□□□□ 0.24
PRPF8-216ENST00000577001 TEX11Q8IYF3 940 aa16.56■□□□□ 0.24
PRPF8-216ENST00000577001 CDK5RAP3Q96JB5 506 aa16.56■□□□□ 0.24
PRPF8-216ENST00000577001 EYA3Q99504 573 aa16.56■□□□□ 0.24
PRPF8-216ENST00000577001 MAD2L2Q9UI95 211 aa16.56■□□□□ 0.24
PRPF8-216ENST00000577001 PCDHA4Q9UN74 947 aa16.56■□□□□ 0.24
PRPF8-216ENST00000577001 PSMA7O14818 248 aa16.56■□□□□ 0.24
PRPF8-216ENST00000577001 KIF5BP33176 963 aa16.56■□□□□ 0.24
PRPF8-216ENST00000577001 TMTC1Q8IUR5 882 aa16.56■□□□□ 0.24
PRPF8-216ENST00000577001 RRP36Q96EU6 259 aaKnown RBP16.56■□□□□ 0.24
PRPF8-216ENST00000577001 CEP95Q96GE4 821 aa16.56■□□□□ 0.24
PRPF8-216ENST00000577001 NHEJ1Q9H9Q4 299 aaPredicted RBP16.56■□□□□ 0.24
PRPF8-216ENST00000577001 AKR1B10O60218 316 aa16.55■□□□□ 0.24
PRPF8-216ENST00000577001 UFL1O94874 794 aa16.55■□□□□ 0.24
PRPF8-216ENST00000577001 IPO7O95373 1038 aaKnown RBP16.55■□□□□ 0.24
PRPF8-216ENST00000577001 PBX1P40424 430 aa16.55■□□□□ 0.24
PRPF8-216ENST00000577001 TBC1D10BQ4KMP7 808 aaPredicted RBP16.55■□□□□ 0.24
PRPF8-216ENST00000577001 SOGA3Q5TF21 947 aa16.55■□□□□ 0.24
PRPF8-216ENST00000577001 KCNK18Q7Z418 384 aa16.55■□□□□ 0.24
PRPF8-216ENST00000577001 IKZF4Q9H2S9 585 aa16.55■□□□□ 0.24
PRPF8-216ENST00000577001 TCP11L1Q9NUJ3 509 aa16.55■□□□□ 0.24
PRPF8-216ENST00000577001 RWDD2AQ9UIY3 292 aa16.55■□□□□ 0.24
PRPF8-216ENST00000577001 PCDHAC2Q9Y5I4 1007 aa16.55■□□□□ 0.24
PRPF8-216ENST00000577001 GOLGA6L9A6NEM1 432 aa16.55■□□□□ 0.24
PRPF8-216ENST00000577001 LLGL1Q15334 1064 aa16.55■□□□□ 0.24
PRPF8-216ENST00000577001 DOK7Q18PE1 504 aa16.55■□□□□ 0.24
PRPF8-216ENST00000577001 FGFBP2Q9BYJ0 223 aa16.55■□□□□ 0.24
PRPF8-216ENST00000577001 FAM107BQ9H098 131 aa16.55■□□□□ 0.24
PRPF8-216ENST00000577001 MEIS1O00470 390 aa16.55■□□□□ 0.24
PRPF8-216ENST00000577001 CCDC42Q96M95 316 aa16.55■□□□□ 0.24
PRPF8-216ENST00000577001 FAM204AQ9H8W3 233 aa16.55■□□□□ 0.24
PRPF8-216ENST00000577001 CAPN6Q9Y6Q1 641 aa16.55■□□□□ 0.24
PRPF8-216ENST00000577001 SLC37A4O43826 429 aa16.54■□□□□ 0.24
PRPF8-216ENST00000577001 RASSF7Q02833 373 aa16.54■□□□□ 0.24
PRPF8-216ENST00000577001 ADSSL1Q8N142 457 aa16.54■□□□□ 0.24
PRPF8-216ENST00000577001 KCND1Q9NSA2 647 aa16.54■□□□□ 0.24
PRPF8-216ENST00000577001 FAM53CQ9NYF3 392 aa16.54■□□□□ 0.24
PRPF8-216ENST00000577001 SCAF8Q9UPN6 1271 aaKnown RBP16.54■□□□□ 0.24
PRPF8-216ENST00000577001 STAT3P40763 770 aa16.54■□□□□ 0.24
PRPF8-216ENST00000577001 GFPT1Q06210 699 aaPredicted RBP16.54■□□□□ 0.24
PRPF8-216ENST00000577001 IFT81Q8WYA0 676 aa16.54■□□□□ 0.24
PRPF8-216ENST00000577001 ARHGEF1Q92888 912 aaKnown RBP16.54■□□□□ 0.24
PRPF8-216ENST00000577001 DUSP9Q99956 384 aaKnown RBP16.54■□□□□ 0.24
PRPF8-216ENST00000577001 BRIP1Q9BX63 1249 aa16.54■□□□□ 0.24
PRPF8-216ENST00000577001 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.54■□□□□ 0.24
PRPF8-216ENST00000577001 GTF2IP78347 998 aa16.53■□□□□ 0.24
PRPF8-216ENST00000577001 FBXO33Q7Z6M2 555 aa16.53■□□□□ 0.24
PRPF8-216ENST00000577001 CEP112Q8N8E3 955 aa16.53■□□□□ 0.24
PRPF8-216ENST00000577001 C4orf32Q8N8J7 132 aa16.53■□□□□ 0.24
PRPF8-216ENST00000577001 ZNHIT6Q9NWK9 470 aaKnown RBP16.53■□□□□ 0.24
PRPF8-216ENST00000577001 FCHSD1Q86WN1 690 aa16.53■□□□□ 0.24
PRPF8-216ENST00000577001 SAR1BQ9Y6B6 198 aa16.53■□□□□ 0.24
PRPF8-216ENST00000577001 NUP188Q5SRE5 1749 aa16.53■□□□□ 0.24
PRPF8-216ENST00000577001 ATRNO75882 1429 aa16.53■□□□□ 0.24
PRPF8-216ENST00000577001 ZNF263O14978 683 aa16.53■□□□□ 0.24
PRPF8-216ENST00000577001 FTCDO95954 541 aa16.53■□□□□ 0.24
PRPF8-216ENST00000577001 MKRN4PQ13434 485 aaPredicted RBP16.53■□□□□ 0.24
PRPF8-216ENST00000577001 STIM1Q13586 685 aa16.53■□□□□ 0.24
PRPF8-216ENST00000577001 TRADDQ15628 312 aa16.53■□□□□ 0.24
PRPF8-216ENST00000577001 HDXQ7Z353 690 aa16.53■□□□□ 0.24
PRPF8-216ENST00000577001 KLHL34Q8N239 644 aa16.53■□□□□ 0.24
PRPF8-216ENST00000577001 CCNL1Q9UK58 526 aaPredicted RBP16.53■□□□□ 0.24
PRPF8-216ENST00000577001 TTF2Q9UNY4 1162 aaKnown RBP16.53■□□□□ 0.24
PRPF8-216ENST00000577001 ADAMTS7Q9UKP4 1686 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 PKD1L3Q7Z443 1732 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 RASSF10A6NK89 507 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 USP17L15C9J2P7 530 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 USP17L13C9JLJ4 530 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 USP17L11C9JVI0 530 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 USP17L18D6R9N7 530 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms